BLASTX nr result
ID: Coptis25_contig00000785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000785
(1653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002327843.1| predicted protein [Populus trichocarpa] gi|2... 307 e-103
ref|XP_002310462.1| predicted protein [Populus trichocarpa] gi|2... 308 e-103
ref|XP_002280408.1| PREDICTED: traB domain-containing protein is... 313 e-103
ref|XP_004151877.1| PREDICTED: traB domain-containing protein-li... 308 e-100
ref|XP_004166532.1| PREDICTED: traB domain-containing protein-li... 308 e-100
>ref|XP_002327843.1| predicted protein [Populus trichocarpa] gi|222837252|gb|EEE75631.1|
predicted protein [Populus trichocarpa]
Length = 343
Score = 307 bits (787), Expect(2) = e-103
Identities = 149/186 (80%), Positives = 170/186 (91%)
Frame = -2
Query: 1379 LPDELAKGVVLLECESSAEGGVCQVYLVGTAHVSQESCREVEAIISYLKPQVVFLELCSS 1200
LP+EL++ V++L CES AEGG C V+LVGTAHV QESCREV+A+ISYLKPQVVFLELC+S
Sbjct: 59 LPEELSRSVMVLTCESKAEGGTCVVHLVGTAHVCQESCREVQAVISYLKPQVVFLELCAS 118
Query: 1199 RVAILTPQSLQVPTLKEMIHMWRKRNTNLFGVLYSWFLAKVANKLEVFPGSEFRVAFEEA 1020
RVA+L+PQ+L+VPT+ EMI MW+K N N FG+LYSWFLAKVA+KLEVFPGSEFRVAFEEA
Sbjct: 119 RVAMLSPQNLKVPTMGEMIKMWKK-NHNTFGILYSWFLAKVADKLEVFPGSEFRVAFEEA 177
Query: 1019 MKYGGKVILGDRPVQITLRRTWGKMTLWHKVKFLYSMLFQAMFLPSPEDLNKMLKEMDDV 840
KY GKV+LGDRPVQITLRRTWGKM +WHKVKFLYS+LFQA+FLPS EDL KMLKEMDDV
Sbjct: 178 RKYEGKVVLGDRPVQITLRRTWGKMPVWHKVKFLYSLLFQALFLPSSEDLEKMLKEMDDV 237
Query: 839 DMLTLV 822
DMLTLV
Sbjct: 238 DMLTLV 243
Score = 97.1 bits (240), Expect(2) = e-103
Identities = 44/64 (68%), Positives = 58/64 (90%)
Frame = -3
Query: 718 VVAVVGRGHLQGIKKHWKQPIEVKDLLEIPARKSGVSAMRIITSLGVAIAGVAIVSGIYI 539
VVAVVG+GHLQGIK+HW+Q IE+KDL+E+P++KS VSA +++ SLGVA+AGVAIVSGIY+
Sbjct: 280 VVAVVGKGHLQGIKRHWEQHIELKDLMELPSQKSAVSAWKVLASLGVAVAGVAIVSGIYL 339
Query: 538 GGKR 527
K+
Sbjct: 340 SRKK 343
>ref|XP_002310462.1| predicted protein [Populus trichocarpa] gi|222853365|gb|EEE90912.1|
predicted protein [Populus trichocarpa]
Length = 290
Score = 308 bits (789), Expect(2) = e-103
Identities = 148/186 (79%), Positives = 171/186 (91%)
Frame = -2
Query: 1379 LPDELAKGVVLLECESSAEGGVCQVYLVGTAHVSQESCREVEAIISYLKPQVVFLELCSS 1200
LP+EL++ V++L CES AEGG C V+LVGTAHVSQESCREV+A++SYLKPQVVFLELC+S
Sbjct: 6 LPEELSRSVMVLTCESKAEGGTCVVHLVGTAHVSQESCREVQAVVSYLKPQVVFLELCAS 65
Query: 1199 RVAILTPQSLQVPTLKEMIHMWRKRNTNLFGVLYSWFLAKVANKLEVFPGSEFRVAFEEA 1020
RVA+LTPQ+L+VPT+ EMI MW+K N N FG+LYSWFLAKV++KLEVFPGSEFRVAFEEA
Sbjct: 66 RVAVLTPQNLKVPTMGEMIEMWKK-NHNAFGILYSWFLAKVSDKLEVFPGSEFRVAFEEA 124
Query: 1019 MKYGGKVILGDRPVQITLRRTWGKMTLWHKVKFLYSMLFQAMFLPSPEDLNKMLKEMDDV 840
KY GKV+LGDRPVQITL+RTWGKM LWHKVK LYS+LFQA+FLPS EDL+KMLKEMDDV
Sbjct: 125 RKYEGKVVLGDRPVQITLQRTWGKMPLWHKVKLLYSLLFQALFLPSSEDLDKMLKEMDDV 184
Query: 839 DMLTLV 822
DMLTLV
Sbjct: 185 DMLTLV 190
Score = 96.3 bits (238), Expect(2) = e-103
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = -3
Query: 718 VVAVVGRGHLQGIKKHWKQPIEVKDLLEIPARKSGVSAMRIITSLGVAIAGVAIVSGIYI 539
VVAVVG+GHLQGIKKHW QP E+KDL+EIP++K VSA +++ SLGVA+AGVAIVSG Y+
Sbjct: 227 VVAVVGKGHLQGIKKHWGQPFEMKDLMEIPSQKPAVSARKVLASLGVAVAGVAIVSGFYL 286
Query: 538 GGKR 527
K+
Sbjct: 287 SRKK 290
>ref|XP_002280408.1| PREDICTED: traB domain-containing protein isoform 1 [Vitis vinifera]
gi|297739309|emb|CBI28960.3| unnamed protein product
[Vitis vinifera]
Length = 433
Score = 313 bits (803), Expect(2) = e-103
Identities = 160/235 (68%), Positives = 184/235 (78%), Gaps = 5/235 (2%)
Frame = -2
Query: 1511 FIH--NMENDRKPETPI---PDDFVHVTIXXXXXXXXXXXXXXXXXXXVLPDELAKGVVL 1347
F+H N + D P I P+DFV V VLP+EL++ VV+
Sbjct: 100 FVHVDNPDLDPIPNPNIETSPEDFVSVDDRQHDVASLNAEAEGSDRNRVLPEELSRSVVM 159
Query: 1346 LECESSAEGGVCQVYLVGTAHVSQESCREVEAIISYLKPQVVFLELCSSRVAILTPQSLQ 1167
L CESSAEGG C VYLVGTAHVSQESCREV+A+ISYLKP+ VFLELCSSRVA+LTPQSL+
Sbjct: 160 LSCESSAEGGTCDVYLVGTAHVSQESCREVQAVISYLKPEAVFLELCSSRVAVLTPQSLK 219
Query: 1166 VPTLKEMIHMWRKRNTNLFGVLYSWFLAKVANKLEVFPGSEFRVAFEEAMKYGGKVILGD 987
VPT+ EMI MW+K N NL G+LYSWFLAKVAN+LEVFPG+EFRVA+EEAMKYGGKV+LGD
Sbjct: 220 VPTMSEMIDMWKK-NHNLLGILYSWFLAKVANRLEVFPGAEFRVAYEEAMKYGGKVMLGD 278
Query: 986 RPVQITLRRTWGKMTLWHKVKFLYSMLFQAMFLPSPEDLNKMLKEMDDVDMLTLV 822
RP+ ITLRRTWGKM LWHK K LY++ FQA FLPS EDLNKM+KEMD+VDMLTLV
Sbjct: 279 RPINITLRRTWGKMPLWHKAKLLYTITFQAFFLPSQEDLNKMMKEMDNVDMLTLV 333
Score = 89.4 bits (220), Expect(2) = e-103
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = -3
Query: 718 VVAVVGRGHLQGIKKHWKQPIEVKDLLEIPARKSGVSAMRIITSLGVAIAGVAIVSGIYI 539
VVAVVG+GHLQGIKK+W+QPI++ LLE P+ VSA++I+TSLG A+AGVAI+SGIY+
Sbjct: 370 VVAVVGKGHLQGIKKNWQQPIQITSLLEPPSHSPAVSAVKILTSLGAAVAGVAIISGIYL 429
Query: 538 GGKR 527
K+
Sbjct: 430 AVKK 433
>ref|XP_004151877.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
Length = 415
Score = 308 bits (789), Expect(2) = e-100
Identities = 143/186 (76%), Positives = 171/186 (91%)
Frame = -2
Query: 1379 LPDELAKGVVLLECESSAEGGVCQVYLVGTAHVSQESCREVEAIISYLKPQVVFLELCSS 1200
LP+EL++ V++L CE++ EGG+C VYLVGTAHVSQESCREV+A+ISYLKPQVVFLELC+S
Sbjct: 132 LPEELSRSVLVLTCETTGEGGICDVYLVGTAHVSQESCREVQAVISYLKPQVVFLELCAS 191
Query: 1199 RVAILTPQSLQVPTLKEMIHMWRKRNTNLFGVLYSWFLAKVANKLEVFPGSEFRVAFEEA 1020
RVA+LTPQ+L+VPT+ EM+ MW+K++ N+FG+LYSWFLAKVANKLEVFPGSEFRVA+EEA
Sbjct: 192 RVAVLTPQNLKVPTMGEMVEMWKKKH-NIFGILYSWFLAKVANKLEVFPGSEFRVAYEEA 250
Query: 1019 MKYGGKVILGDRPVQITLRRTWGKMTLWHKVKFLYSMLFQAMFLPSPEDLNKMLKEMDDV 840
MKY GKVILGDRPVQIT+RR W KM LWHK+K LYS +FQA FLPSPE+L KMLK+MDDV
Sbjct: 251 MKYRGKVILGDRPVQITIRRAWAKMPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDV 310
Query: 839 DMLTLV 822
DMLTL+
Sbjct: 311 DMLTLI 316
Score = 84.3 bits (207), Expect(2) = e-100
Identities = 38/64 (59%), Positives = 55/64 (85%)
Frame = -3
Query: 718 VVAVVGRGHLQGIKKHWKQPIEVKDLLEIPARKSGVSAMRIITSLGVAIAGVAIVSGIYI 539
VVAVVG+GHL GIKK+W+QP+ ++DLLE+P +K GV ++I +S+GVA+AGVAI+SG+Y+
Sbjct: 353 VVAVVGKGHLSGIKKNWQQPVTLEDLLEMPTQK-GVPVVKIFSSIGVAVAGVAIISGVYL 411
Query: 538 GGKR 527
K+
Sbjct: 412 ACKK 415
>ref|XP_004166532.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
Length = 415
Score = 308 bits (789), Expect(2) = e-100
Identities = 143/186 (76%), Positives = 171/186 (91%)
Frame = -2
Query: 1379 LPDELAKGVVLLECESSAEGGVCQVYLVGTAHVSQESCREVEAIISYLKPQVVFLELCSS 1200
LP+EL++ V++L CE++ EGG+C VYLVGTAHVSQESCREV+A+ISYLKPQVVFLELC+S
Sbjct: 132 LPEELSRSVLVLTCETTGEGGICDVYLVGTAHVSQESCREVQAVISYLKPQVVFLELCAS 191
Query: 1199 RVAILTPQSLQVPTLKEMIHMWRKRNTNLFGVLYSWFLAKVANKLEVFPGSEFRVAFEEA 1020
RVA+LTPQ+L+VPT+ EM+ MW+K++ N+FG+LYSWFLAKVANKLEVFPGSEFRVA+EEA
Sbjct: 192 RVAVLTPQNLKVPTMGEMVEMWKKKH-NIFGILYSWFLAKVANKLEVFPGSEFRVAYEEA 250
Query: 1019 MKYGGKVILGDRPVQITLRRTWGKMTLWHKVKFLYSMLFQAMFLPSPEDLNKMLKEMDDV 840
MKY GKVILGDRPVQIT+RR W KM LWHK+K LYS +FQA FLPSPE+L KMLK+MDDV
Sbjct: 251 MKYRGKVILGDRPVQITIRRAWAKMPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDV 310
Query: 839 DMLTLV 822
DMLTL+
Sbjct: 311 DMLTLI 316
Score = 84.0 bits (206), Expect(2) = e-100
Identities = 38/64 (59%), Positives = 55/64 (85%)
Frame = -3
Query: 718 VVAVVGRGHLQGIKKHWKQPIEVKDLLEIPARKSGVSAMRIITSLGVAIAGVAIVSGIYI 539
VVAVVG+GHL GIKK+W+QP+ ++DLLE+P +K GV ++I +S+GVA+AGVAI+SG+Y+
Sbjct: 353 VVAVVGKGHLSGIKKNWQQPVTLEDLLEMPPQK-GVPVIKIFSSIGVAVAGVAIISGVYL 411
Query: 538 GGKR 527
K+
Sbjct: 412 ACKK 415