BLASTX nr result

ID: Coptis25_contig00000784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000784
         (1878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304448.1| predicted protein [Populus trichocarpa] gi|2...   689   0.0  
ref|XP_002509645.1| acc synthase, putative [Ricinus communis] gi...   686   0.0  
ref|XP_002268932.1| PREDICTED: probable aminotransferase ACS12-l...   674   0.0  
emb|CAN66821.1| hypothetical protein VITISV_003497 [Vitis vinifera]   674   0.0  
gb|AAQ88100.1| 1-aminocyclopropane-1-carboxylate synthase [Rosa ...   661   0.0  

>ref|XP_002304448.1| predicted protein [Populus trichocarpa] gi|222841880|gb|EEE79427.1|
            predicted protein [Populus trichocarpa]
          Length = 551

 Score =  689 bits (1777), Expect = 0.0
 Identities = 346/525 (65%), Positives = 410/525 (78%), Gaps = 3/525 (0%)
 Frame = -3

Query: 1720 AMRIIVPXXXXXXXXXXXXXGSIIPCALFYFLQIYLRRNRSNNHXXXXXXXXTGHILSPS 1541
            AMR+IVP             GS+IPCALFYFLQ+YLRR   ++           +  SPS
Sbjct: 30   AMRVIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLRRKHRDDPNDQDDPARDPNAPSPS 89

Query: 1540 TSLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEDSAYYVGLKKVNED 1361
             S  +L EL+   G  R+ SR  LSPR+  GP ++S RAN IVK+ DS YYVGLKKV ED
Sbjct: 90   GSAGKLAELS---GFPRNLSRNLLSPRSPRGPVFLSGRANGIVKSGDSPYYVGLKKVLED 146

Query: 1360 PYDCVENPNGVIQLGLAENKLSLDLIHNWVLENSKSFXXXXXXXXXXXXI---ATYQPFD 1190
            PYD   NPNGVIQLG+ ENKL+LDL+  W++EN+K              I   ATYQP  
Sbjct: 147  PYDEAGNPNGVIQLGVDENKLTLDLVKEWLVENAKEAILGGGGEGEELSIGGIATYQPSH 206

Query: 1189 GLTELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYP 1010
            GLT+LKVAVAGFMS++ME  VSFNPS MVLTAGA PAIE+LSFCLAD+GNAFLVP+PYYP
Sbjct: 207  GLTQLKVAVAGFMSQIMENAVSFNPSLMVLTAGANPAIEMLSFCLADSGNAFLVPTPYYP 266

Query: 1009 GFDRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGN 830
            GFD DVKWRTGVE+IPVPCRSADNFS+SI ALDR FNQAKKRG+KVRG++ISNP+NPVGN
Sbjct: 267  GFDWDVKWRTGVEIIPVPCRSADNFSLSITALDRGFNQAKKRGLKVRGIMISNPSNPVGN 326

Query: 829  LLSRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGL 650
            LL+R+ LYSLLDFAREKNIHI+ +EIFAGSTHG+EEF SMAE+++S+  DR+RVHIVYGL
Sbjct: 327  LLNRETLYSLLDFAREKNIHIVSNEIFAGSTHGSEEFASMAELIDSDYLDRDRVHIVYGL 386

Query: 649  SKDLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANR 470
            SKDL LPGFRVGV+YS NE++LAAAKKLTRFSS+S PTQ  L+S+LSDT F+++ I  NR
Sbjct: 387  SKDLSLPGFRVGVIYSFNENVLAAAKKLTRFSSVSAPTQHLLVSLLSDTDFVQKLIKNNR 446

Query: 469  ERLRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKIN 290
            ERL++ YA FVA LK  GIEC KS GGF CWA+MS L+ SYSEKGELELWD+LLN  K+N
Sbjct: 447  ERLQKTYATFVAGLKQLGIECAKSKGGFSCWADMSELINSYSEKGELELWDKLLNTAKLN 506

Query: 289  VTPGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEICKSRS 155
            VTPGS C CIEPGWF+ CF+ L+E+DIPVVM+RI K+  +CK+ S
Sbjct: 507  VTPGSCCRCIEPGWFQFCFANLTERDIPVVMDRILKIVNVCKASS 551


>ref|XP_002509645.1| acc synthase, putative [Ricinus communis] gi|223549544|gb|EEF51032.1|
            acc synthase, putative [Ricinus communis]
          Length = 556

 Score =  686 bits (1770), Expect = 0.0
 Identities = 344/528 (65%), Positives = 415/528 (78%), Gaps = 6/528 (1%)
 Frame = -3

Query: 1720 AMRIIVPXXXXXXXXXXXXXGSIIPCALFYFLQIYLRRNRSNNHXXXXXXXXTGHILSPS 1541
            AMRIIVP             GS+IPCALFYFLQ+YL+R R+++                +
Sbjct: 32   AMRIIVPLQGVVQGRGGLFLGSVIPCALFYFLQLYLKRFRTDDEQPDSSSDDPNSHTQTA 91

Query: 1540 TSLS----QLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEDSAYYVGLKK 1373
             SLS    QL EL+   G  RS SR H+SPR+ + P YISSRAN IVK+ D  Y VGL+K
Sbjct: 92   PSLSGSEGQLMELS---GFHRSSSRNHISPRSPSRPPYISSRANGIVKSGDWVYSVGLRK 148

Query: 1372 VNEDPYDCVENPNGVIQLGLAENKLSLDLIHNWVLENSKS--FXXXXXXXXXXXXIATYQ 1199
            V EDPYD   NPNGVIQ+GLAENKL+LDL+  W++EN++                IA YQ
Sbjct: 149  VVEDPYDEFGNPNGVIQVGLAENKLNLDLVEEWLVENARGAILGGGAGEELSITGIANYQ 208

Query: 1198 PFDGLTELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSP 1019
            P DGL +LKVAVA FMS++ME++V F+PSQ+VLTAG TPAIE+LSFCLAD GNAFLVP+P
Sbjct: 209  PCDGLMKLKVAVADFMSQIMEKEVPFDPSQIVLTAGETPAIEMLSFCLADAGNAFLVPTP 268

Query: 1018 YYPGFDRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANP 839
            Y PGFDRDVKWRTGV++IPVPCRSADNF++SI ALDRAFNQAKKRG+KVRG++ SNP++P
Sbjct: 269  YCPGFDRDVKWRTGVDIIPVPCRSADNFNLSITALDRAFNQAKKRGLKVRGIIFSNPSHP 328

Query: 838  VGNLLSRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIV 659
            VGNLL+R+ LYSLLDFAREKNIHI+C+EIFAGST+GNEEFVSMAE+++ ED DR+RVHIV
Sbjct: 329  VGNLLNREALYSLLDFAREKNIHIVCNEIFAGSTYGNEEFVSMAELIDLEDSDRDRVHIV 388

Query: 658  YGLSKDLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFID 479
            Y LSKDL LPGF+VGV++S NE+++AAAKKLTRFSSIS PT R LISMLSD +F+R+ I 
Sbjct: 389  YALSKDLSLPGFKVGVIFSSNENVVAAAKKLTRFSSISAPTHRLLISMLSDIKFVRDIIQ 448

Query: 478  ANRERLRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIG 299
             NR RL+++Y  F A LK  GI+C KS+GGFYCWA+MS L+ SYSEKGELELWD+LLN  
Sbjct: 449  TNRNRLQKMYVAFAAGLKQLGIKCIKSNGGFYCWADMSELISSYSEKGELELWDKLLNSA 508

Query: 298  KINVTPGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEICKSRS 155
            K+N TPGSSCHCIEPGWF  CF+TL+E+DIPVVM+RIRK++E CKS S
Sbjct: 509  KLNATPGSSCHCIEPGWFGFCFTTLTERDIPVVMDRIRKIAETCKSLS 556


>ref|XP_002268932.1| PREDICTED: probable aminotransferase ACS12-like [Vitis vinifera]
          Length = 503

 Score =  674 bits (1740), Expect = 0.0
 Identities = 334/516 (64%), Positives = 410/516 (79%), Gaps = 1/516 (0%)
 Frame = -3

Query: 1717 MRIIVPXXXXXXXXXXXXXGSIIPCALFYFLQIYLRRNRSNNHXXXXXXXXTGHILSPST 1538
            MR+IVP             GS+IP AL+YF Q+YL+R RS                SPS+
Sbjct: 1    MRLIVPLQGVVQGRGGLILGSVIPGALYYFFQLYLKRCRSAKPNSNPP--------SPSS 52

Query: 1537 SLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEDSAYYVGLKKVNEDP 1358
            S +QL +L+      RS SR++LS R S GP  +S+RANSI K   S YY+GL++ +EDP
Sbjct: 53   SSAQLADLS------RSSSRSNLSSRGSVGPVRVSARANSIAKPNASPYYIGLERASEDP 106

Query: 1357 YDCVENPNGVIQLGLAENKLSLDLIHNWVLEN-SKSFXXXXXXXXXXXXIATYQPFDGLT 1181
            YD  +NP+G++QLGL+EN+LSLDLI  W+LEN  +S             IATYQP DG+ 
Sbjct: 107  YDRFDNPDGIMQLGLSENRLSLDLIETWILENLERSMIGGADGNLNISGIATYQPLDGMM 166

Query: 1180 ELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGFD 1001
            E+K+AVAGFMS+VM   VSF+PS++VLT+GATPAIE L FCLAD GNAFLVP+PYYPGFD
Sbjct: 167  EMKIAVAGFMSQVMGTTVSFDPSRLVLTSGATPAIETLCFCLADQGNAFLVPTPYYPGFD 226

Query: 1000 RDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLLS 821
            RD+KWRTGVELIPV CRS+DNF++S+ ALD+AFNQA+KRG +VRG+LISNP+NP+GN+L+
Sbjct: 227  RDMKWRTGVELIPVHCRSSDNFALSVTALDQAFNQARKRGQRVRGILISNPSNPIGNMLN 286

Query: 820  RDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSKD 641
            ++ LYSLLDFAREKNIHII DEIFAGST+G+EEFVSMAEILESEDFD++RVHI+YGLSKD
Sbjct: 287  KETLYSLLDFAREKNIHIISDEIFAGSTYGSEEFVSMAEILESEDFDKDRVHIIYGLSKD 346

Query: 640  LCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRERL 461
            L LPGFRVGV+YS N S+LAAAKKL RFSS+S PTQR LISMLSDTRFI+ +I+  RER+
Sbjct: 347  LSLPGFRVGVIYSFNTSVLAAAKKLARFSSVSAPTQRILISMLSDTRFIQRYIETTRERI 406

Query: 460  RRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVTP 281
            +++Y  F A LK  GIECTKSS G YCWA+MSGL+  Y+EKGELELWD+LL IGKINVTP
Sbjct: 407  QKMYVAFAAGLKQLGIECTKSSAGLYCWADMSGLIRPYNEKGELELWDKLLKIGKINVTP 466

Query: 280  GSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSE 173
            GS+CHCIEPGWFRCCF+ L+E+DIPVV++RI++V E
Sbjct: 467  GSACHCIEPGWFRCCFTMLAEEDIPVVIKRIQRVVE 502


>emb|CAN66821.1| hypothetical protein VITISV_003497 [Vitis vinifera]
          Length = 540

 Score =  674 bits (1739), Expect = 0.0
 Identities = 334/518 (64%), Positives = 411/518 (79%), Gaps = 1/518 (0%)
 Frame = -3

Query: 1720 AMRIIVPXXXXXXXXXXXXXGSIIPCALFYFLQIYLRRNRSNNHXXXXXXXXTGHILSPS 1541
            AMR+IVP             GS+IP AL+YF Q+YL+R RS                SPS
Sbjct: 35   AMRLIVPLQGVVQGRGGLILGSVIPGALYYFFQLYLKRCRSAKPNSNPP--------SPS 86

Query: 1540 TSLSQLNELNSSTGLTRSQSRTHLSPRASTGPAYISSRANSIVKAEDSAYYVGLKKVNED 1361
            +S +QL +L+      RS SR++LS R S GP  +S+RANSI K   S YY+GL++ +ED
Sbjct: 87   SSSAQLADLS------RSSSRSNLSSRGSVGPVRVSARANSIAKPNASPYYIGLERASED 140

Query: 1360 PYDCVENPNGVIQLGLAENKLSLDLIHNWVLEN-SKSFXXXXXXXXXXXXIATYQPFDGL 1184
            PYD  +NP+G++QLGL+EN+LSLDLI  W+LEN  +S             IATYQP DG+
Sbjct: 141  PYDRFDNPDGIMQLGLSENRLSLDLIETWILENLERSMIGGADGNLNISGIATYQPLDGM 200

Query: 1183 TELKVAVAGFMSEVMERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGF 1004
             E+K+AVAGFMS+VM   VSF+PS++VLT+GATPAIE L FCLAD GNAFLVP+PYYPGF
Sbjct: 201  MEMKIAVAGFMSQVMGTTVSFDPSRLVLTSGATPAIETLCFCLADQGNAFLVPTPYYPGF 260

Query: 1003 DRDVKWRTGVELIPVPCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLL 824
            DRD+KWRTGVELIPV CRS+DNF++S+ ALD+AFNQA+KRG +VRG+LISNP+NP+GN+L
Sbjct: 261  DRDMKWRTGVELIPVHCRSSDNFALSVTALDQAFNQARKRGQRVRGILISNPSNPIGNML 320

Query: 823  SRDMLYSLLDFAREKNIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSK 644
            +++ LYSLLDFAREKNIHII DEIFAGST+G+EEFVSMAEIL SEDFD++RVHI+YGLSK
Sbjct: 321  NKETLYSLLDFAREKNIHIISDEIFAGSTYGSEEFVSMAEILGSEDFDKDRVHIIYGLSK 380

Query: 643  DLCLPGFRVGVLYSHNESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRER 464
            DL LPGFRVGV+YS N S+LAAAKKL RFSS+S PTQR LISMLSDTRFI+ +I+  RER
Sbjct: 381  DLSLPGFRVGVIYSFNTSVLAAAKKLARFSSVSAPTQRILISMLSDTRFIQRYIETTRER 440

Query: 463  LRRVYAEFVAALKNSGIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVT 284
            ++++Y  F A LK  GIECTKSS G YCWA+MSGL+  Y+EKGELELWD+LL IGKINVT
Sbjct: 441  IQKMYVAFAAGLKQLGIECTKSSAGLYCWADMSGLIRPYNEKGELELWDKLLKIGKINVT 500

Query: 283  PGSSCHCIEPGWFRCCFSTLSEKDIPVVMERIRKVSEI 170
            PGS+CHCIEPGWFRCCF+ L+E+DIPVV++RI++V E+
Sbjct: 501  PGSACHCIEPGWFRCCFTMLAEEDIPVVIKRIQRVVEL 538


>gb|AAQ88100.1| 1-aminocyclopropane-1-carboxylate synthase [Rosa hybrid cultivar]
          Length = 480

 Score =  661 bits (1706), Expect = 0.0
 Identities = 321/448 (71%), Positives = 384/448 (85%)
 Frame = -3

Query: 1498 LTRSQSRTHLSPRASTGPAYISSRANSIVKAEDSAYYVGLKKVNEDPYDCVENPNGVIQL 1319
            L RS SR+HLSPR + GP ++S RANS++K  +  YYVGL+KV EDPYD + NP+GVIQL
Sbjct: 35   LPRSMSRSHLSPR-NPGPVHVSGRANSVLKGGEPPYYVGLRKVAEDPYDELGNPDGVIQL 93

Query: 1318 GLAENKLSLDLIHNWVLENSKSFXXXXXXXXXXXXIATYQPFDGLTELKVAVAGFMSEVM 1139
            GL ENKL+LDL+ +W+LEN+K              IA YQP DGL ELK+AVAGFMS+ +
Sbjct: 94   GLDENKLALDLVRDWLLENAKD-AILGGEELGISGIACYQPSDGLMELKLAVAGFMSKAI 152

Query: 1138 ERQVSFNPSQMVLTAGATPAIEILSFCLADTGNAFLVPSPYYPGFDRDVKWRTGVELIPV 959
               V++NPSQ+VLTAGATPAIEILSFCLAD+GNAFLVP+PYYPG DRDVKWRTGVE+IPV
Sbjct: 153  GNSVTYNPSQIVLTAGATPAIEILSFCLADSGNAFLVPAPYYPGLDRDVKWRTGVEIIPV 212

Query: 958  PCRSADNFSISINALDRAFNQAKKRGMKVRGVLISNPANPVGNLLSRDMLYSLLDFAREK 779
            PCRSAD F++SI ALDRAFNQAKKRG+KVRG++ISNP+NP G+LL+R+ LY+LLDFAREK
Sbjct: 213  PCRSADKFNLSITALDRAFNQAKKRGVKVRGIIISNPSNPGGSLLTRESLYNLLDFAREK 272

Query: 778  NIHIICDEIFAGSTHGNEEFVSMAEILESEDFDRNRVHIVYGLSKDLCLPGFRVGVLYSH 599
            NIHII +E+FAGST+G+EEFVSMAEI++ ED D+NRVHIVYG+SKDL LPGFRVG +YS 
Sbjct: 273  NIHIISNELFAGSTYGSEEFVSMAEIVDLEDLDQNRVHIVYGISKDLSLPGFRVGAIYSF 332

Query: 598  NESILAAAKKLTRFSSISVPTQRFLISMLSDTRFIREFIDANRERLRRVYAEFVAALKNS 419
            N+++L AAKKLTRFSSIS P+QR LISMLSDT+F+ +FI+ NRERLR +Y  FV  LK  
Sbjct: 333  NKNVLTAAKKLTRFSSISAPSQRLLISMLSDTKFMHKFIEINRERLRGMYLRFVTGLKQL 392

Query: 418  GIECTKSSGGFYCWANMSGLMGSYSEKGELELWDRLLNIGKINVTPGSSCHCIEPGWFRC 239
            GIECTKS+GGFYCWA++SGL+ SYSEKGELELWDRLLN+GK+NVTPGSSCHCIEPGWFR 
Sbjct: 393  GIECTKSNGGFYCWADLSGLIRSYSEKGELELWDRLLNVGKLNVTPGSSCHCIEPGWFRF 452

Query: 238  CFSTLSEKDIPVVMERIRKVSEICKSRS 155
            CF+TL+EKDIPVV+ERIR ++E CKS S
Sbjct: 453  CFTTLTEKDIPVVIERIRNIAETCKSHS 480


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