BLASTX nr result

ID: Coptis25_contig00000783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000783
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription...   275   2e-71
gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]    272   1e-70
ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription...   244   5e-62
gb|ADC94857.1| DRE transcription factor 2 [Vitis pseudoreticulata]    242   2e-61
emb|CBI23500.3| unnamed protein product [Vitis vinifera]              234   4e-59

>ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
            [Vitis vinifera]
          Length = 374

 Score =  275 bits (704), Expect = 2e-71
 Identities = 164/307 (53%), Positives = 195/307 (63%), Gaps = 22/307 (7%)
 Frame = -1

Query: 1137 DYCSTSTTPMFS---TYDDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXQ-------T 988
            D+CSTSTT MFS   +  DQ+GLEQT SIGLNH+TP+              Q        
Sbjct: 77   DFCSTSTTHMFSQGFSGYDQMGLEQTRSIGLNHITPAQILQIQAQIQFQQQQQQRMAAVA 136

Query: 987  AAASFHSQKLNQIQQQKTALNFLSPKAIPMKQVGISSNPTKLYRGVRQRHWGKWVAEIRL 808
             A+S  +Q+L+Q QQQ   LNFL PKAIPMKQVG    P KLYRGVRQRHWGKWVAEIRL
Sbjct: 137  TASSIQNQRLSQWQQQHN-LNFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKWVAEIRL 195

Query: 807  PRNRTRLWLGTFETXXXXXXXXXXXXXXLRGEFARLNFPHLRHQGSL-----GDYKPLHS 643
            P+NRTRLWLGTF+T              LRGEFARLNFP+LRHQGSL     GDYKPLHS
Sbjct: 196  PKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKPLHS 255

Query: 642  SVDAKLEAICQSL----KEGNSSKPXXXXXXXXXXXXXSQASVPNVMEVVVNSCNGEMGF 475
            SVDAKL+AICQ+L    K+GNS KP              ++S      V+ NS + E GF
Sbjct: 256  SVDAKLQAICQNLAISQKQGNSGKP------GLVADAKIESSTHQAEMVLDNSSDPESGF 309

Query: 474  LGSEDIKVE---NTTTPSQSDTDVVSLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSF 304
            LG ED KVE   ++++PS SD       SSPESD+S F +FTD  WNDS+  +L K+PS 
Sbjct: 310  LGLEDCKVEISSSSSSPSPSDESSAG-SSSPESDIS-FLDFTDSQWNDSECLTLEKFPSV 367

Query: 303  DVDWEAI 283
            ++DW +I
Sbjct: 368  EIDWASI 374


>gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]
          Length = 379

 Score =  272 bits (696), Expect = 1e-70
 Identities = 163/310 (52%), Positives = 194/310 (62%), Gaps = 26/310 (8%)
 Frame = -1

Query: 1134 YCSTSTTPMFSTYD---DQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXQ-------TA 985
            +CSTSTT MFS      DQ+GLEQTGSIGLNH+TP+              Q         
Sbjct: 78   FCSTSTTHMFSQGFLGYDQMGLEQTGSIGLNHITPAQILQIQAQIQFQQQQQQRMAAVAT 137

Query: 984  AASFHSQKLNQIQQQKT----ALNFLSPKAIPMKQVGISSNPTKLYRGVRQRHWGKWVAE 817
            A+S  +Q+L+Q QQQ+      LNFL PKAIPMKQVG    P KLYRGVRQRHWGKWVAE
Sbjct: 138  ASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKWVAE 197

Query: 816  IRLPRNRTRLWLGTFETXXXXXXXXXXXXXXLRGEFARLNFPHLRHQGSL-----GDYKP 652
            IRLP+NRTRLWLGTF+T              LRGEFARLNFP+LRHQGSL     GDYKP
Sbjct: 198  IRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKP 257

Query: 651  LHSSVDAKLEAICQSL----KEGNSSKPXXXXXXXXXXXXXSQASVPNVMEVVVNSCNGE 484
            LHSSVDAKL+AICQ+L    K+GNS KP              ++S      V+ NS + E
Sbjct: 258  LHSSVDAKLQAICQNLAISQKQGNSGKP------GLVSDAKIESSTHQAEMVLDNSSDPE 311

Query: 483  MGFLGSEDIKVE---NTTTPSQSDTDVVSLVSSPESDVSKFQEFTDMPWNDSDNFSLHKY 313
             GFLG ED KVE   ++++PS SD       SSPESD+S   +FTD  WNDS+  +L K+
Sbjct: 312  SGFLGLEDCKVEISSSSSSPSPSDESSAG-SSSPESDIS-LLDFTDSQWNDSECLTLEKF 369

Query: 312  PSFDVDWEAI 283
            PS ++DW +I
Sbjct: 370  PSVEIDWASI 379


>ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
            isoform 1 [Vitis vinifera]
          Length = 367

 Score =  244 bits (622), Expect = 5e-62
 Identities = 153/304 (50%), Positives = 187/304 (61%), Gaps = 17/304 (5%)
 Frame = -1

Query: 1137 DYCSTSTTPM----FSTYDDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXQT------ 988
            D CSTSTT +    FS++D Q G E +G IGLNHLTPS                      
Sbjct: 69   DGCSTSTTHVISQGFSSHDLQ-GFEHSGPIGLNHLTPSQIHQIQAQIQLQQHHNHMPAVA 127

Query: 987  AAASFHSQKLNQIQQQKTALNFLSPKAIPMKQVGISSNPTKLYRGVRQRHWGKWVAEIRL 808
            AAASF++Q L Q QQ++ A NFLSPK IPMKQVG+   PTKLYRGVRQRHWGKWVAEIRL
Sbjct: 128  AAASFNTQNLPQWQQRQQAPNFLSPKPIPMKQVGVPPKPTKLYRGVRQRHWGKWVAEIRL 187

Query: 807  PRNRTRLWLGTFETXXXXXXXXXXXXXXLRGEFARLNFPHLRHQGS-----LGDYKPLHS 643
            P+NRTRLWLGTF+T              LRG+FARLNFP+LRHQGS      GDYKPLHS
Sbjct: 188  PKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSHIGGEFGDYKPLHS 247

Query: 642  SVDAKLEAICQSLKE-GNSSKPXXXXXXXXXXXXXSQASVPNVMEVVVNSCNGEMGFLGS 466
            SVDAKL+AICQSL E     KP             S+A  P+  + V  S +  +   GS
Sbjct: 248  SVDAKLQAICQSLAETQKQGKP------TQGKKSRSRAVAPSASQPVTVSESSTLSEQGS 301

Query: 465  EDIKVENTTTPSQSDTDVVSLVSSPESDVSKFQEFTDMPWNDS-DNFSLHKYPSFDVDWE 289
            ED KVE T++   +++D  S  SSP SD++   +  + P+  + +NF+L KYPS ++DW 
Sbjct: 302  EDCKVEPTSSSMFTESD-GSGGSSPLSDLTFPDDCEEAPFYGAWENFNLQKYPSNEIDWA 360

Query: 288  AILS 277
            AI S
Sbjct: 361  AISS 364


>gb|ADC94857.1| DRE transcription factor 2 [Vitis pseudoreticulata]
          Length = 248

 Score =  242 bits (617), Expect = 2e-61
 Identities = 138/250 (55%), Positives = 165/250 (66%), Gaps = 16/250 (6%)
 Frame = -1

Query: 984 AASFHSQKLNQIQQQKT----ALNFLSPKAIPMKQVGISSNPTKLYRGVRQRHWGKWVAE 817
           A+S  +Q+L+Q QQQ+      LNFL PKAIPMKQVG    P KLYRGVRQRHWGKWVAE
Sbjct: 7   ASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKWVAE 66

Query: 816 IRLPRNRTRLWLGTFETXXXXXXXXXXXXXXLRGEFARLNFPHLRHQGSL-----GDYKP 652
           IRLP+NRTRLWLGTF+T              LRGEFARLNFP+LRHQGSL     GDYKP
Sbjct: 67  IRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKP 126

Query: 651 LHSSVDAKLEAICQSL----KEGNSSKPXXXXXXXXXXXXXSQASVPNVMEVVVNSCNGE 484
           LHSSVDAKL+AICQ+L    K+GNS KP              ++S      V+ NS + E
Sbjct: 127 LHSSVDAKLQAICQNLAISQKQGNSGKP------GLVSDAKIESSTHQAEMVLDNSSDPE 180

Query: 483 MGFLGSEDIKVE---NTTTPSQSDTDVVSLVSSPESDVSKFQEFTDMPWNDSDNFSLHKY 313
            GFLG ED KVE   ++++PS SD       SSPESD+S F +FTD  WNDS+  +L K+
Sbjct: 181 SGFLGLEDCKVEISSSSSSPSPSDESSAG-SSSPESDIS-FLDFTDSQWNDSECLTLEKF 238

Query: 312 PSFDVDWEAI 283
           PS ++DW +I
Sbjct: 239 PSVEIDWASI 248


>emb|CBI23500.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score =  234 bits (597), Expect = 4e-59
 Identities = 141/284 (49%), Positives = 169/284 (59%), Gaps = 9/284 (3%)
 Frame = -1

Query: 1107 FSTYDDQLGLEQTGSIGLNHLTPSXXXXXXXXXXXXXXQTAAASFHSQKLNQIQQQKTAL 928
            FS YD Q+GLEQT SIGLNH+TP+                        +++Q QQQ   L
Sbjct: 32   FSGYD-QMGLEQTRSIGLNHITPAQILQI-----------------QAQIHQWQQQHN-L 72

Query: 927  NFLSPKAIPMKQVGISSNPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFETXXXXXX 748
            NFL PKAIPMKQVG    P KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTF+T      
Sbjct: 73   NFLGPKAIPMKQVGTPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAL 132

Query: 747  XXXXXXXXLRGEFARLNFPHLRHQGSL-----GDYKPLHSSVDAKLEAICQSL----KEG 595
                    LRGEFARLNFP+LRHQGSL     GDYKPLHSSVDAKL+AICQ+L    K+G
Sbjct: 133  AYDKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQG 192

Query: 594  NSSKPXXXXXXXXXXXXXSQASVPNVMEVVVNSCNGEMGFLGSEDIKVENTTTPSQSDTD 415
            NS KP                    V +  + S   +   + S      ++++PS SD  
Sbjct: 193  NSGKPGL------------------VADAKIESSTHQAEMISS------SSSSPSPSDES 228

Query: 414  VVSLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSFDVDWEAI 283
                 SSPESD+S F +FTD  WNDS+  +L K+PS ++DW +I
Sbjct: 229  SAG-SSSPESDIS-FLDFTDSQWNDSECLTLEKFPSVEIDWASI 270


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