BLASTX nr result

ID: Coptis25_contig00000771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000771
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76136.1| hypothetical protein VITISV_034276 [Vitis vinifera]   166   6e-39
ref|XP_002283659.1| PREDICTED: uncharacterized protein LOC100255...   166   8e-39
ref|XP_002307950.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-33
ref|XP_002322599.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32
ref|XP_002521033.1| conserved hypothetical protein [Ricinus comm...   142   1e-31

>emb|CAN76136.1| hypothetical protein VITISV_034276 [Vitis vinifera]
          Length = 219

 Score =  166 bits (420), Expect = 6e-39
 Identities = 105/229 (45%), Positives = 135/229 (58%), Gaps = 6/229 (2%)
 Frame = +2

Query: 125 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTNSXXXXXXXXXXX 304
           MASSDNLAS++PW FR +F DSWISEA++RDTETLT+ALQKS+S++ ++           
Sbjct: 1   MASSDNLASVDPWVFRHTFADSWISEAFARDTETLTKALQKSISNHPDNVACDTISPFLN 60

Query: 305 XXXXYVKDEQLFPTVSDPDTMVPKQQRRNNAAIISTSTTNGGRIXXXXXXXXXXXPTTFI 484
                  +    P+VS       +   +   AI   +   GG+I            TTFI
Sbjct: 61  DLLK--PETAQTPSVSGVSGSDHETAPKRRTAIPGAA---GGKITKRKSRASKRSQTTFI 115

Query: 485 AADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRIPTYAMPTLDTSSAFLL 664
            ADP+NFRQMVQQVTG+RFG   N Q     +LKP P+R GNR+    +PTLDTS  FLL
Sbjct: 116 TADPANFRQMVQQVTGVRFG---NSQLPVNPILKPEPKRPGNRL-LGCLPTLDTSE-FLL 170

Query: 665 DNNHXXXXXXXXXSQE----QPV--EGGGTGLDFATFHNFPTLESWRVM 793
           D++H         +Q     QPV  +GG TGL+F TF +FPTLESW+VM
Sbjct: 171 DHHHQQVMGPATATQGAMTFQPVVADGGATGLEFETFPSFPTLESWKVM 219


>ref|XP_002283659.1| PREDICTED: uncharacterized protein LOC100255095 [Vitis vinifera]
          Length = 219

 Score =  166 bits (419), Expect = 8e-39
 Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
 Frame = +2

Query: 125 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTNSXXXXXXXXXXX 304
           MASSDNLAS++PW FR +F DSWISEA++RDTETLT+ALQKS+S++ ++           
Sbjct: 1   MASSDNLASVDPWVFRHTFADSWISEAFARDTETLTKALQKSISNHPDNVACDTISPFLN 60

Query: 305 XXXXYVKDEQLFPTV-----SDPDTMVPKQQRRNNAAIISTSTTNGGRIXXXXXXXXXXX 469
                  +    P+V     SD +T  PK++     A+       GG+I           
Sbjct: 61  DLLK--PETAQTPSVSGVSGSDHET-APKRRTAIPGAV-------GGKITKRKSRASKRS 110

Query: 470 PTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRIPTYAMPTLDTS 649
            TTFI ADP+NFRQMVQQVTG+RFG   N Q     +LKP P+R GNR+    +PTLDTS
Sbjct: 111 QTTFITADPANFRQMVQQVTGVRFG---NSQLPVNPILKPEPKRPGNRL-LGCLPTLDTS 166

Query: 650 SAFLLDNNHXXXXXXXXXSQE----QPV--EGGGTGLDFATFHNFPTLESWRVM 793
             FLLD++H         +Q     QPV  +GG TGL+F TF +FPTLESW+VM
Sbjct: 167 E-FLLDHHHQQVMGPATATQGAMTFQPVVADGGATGLEFETFPSFPTLESWKVM 219


>ref|XP_002307950.1| predicted protein [Populus trichocarpa] gi|222853926|gb|EEE91473.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  148 bits (373), Expect = 2e-33
 Identities = 111/270 (41%), Positives = 138/270 (51%), Gaps = 47/270 (17%)
 Frame = +2

Query: 125 MASSDNLASLEPWS--FRTSFPDSWISEAYSRDTETLTRALQKSLSSN------------ 262
           MASS+NLASLEPW+  FR +FPD W+ EAY+RDTETLT+ALQKSL +N            
Sbjct: 1   MASSENLASLEPWNMMFRPNFPDFWLPEAYARDTETLTKALQKSLFNNIDDTPTDTNTDD 60

Query: 263 --TNSXXXXXXXXXXXXXXXYVKDEQLFPTV-------SDPDTMVPKQQRRNNAAIISTS 415
             TNS                   E   PT        SDP+T    +++RN   ++  +
Sbjct: 61  NSTNSFSMNETFSSNSFNPFTSLIETAPPTPTASNVSGSDPETAGATKRQRN---LVPGA 117

Query: 416 TTNGGRIXXXXXXXXXXXPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAP 595
           T   G++            TTFI ADP+NFRQMVQQVTG+RFG   N Q     VLKP P
Sbjct: 118 T---GKVSKRKTRASKRSQTTFITADPANFRQMVQQVTGVRFG---NSQVSMVPVLKPEP 171

Query: 596 QRLGNR--IPTYAMPTLDTSSAFLLDNN-----HXXXXXXXXXSQEQPVEGGG------- 733
           QR G R  + +  +PTLDT SAFLLD++     H         S   P  G G       
Sbjct: 172 QRPGGRLLVGSGYLPTLDT-SAFLLDHHQQQLQHHVVTGSTSGSSTGPDFGPGPNLFTQP 230

Query: 734 ----------TGLDFATFHNFPTLESWRVM 793
                     +GLDF TF +FPTLESW+V+
Sbjct: 231 MVGDVGVHSSSGLDFGTFSSFPTLESWKVV 260


>ref|XP_002322599.1| predicted protein [Populus trichocarpa] gi|222867229|gb|EEF04360.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  144 bits (363), Expect = 3e-32
 Identities = 107/265 (40%), Positives = 132/265 (49%), Gaps = 42/265 (15%)
 Frame = +2

Query: 125 MASSDNLASLEPWS--FRTSFPDSWISEAYSRDTETLTRALQKSL--------------- 253
           MASS+NLASLEPW+  FR S  D WISEAY+RDTETLT+ALQKSL               
Sbjct: 1   MASSENLASLEPWNMMFRPSLSDCWISEAYARDTETLTKALQKSLFNNIDDIDIPINTNT 60

Query: 254 ---SSNTNSXXXXXXXXXXXXXXXYVKDEQLFPTVS-----DPDTMVPKQQRRNNAAIIS 409
              SSN+ S                ++     PT S     DP+T    ++ RN     +
Sbjct: 61  NDNSSNSFSITETFSSNSINPFTGLIETAPPTPTPSNVSGSDPETAGVTKRHRNPVPGAT 120

Query: 410 TSTTNGGRIXXXXXXXXXXXPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKP 589
                 G++            TTFI ADP+NFRQMVQQVTG+RF    N Q     VLKP
Sbjct: 121 ------GKVSKRKSRASKRSQTTFITADPANFRQMVQQVTGVRFN---NSQVSMVPVLKP 171

Query: 590 APQRLGNRIP--TYAMPTLDTSSAFLLDNNHXXXXXXXXXSQ----------EQPV---- 721
            PQRLG R    +  +PTLDT SAFLLD++                      +QP+    
Sbjct: 172 EPQRLGGRFQGGSGCLPTLDT-SAFLLDHHQQQVVMGSASGSSPGSGPVSFTQQPMMGDV 230

Query: 722 -EGGGTGLDFATFHNFPTLESWRVM 793
             G   G+DF TF +FPTLESW+V+
Sbjct: 231 GVGSSGGIDFDTFSSFPTLESWKVV 255


>ref|XP_002521033.1| conserved hypothetical protein [Ricinus communis]
           gi|223539736|gb|EEF41317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  142 bits (357), Expect = 1e-31
 Identities = 107/267 (40%), Positives = 136/267 (50%), Gaps = 44/267 (16%)
 Frame = +2

Query: 125 MASSDNLASLEPWSFRTSFPDSWISEAYSRDTETLTRALQKSLSSNTN----SXXXXXXX 292
           MASS+NLAS EP+ FR +FPDSWISEAY+RDT+ LT+ALQKSLS+N N    S       
Sbjct: 1   MASSENLASFEPFFFRHTFPDSWISEAYARDTDALTKALQKSLSNNNNNNNNSLLEVLTS 60

Query: 293 XXXXXXXXYVKDEQ------LFPTVS-----DPDT-MVPKQQRRNNAAIISTSTTNGGRI 436
                    + + +        PT S     +P+T   P  +R+ N    +T     G+ 
Sbjct: 61  DSLINPFLNLSNSESNASPITTPTASNVSGSEPETPSAPPPKRQRNGIPAAT-----GKF 115

Query: 437 XXXXXXXXXXXPTTFIAADPSNFRQMVQQVTGIRFGDAPNVQQFTTTVLKPAPQRLGNRI 616
                       TTFI+ADP+NFRQMVQQVTG+R     N Q     VLKP PQR G+R+
Sbjct: 116 SKRKSRASKRSQTTFISADPANFRQMVQQVTGVRL---DNSQFPVVPVLKPEPQRPGSRL 172

Query: 617 --PTYAMPTLDTSSAFLLDNNHXXXXXXXXXSQEQPVEGGGT------------------ 736
                 +PTLDT SAFLLD++H          Q+Q + GG T                  
Sbjct: 173 RGAPGGLPTLDT-SAFLLDHHH--------HQQQQQMVGGATSSSGPIVGRDPVSFSQAV 223

Query: 737 --------GLDFATFHNFPTLESWRVM 793
                   GL+F TF +FPTLES +VM
Sbjct: 224 LADGGPSAGLEFDTFSSFPTLESGKVM 250


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