BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000743
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18334.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002522935.1| conserved hypothetical protein [Ricinus comm...   196   4e-48
ref|XP_002451517.1| hypothetical protein SORBIDRAFT_04g003130 [S...   188   1e-45
emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]   186   4e-45
ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g...   177   2e-42

>emb|CBI18334.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  197 bits (502), Expect = 2e-48
 Identities = 125/298 (41%), Positives = 167/298 (56%), Gaps = 13/298 (4%)
 Frame = +3

Query: 3    DFQPXXXXXXXXXXXXYNGCVWKGGRLRLEKAKEHYLVRLRREWEEDVEVA--------- 155
            DF P            YNGC WKGGRL+LEKAKEHYLVRL REW ED E+A         
Sbjct: 227  DFLPSSAKSLSKLFSTYNGCFWKGGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSID 286

Query: 156  -QDNIDIAEK-PKLLTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFC 329
               NI  ++K  K + Q+K+QL+IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFC
Sbjct: 287  KNTNIVASDKLKKTVNQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFC 346

Query: 330  DCEEHCGASEIAKVKQISANEEQTEIMKEEELNMMRSVMDKIFNREVKPGLEGSKVKVPT 509
            DCEEH G   IA+ +     E Q+  M ++ELN+M SVM+KIF RE              
Sbjct: 347  DCEEHSGPPHIAQKQYFCDPESQSGGMNKDELNVMNSVMNKIFERET------------- 393

Query: 510  EEESPKHSVDDLPSESEADEDNDTDNIVINLVRG--GKTKLGSVEKGRLENVDQESGFGK 683
             +   +  VD     +E+D   D DN+VIN+  G      LGS E+  + +++Q+S F  
Sbjct: 394  -DLKDELRVDG----NESDLVEDEDNLVINMFTGRHRMALLGSQEQEAI-SMNQKSRFND 447

Query: 684  LQPSNVAPSHNKIKARKEVSGNPSDTITKKPRLLLSDESNINEFTSTMHKRKECPETN 857
               S   P+   + +            TKK + L  DES+ NEF S +  +K   +T+
Sbjct: 448  TWTSTDGPAPITLPS------------TKKRKSLHIDESDGNEFLSAIPGKKPSLQTH 493


>ref|XP_002522935.1| conserved hypothetical protein [Ricinus communis]
           gi|223537829|gb|EEF39446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 636

 Score =  196 bits (499), Expect = 4e-48
 Identities = 115/257 (44%), Positives = 150/257 (58%), Gaps = 14/257 (5%)
 Frame = +3

Query: 3   DFQPXXXXXXXXXXXXYNGCVWKGGRLRLEKAKEHYLVRLRREWEEDVEVAQDNI--DI- 173
           DF P            YNGCVWKGGRL+L+KAKEHYL RL+REW ED ++A      D+ 
Sbjct: 58  DFLPSSVSALPKLFNTYNGCVWKGGRLKLDKAKEHYLDRLKREWAEDAQLANSTCSDDVN 117

Query: 174 ------AEKP----KLLTQDKTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIH 323
                  E P    K L+ DK QL++FFPRL K+KS+P+SGTGKHKYSFRRVEVPSLP+H
Sbjct: 118 NDADKQMESPRKTKKDLSLDKKQLRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLH 177

Query: 324 FCDCEEHCGASEIAKVKQISANEEQTEIMKEEELNMMRSVMDKIFNREVKPGLEGSKVKV 503
           FCDCEEH G+    K KQI   EEQ   + +EEL++M SVM+++F  E   G   S  ++
Sbjct: 178 FCDCEEHSGSLHAPKGKQIPVLEEQGGGVNQEELDLMISVMNRLFEIENVSGAPHSDNEL 237

Query: 504 PTEEESPKHSVDDLP-SESEADEDNDTDNIVINLVRGGKTKLGSVEKGRLENVDQESGFG 680
             EE+   ++ D+    ESE     D D+++IN+V   K    S         +QES   
Sbjct: 238 TKEEDYNTNATDNPQLDESEGYSTADEDDLIINVVSRRKETAFS---------NQESKLN 288

Query: 681 KLQPSNVAPSHNKIKAR 731
           K Q S   P+   ++ R
Sbjct: 289 KRQASEDRPAQEVLRKR 305


>ref|XP_002451517.1| hypothetical protein SORBIDRAFT_04g003130 [Sorghum bicolor]
           gi|241931348|gb|EES04493.1| hypothetical protein
           SORBIDRAFT_04g003130 [Sorghum bicolor]
          Length = 569

 Score =  188 bits (478), Expect = 1e-45
 Identities = 121/299 (40%), Positives = 170/299 (56%), Gaps = 45/299 (15%)
 Frame = +3

Query: 51  YNGCVWKGGRLRLEKAKEHYLVRLRREWEEDVEVA-------QDNIDIAEKPKL--LTQD 203
           YNGC WKGG+LRLEKAKEHYL RL+REWEED   A       +DN +  +KPKL     +
Sbjct: 83  YNGCKWKGGKLRLEKAKEHYLTRLKREWEEDAAAAASKEAALKDNAE-NQKPKLEKAALE 141

Query: 204 KTQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQIS 383
             ++ I+FP+L K+K++P  GTGKHKYSFR +EVPS PIHFCDCEEHCG  E       +
Sbjct: 142 GMKINIYFPKLRKMKALPLKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGPPE-------A 194

Query: 384 ANEEQTEIMK----EEELNMMRSVMDKIFNRE------------------VKPGLEGSKV 497
           AN+E   ++     E+E N+M SVM+K+F +E                  ++P    S +
Sbjct: 195 ANDEYASVLNAAAYEKERNIMNSVMNKLFEKENEHLDSCEVGKFDGHTDTIEPSNAVSDM 254

Query: 498 KVPTEEESPKHSVDDLP---SESEADEDNDTDNIVINLV--RGGKTKLG-SVEKGRLENV 659
           ++    E PK  +D+LP   +E  +DED D D++VIN+   +  K+ +G ++EK   + V
Sbjct: 255 QIEETGEGPKEDLDNLPMEETEESSDEDLD-DDLVINIAPRKSNKSAVGANMEK---QEV 310

Query: 660 DQESGFGKLQPSNVAPSHNKIKARKEVSGNP--------SDTITKKPRLLLSDESNINE 812
           +++S   K +P    PS  K + + E S  P        SDT T    L L  E++ NE
Sbjct: 311 NKDSQLQK-RPRIEEPSLPKKRQKSEASSEPIKRNGEHVSDTRTTGKTLPLKSEASQNE 368


>emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
          Length = 654

 Score =  186 bits (473), Expect = 4e-45
 Identities = 123/292 (42%), Positives = 167/292 (57%), Gaps = 30/292 (10%)
 Frame = +3

Query: 72  GGRLRLEKAKEHYLVRLRREWEEDVEVA--------QDNIDIAEKPKL---LTQDKTQLK 218
           GGRL+LEKAKEHYLVRL REW ED E+A          N +I    KL   + Q+K+QL+
Sbjct: 80  GGRLKLEKAKEHYLVRLSREWAEDGELAISQPSNSIDKNTNIVSSDKLKKTVNQEKSQLR 139

Query: 219 IFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISANEEQ 398
           IFFP+L K+KS+P+SGTGKHKYSF+R+EVPSLP HFCDCEEH G   IA+ +     E Q
Sbjct: 140 IFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQKQYFCDPEPQ 199

Query: 399 TEIMKEEELNMMRSVMDKIFNRE----VKPGLEG-SKVKVPTEEESPKHSVDDLPSESEA 563
           +  M ++ELNMM SVM+KIF RE    V   + G +K    + + + +  +DD  S+  A
Sbjct: 200 SGGMNKDELNMMNSVMNKIFERETDLKVAYNVTGLTKGGHDSLKSTNERLIDDNESDHAA 259

Query: 564 DED------------NDTDNIVINLVRG--GKTKLGSVEKGRLENVDQESGFGKLQPSNV 701
           DED             D DN+VIN+  G      LGS E+  + +++Q+S F     S  
Sbjct: 260 DEDELRVDGNESDLAEDEDNLVINMFTGRHRMALLGSQEQEAI-SMNQKSRFNDTWTSTD 318

Query: 702 APSHNKIKARKEVSGNPSDTITKKPRLLLSDESNINEFTSTMHKRKECPETN 857
            P+   + +            TKK + L  DES+ NEF S +  +K   +T+
Sbjct: 319 GPAPITLPS------------TKKRKSLHIDESDGNEFLSAIPGKKPSLQTH 358


>ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
           gi|42409268|dbj|BAD10531.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza
           sativa Japonica Group] gi|125538008|gb|EAY84403.1|
           hypothetical protein OsI_05779 [Oryza sativa Indica
           Group] gi|125580747|gb|EAZ21678.1| hypothetical protein
           OsJ_05309 [Oryza sativa Japonica Group]
           gi|215694017|dbj|BAG89216.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 552

 Score =  177 bits (450), Expect = 2e-42
 Identities = 94/243 (38%), Positives = 140/243 (57%), Gaps = 30/243 (12%)
 Frame = +3

Query: 51  YNGCVWKGGRLRLEKAKEHYLVRLRREWEEDVEVAQD---NIDIAEKPKLL-----TQDK 206
           YNGC WKGG+LRLEKAKEHYL RL+REWE++   AQ+   + D+  K + L       D 
Sbjct: 75  YNGCKWKGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKEKLELNKAVLDS 134

Query: 207 TQLKIFFPRLHKIKSVPYSGTGKHKYSFRRVEVPSLPIHFCDCEEHCGASEIAKVKQISA 386
           T++ I+FP+L K+K++P+ GTGKHKYSFR +EVPS PIHFCDCEEHCG  E       +A
Sbjct: 135 TKINIYFPKLRKVKALPFKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGPPE-------AA 187

Query: 387 NEEQTEIMK----EEELNMMRSVMDKIFNRE------------------VKPGLEGSKVK 500
           N+E   ++     E+E ++M SVM K+F +E                   +P    ++++
Sbjct: 188 NDEYASVLDAAAYEKERSIMNSVMSKLFEKENDHLDSMEIQNHGVDFDAAEPSNARNELQ 247

Query: 501 VPTEEESPKHSVDDLPSESEADEDNDTDNIVINLVRGGKTKLGSVEKGRLENVDQESGFG 680
           +   EE+ +  +DD   E+E   + + D++V+N+V        +      +  D++S F 
Sbjct: 248 MDKREETSEEDLDDQMEETEDPSEEELDDLVLNIVTCKPKSSVAQLNSEKQAADKDSRFR 307

Query: 681 KLQ 689
           K Q
Sbjct: 308 KRQ 310