BLASTX nr result

ID: Coptis25_contig00000742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000742
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    92   6e-17
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...    91   8e-17
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...    91   8e-17
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    91   8e-17
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    91   1e-16

>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/105 (45%), Positives = 67/105 (63%)
 Frame = -2

Query: 316 GRDFDKKEILSMLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELKI 137
           GRD +KK ++S LL E+SQ+   V   ++S+VG GG GKTTLAQL +N+  +   FE KI
Sbjct: 83  GRDGEKKNVVSKLLAESSQKARDV--DVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKI 140

Query: 136 WVCVSEPFDLVRVAREIIAHATGEKLPENIVGWDLLHQHLCNSVK 2
           WVCVS+PFD V++A+ I+    G     N+V    L Q +  S+K
Sbjct: 141 WVCVSDPFDEVKIAKAILEQLEGS--APNLVELQSLLQRVSESIK 183


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/85 (56%), Positives = 58/85 (68%)
 Frame = -2

Query: 319 FGRDFDKKEILSMLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELK 140
           +GRD DK  IL  LL ET Q ET+    I+SIVGTGG GKTTLAQL YN   +   F+ +
Sbjct: 170 YGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTLAQLAYNHPEVKAHFDER 228

Query: 139 IWVCVSEPFDLVRVAREIIAHATGE 65
           IWVCVS+PFD +R+ REI+    GE
Sbjct: 229 IWVCVSDPFDPIRIFREIVEILQGE 253


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/85 (56%), Positives = 58/85 (68%)
 Frame = -2

Query: 319 FGRDFDKKEILSMLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELK 140
           +GRD DK  IL  LL ET Q ET+    I+SIVGTGG GKTTLAQL YN   +   F+ +
Sbjct: 171 YGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTLAQLAYNHPEVKAHFDER 229

Query: 139 IWVCVSEPFDLVRVAREIIAHATGE 65
           IWVCVS+PFD +R+ REI+    GE
Sbjct: 230 IWVCVSDPFDPIRIFREIVEILQGE 254


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/104 (45%), Positives = 66/104 (63%)
 Frame = -2

Query: 316 GRDFDKKEILSMLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELKI 137
           GRD +K+ ++S LL E+S +   V   ++S+VG GG GKTTLAQL +N+  +   FE KI
Sbjct: 174 GRDGEKRNVVSKLLAESSHEARDV--DVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKI 231

Query: 136 WVCVSEPFDLVRVAREIIAHATGEKLPENIVGWDLLHQHLCNSV 5
           WVCVSEPFD +R+A+ I+    G   P N+V    L Q +  S+
Sbjct: 232 WVCVSEPFDEIRIAKAILEQLEGR--PTNLVELQSLLQGVSESI 273


>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/105 (45%), Positives = 67/105 (63%)
 Frame = -2

Query: 316 GRDFDKKEILSMLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEGTIATTFELKI 137
           GRD +K  ++S L+ E+SQ+   V   ++S+VG GG GKTTLAQL +N+  + T FE KI
Sbjct: 174 GRDVEKTTVISKLVGESSQEARDV--DVISLVGLGGIGKTTLAQLAFNDAEVTTHFEKKI 231

Query: 136 WVCVSEPFDLVRVAREIIAHATGEKLPENIVGWDLLHQHLCNSVK 2
           WVCVSEPFD VR+A+ I+    G     ++V    L Q +  S+K
Sbjct: 232 WVCVSEPFDQVRIAKAILEQLEGR--APDLVELQSLLQRVSESIK 274


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