BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000732
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   319   1e-84
ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   317   4e-84
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   315   2e-83
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   314   3e-83
ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   313   6e-83

>ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
          Length = 336

 Score =  319 bits (817), Expect = 1e-84
 Identities = 158/292 (54%), Positives = 201/292 (68%), Gaps = 15/292 (5%)
 Frame = +3

Query: 129 DSDDY------QTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYA 290
           DSDD+      + N  YS P++++DV+WNLAFVLVS+++LFSTF+ERPSTPLRLWI+GY 
Sbjct: 55  DSDDFSRRSFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYG 114

Query: 291 FQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXXRRGSAAKRLESVNTMFSFFWWMMGFYW 470
            QC+LHV FV+F+++R +                  S  KRLES+NTM S  WW+ GFYW
Sbjct: 115 LQCLLHVGFVFFEYQRSMAHHGFEDRTAHR------SIMKRLESMNTMTSSVWWVFGFYW 168

Query: 471 IVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAIGV 650
           IV+GGQALLQD+PRLYWL V+FLAFD+FF + C+  AC+I  +LCCC P +  A YA+  
Sbjct: 169 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFA-YAMTT 227

Query: 651 RDGASEDVIRILPSYRFRQC--------NEPQVSGSAMMKMESGDDH-ISEISLPAEDSE 803
           R+GASE+ IR LP Y FRQ          E +  GS    +E  + H I E++L  EDSE
Sbjct: 228 REGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGST---VELDNSHRIKELALHPEDSE 284

Query: 804 CCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGDELV 959
           CCICL++Y DG +L++L C H FHC CI KWLRI+ATCPLCK NI  GD LV
Sbjct: 285 CCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336


>ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
           max]
          Length = 334

 Score =  317 bits (812), Expect = 4e-84
 Identities = 150/308 (48%), Positives = 202/308 (65%), Gaps = 10/308 (3%)
 Frame = +3

Query: 66  VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQ 245
           +L   L +R   + +      + ++ + +W YSKPVV +D+ WN+AFVLVS ++L  T +
Sbjct: 27  ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86

Query: 246 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXXRRGSA------A 407
           E P+TP+R WI GYA QC++HVA V+ ++RRR                    +       
Sbjct: 87  ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDARFT 146

Query: 408 KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACL 587
           KR  S+NTM S  WWM+GFYW+V GG  LLQDAPRLYWL+V+FLAFDVFFAI CV  ACL
Sbjct: 147 KRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACL 206

Query: 588 IGIALCCCFPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNE---PQVSGSAMMKMESG 758
           IGIALCCC PC++  LYA+  ++GASE  + ILP YRF+  +    P   G +M+ ME+ 
Sbjct: 207 IGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETS 266

Query: 759 DDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYN 935
           + + ++E +L  ED+ECCIC++ Y DG +LH L C H FH  CIVKWL+++ATCPLCKYN
Sbjct: 267 NGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYN 326

Query: 936 IASGDELV 959
           I  G+E V
Sbjct: 327 ILKGNEQV 334


>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
           max]
          Length = 344

 Score =  315 bits (806), Expect = 2e-83
 Identities = 152/318 (47%), Positives = 205/318 (64%), Gaps = 20/318 (6%)
 Frame = +3

Query: 66  VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQ 245
           +L   L +R   + +      + ++ + +W YSKPVV +D+ WN+AFVLVS ++L  T +
Sbjct: 27  ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86

Query: 246 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRR-----------IXXXXXXXXXXXXXXXR 392
           E P+TP+R WI GYA QC++HVA V+ ++RRR                            
Sbjct: 87  ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDDVGT 146

Query: 393 RGSAA-----KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFF 557
            GS++     KR  S+NTM S  WWM+GFYW+V GG  LLQDAPRLYWL+V+FLAFDVFF
Sbjct: 147 SGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFF 206

Query: 558 AILCVAFACLIGIALCCCFPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNE---PQVS 728
           AI CV  ACLIGIALCCC PC++  LYA+  ++GASE  + ILP YRF+  +    P   
Sbjct: 207 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEG 266

Query: 729 GSAMMKMESGDDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRI 905
           G +M+ ME+ + + ++E +L  ED+ECCIC++ Y DG +LH L C H FH  CIVKWL++
Sbjct: 267 GGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKM 326

Query: 906 SATCPLCKYNIASGDELV 959
           +ATCPLCKYNI  G+E V
Sbjct: 327 NATCPLCKYNILKGNEQV 344


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  314 bits (804), Expect = 3e-83
 Identities = 148/299 (49%), Positives = 196/299 (65%), Gaps = 24/299 (8%)
 Frame = +3

Query: 135  DDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYAFQCVLHVA 314
            ++ + +W YSKPVV +D++WN++FV+VS+++L  T +ERP+TP+RLWI GYA QC +HV 
Sbjct: 2001 EERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVV 2060

Query: 315  FVYFDHRRRIXXXXXXXXXXXXXXX---------------------RRGSAAKRLESVNT 431
             V+ ++RRR                                      + S  KR ESVNT
Sbjct: 2061 LVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNT 2120

Query: 432  MFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCC 611
            M SF WW++GFYW+V GG+ALLQ+APRLYWLAV+FLAFDVFFAI CV  ACLIGIALCCC
Sbjct: 2121 MASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 2180

Query: 612  FPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNEPQ--VSGSAMMKMESGDDHI-SEIS 782
             PC++  LYA+  ++GASE  + +LP YRF   NE +  V    M+  E+   ++ +E  
Sbjct: 2181 LPCIIAILYAVAGQEGASEADLSMLPRYRFEANNEEKSGVGAGTMIPTETSSGYLANERI 2240

Query: 783  LPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGDELV 959
            L  ED+ECCICL+ Y DG +LH+L C H FH  CI KWL+++ATCPLCKYNI  G E +
Sbjct: 2241 LLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299


>ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Brachypodium distachyon]
          Length = 354

 Score =  313 bits (802), Expect = 6e-83
 Identities = 148/288 (51%), Positives = 194/288 (67%), Gaps = 13/288 (4%)
 Frame = +3

Query: 135 DDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYAFQCVLHVA 314
           ++ Q +W YS+PVV +D+LWNLAF+LV+ ++L  +  E PS PLR+WIAGYA QCVLH+ 
Sbjct: 67  EERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMV 126

Query: 315 FVYFDHRRRIXXXXXXXXXXXXXXXRRGSA--AKRLESVNTMFSFFWWMMGFYWIVVGGQ 488
            V  ++R R                  GS+  AK LES NTMFSF WW++GFYW+  GG+
Sbjct: 127 CVAIEYRVRHGQRGGPSMAADEERGSDGSSSIAKHLESGNTMFSFIWWIIGFYWVSAGGE 186

Query: 489 ALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAIGVRDGASE 668
            L++DAP+LYWL ++FLAFDVFF + CVA AC+IGIA+CCC PC++  LYA+  ++GASE
Sbjct: 187 VLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASE 246

Query: 669 DVIRILPSYRFRQCNEPQVSGSAM------MKMESGDDHISEISLPAEDSECCICLTKYV 830
           D IR +P Y+FR+ NEP+    +M      M +E G +   E  L AED+ECCICL+ Y 
Sbjct: 247 DDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYD 306

Query: 831 DGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNI-----ASGDELV 959
           DG +L  L C H FHC CI KWL I+ATCPLCK N+     +SG E V
Sbjct: 307 DGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVRKNSSSSGSEEV 354