BLASTX nr result
ID: Coptis25_contig00000732
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000732 (1208 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 319 1e-84 ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 317 4e-84 ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 315 2e-83 ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 314 3e-83 ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 313 6e-83 >ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus] Length = 336 Score = 319 bits (817), Expect = 1e-84 Identities = 158/292 (54%), Positives = 201/292 (68%), Gaps = 15/292 (5%) Frame = +3 Query: 129 DSDDY------QTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYA 290 DSDD+ + N YS P++++DV+WNLAFVLVS+++LFSTF+ERPSTPLRLWI+GY Sbjct: 55 DSDDFSRRSFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYG 114 Query: 291 FQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXXRRGSAAKRLESVNTMFSFFWWMMGFYW 470 QC+LHV FV+F+++R + S KRLES+NTM S WW+ GFYW Sbjct: 115 LQCLLHVGFVFFEYQRSMAHHGFEDRTAHR------SIMKRLESMNTMTSSVWWVFGFYW 168 Query: 471 IVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAIGV 650 IV+GGQALLQD+PRLYWL V+FLAFD+FF + C+ AC+I +LCCC P + A YA+ Sbjct: 169 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFA-YAMTT 227 Query: 651 RDGASEDVIRILPSYRFRQC--------NEPQVSGSAMMKMESGDDH-ISEISLPAEDSE 803 R+GASE+ IR LP Y FRQ E + GS +E + H I E++L EDSE Sbjct: 228 REGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGST---VELDNSHRIKELALHPEDSE 284 Query: 804 CCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGDELV 959 CCICL++Y DG +L++L C H FHC CI KWLRI+ATCPLCK NI GD LV Sbjct: 285 CCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336 >ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine max] Length = 334 Score = 317 bits (812), Expect = 4e-84 Identities = 150/308 (48%), Positives = 202/308 (65%), Gaps = 10/308 (3%) Frame = +3 Query: 66 VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQ 245 +L L +R + + + ++ + +W YSKPVV +D+ WN+AFVLVS ++L T + Sbjct: 27 ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86 Query: 246 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXXRRGSA------A 407 E P+TP+R WI GYA QC++HVA V+ ++RRR + Sbjct: 87 ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDARFT 146 Query: 408 KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACL 587 KR S+NTM S WWM+GFYW+V GG LLQDAPRLYWL+V+FLAFDVFFAI CV ACL Sbjct: 147 KRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACL 206 Query: 588 IGIALCCCFPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNE---PQVSGSAMMKMESG 758 IGIALCCC PC++ LYA+ ++GASE + ILP YRF+ + P G +M+ ME+ Sbjct: 207 IGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETS 266 Query: 759 DDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYN 935 + + ++E +L ED+ECCIC++ Y DG +LH L C H FH CIVKWL+++ATCPLCKYN Sbjct: 267 NGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYN 326 Query: 936 IASGDELV 959 I G+E V Sbjct: 327 ILKGNEQV 334 >ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine max] Length = 344 Score = 315 bits (806), Expect = 2e-83 Identities = 152/318 (47%), Positives = 205/318 (64%), Gaps = 20/318 (6%) Frame = +3 Query: 66 VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQ 245 +L L +R + + + ++ + +W YSKPVV +D+ WN+AFVLVS ++L T + Sbjct: 27 ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86 Query: 246 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRR-----------IXXXXXXXXXXXXXXXR 392 E P+TP+R WI GYA QC++HVA V+ ++RRR Sbjct: 87 ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDDVGT 146 Query: 393 RGSAA-----KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFF 557 GS++ KR S+NTM S WWM+GFYW+V GG LLQDAPRLYWL+V+FLAFDVFF Sbjct: 147 SGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFF 206 Query: 558 AILCVAFACLIGIALCCCFPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNE---PQVS 728 AI CV ACLIGIALCCC PC++ LYA+ ++GASE + ILP YRF+ + P Sbjct: 207 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEG 266 Query: 729 GSAMMKMESGDDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRI 905 G +M+ ME+ + + ++E +L ED+ECCIC++ Y DG +LH L C H FH CIVKWL++ Sbjct: 267 GGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKM 326 Query: 906 SATCPLCKYNIASGDELV 959 +ATCPLCKYNI G+E V Sbjct: 327 NATCPLCKYNILKGNEQV 344 >ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera] Length = 2299 Score = 314 bits (804), Expect = 3e-83 Identities = 148/299 (49%), Positives = 196/299 (65%), Gaps = 24/299 (8%) Frame = +3 Query: 135 DDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYAFQCVLHVA 314 ++ + +W YSKPVV +D++WN++FV+VS+++L T +ERP+TP+RLWI GYA QC +HV Sbjct: 2001 EERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVV 2060 Query: 315 FVYFDHRRRIXXXXXXXXXXXXXXX---------------------RRGSAAKRLESVNT 431 V+ ++RRR + S KR ESVNT Sbjct: 2061 LVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNT 2120 Query: 432 MFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCC 611 M SF WW++GFYW+V GG+ALLQ+APRLYWLAV+FLAFDVFFAI CV ACLIGIALCCC Sbjct: 2121 MASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 2180 Query: 612 FPCLVLALYAIGVRDGASEDVIRILPSYRFRQCNEPQ--VSGSAMMKMESGDDHI-SEIS 782 PC++ LYA+ ++GASE + +LP YRF NE + V M+ E+ ++ +E Sbjct: 2181 LPCIIAILYAVAGQEGASEADLSMLPRYRFEANNEEKSGVGAGTMIPTETSSGYLANERI 2240 Query: 783 LPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGDELV 959 L ED+ECCICL+ Y DG +LH+L C H FH CI KWL+++ATCPLCKYNI G E + Sbjct: 2241 LLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299 >ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2 [Brachypodium distachyon] Length = 354 Score = 313 bits (802), Expect = 6e-83 Identities = 148/288 (51%), Positives = 194/288 (67%), Gaps = 13/288 (4%) Frame = +3 Query: 135 DDYQTNWPYSKPVVIVDVLWNLAFVLVSLILLFSTFQERPSTPLRLWIAGYAFQCVLHVA 314 ++ Q +W YS+PVV +D+LWNLAF+LV+ ++L + E PS PLR+WIAGYA QCVLH+ Sbjct: 67 EERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMV 126 Query: 315 FVYFDHRRRIXXXXXXXXXXXXXXXRRGSA--AKRLESVNTMFSFFWWMMGFYWIVVGGQ 488 V ++R R GS+ AK LES NTMFSF WW++GFYW+ GG+ Sbjct: 127 CVAIEYRVRHGQRGGPSMAADEERGSDGSSSIAKHLESGNTMFSFIWWIIGFYWVSAGGE 186 Query: 489 ALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAIGVRDGASE 668 L++DAP+LYWL ++FLAFDVFF + CVA AC+IGIA+CCC PC++ LYA+ ++GASE Sbjct: 187 VLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASE 246 Query: 669 DVIRILPSYRFRQCNEPQVSGSAM------MKMESGDDHISEISLPAEDSECCICLTKYV 830 D IR +P Y+FR+ NEP+ +M M +E G + E L AED+ECCICL+ Y Sbjct: 247 DDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYD 306 Query: 831 DGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNI-----ASGDELV 959 DG +L L C H FHC CI KWL I+ATCPLCK N+ +SG E V Sbjct: 307 DGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVRKNSSSSGSEEV 354