BLASTX nr result
ID: Coptis25_contig00000728
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000728 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera] 59 3e-07 ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich... 58 9e-07 ref|XP_002268547.2| PREDICTED: putative disease resistance prote... 57 2e-06 ref|XP_002268589.2| PREDICTED: putative disease resistance prote... 57 2e-06 emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera] 57 2e-06 >emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera] Length = 1361 Score = 59.3 bits (142), Expect = 3e-07 Identities = 28/62 (45%), Positives = 45/62 (72%) Frame = -1 Query: 186 SSAVDVSKLTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKT 7 +S D +LTSS+VD +E++GRD DK++I+ +LL + + +T ++ ++ IVG GG GKT Sbjct: 163 ASVTDQQRLTSSLVDEAEVYGRDGDKEKIIELLL--SDELDTADKVQVIPIVGMGGVGKT 220 Query: 6 TL 1 TL Sbjct: 221 TL 222 >ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa] gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance protein [Populus trichocarpa] Length = 987 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/53 (50%), Positives = 41/53 (77%) Frame = -1 Query: 159 TSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1 T+S VDVS + GR+ +K+ ++S LLC++SQ+ +V+ ++SIVG GG GKTTL Sbjct: 189 TTSFVDVSRVHGREDEKKNVISKLLCDSSQEGRKVQ--VISIVGMGGLGKTTL 239 >ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis vinifera] Length = 880 Score = 57.0 bits (136), Expect = 2e-06 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = -1 Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1 +T+S +D+ E++GRD DK IL LL ET Q ET+ I+SIVGTGG GKTTL Sbjct: 159 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 211 >ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis vinifera] Length = 922 Score = 57.0 bits (136), Expect = 2e-06 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = -1 Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1 +T+S +D+ E++GRD DK IL LL ET Q ET+ I+SIVGTGG GKTTL Sbjct: 160 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 212 >emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera] Length = 1295 Score = 57.0 bits (136), Expect = 2e-06 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = -1 Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1 +T+S +D+ E++GRD DK IL LL ET Q ET+ I+SIVGTGG GKTTL Sbjct: 202 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 254