BLASTX nr result

ID: Coptis25_contig00000728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000728
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera]    59   3e-07
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...    58   9e-07
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...    57   2e-06
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...    57   2e-06
emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]    57   2e-06

>emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera]
          Length = 1361

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/62 (45%), Positives = 45/62 (72%)
 Frame = -1

Query: 186 SSAVDVSKLTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKT 7
           +S  D  +LTSS+VD +E++GRD DK++I+ +LL  + + +T  ++ ++ IVG GG GKT
Sbjct: 163 ASVTDQQRLTSSLVDEAEVYGRDGDKEKIIELLL--SDELDTADKVQVIPIVGMGGVGKT 220

Query: 6   TL 1
           TL
Sbjct: 221 TL 222


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = -1

Query: 159 TSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1
           T+S VDVS + GR+ +K+ ++S LLC++SQ+  +V+  ++SIVG GG GKTTL
Sbjct: 189 TTSFVDVSRVHGREDEKKNVISKLLCDSSQEGRKVQ--VISIVGMGGLGKTTL 239


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1
           +T+S +D+ E++GRD DK  IL  LL ET Q ET+    I+SIVGTGG GKTTL
Sbjct: 159 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 211


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1
           +T+S +D+ E++GRD DK  IL  LL ET Q ET+    I+SIVGTGG GKTTL
Sbjct: 160 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 212


>emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]
          Length = 1295

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 162 LTSSVVDVSEIFGRDHDKQEILSMLLCETSQQETRVRIPILSIVGTGGFGKTTL 1
           +T+S +D+ E++GRD DK  IL  LL ET Q ET+    I+SIVGTGG GKTTL
Sbjct: 202 ITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVGTGGMGKTTL 254


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