BLASTX nr result

ID: Coptis25_contig00000727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000727
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515731.1| conserved hypothetical protein [Ricinus comm...   132   3e-29
ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 ...   132   3e-29
ref|XP_004151875.1| PREDICTED: peroxisome biogenesis protein 22-...   130   1e-28
gb|ABK92497.1| unknown [Populus trichocarpa]                          129   2e-28
ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-...   124   8e-27

>ref|XP_002515731.1| conserved hypothetical protein [Ricinus communis]
           gi|223545168|gb|EEF46678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/144 (52%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
 Frame = +3

Query: 57  SNEDAIQLIKRFGAYITLKITNLFSIT--SLNSRSVGTVAGLALAMVLTWRLLRSPXXXX 230
           S E+ +QLIKRFGAYIT+K++N+FSI+  +L+SRSVG +AGLA+A+V TWR+LRSP    
Sbjct: 11  SKEELVQLIKRFGAYITVKMSNIFSISFYNLDSRSVGAIAGLAVAIVFTWRMLRSP---- 66

Query: 231 XXXXXXXXXXXXXEVPKRQ--XXXXXXXXXXXXXXXXXXXXATGNDDLRAQNVIDEFFQP 404
                          PKRQ                       + ++DLRAQNV+D FFQP
Sbjct: 67  --------GGPQRRQPKRQAPTSSTSVVTPQSNSTLMPSGVCSSSEDLRAQNVVDNFFQP 118

Query: 405 VKPTLGQVVRQKLCEGRKVTCRLL 476
           VKPTLGQ+VRQKL EGRKVTCRLL
Sbjct: 119 VKPTLGQIVRQKLSEGRKVTCRLL 142


>ref|XP_002280526.1| PREDICTED: peroxisome biogenesis protein 22 [Vitis vinifera]
           gi|297739312|emb|CBI28963.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  132 bits (332), Expect = 3e-29
 Identities = 76/149 (51%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
 Frame = +3

Query: 42  MAPNQSNEDAIQLIKRFGAYITLKITNLFSIT--SLNSRSVGTVAGLALAMVLTWRLLRS 215
           MA   S E+ ++LIK+FGAY+T+K++NLFSI+  +L+SRSVG +AG A+AM+ TWRLLRS
Sbjct: 1   MAAESSKEELVRLIKKFGAYLTVKMSNLFSISLRNLDSRSVGALAGFAVAMIFTWRLLRS 60

Query: 216 PXXXXXXXXXXXXXXXXXEVPKRQ--XXXXXXXXXXXXXXXXXXXXATGNDDLRAQNVID 389
           P                   PKRQ                       + ++D RAQNVID
Sbjct: 61  P------------SGPQRRQPKRQAPAPSSSGVSSQSTTTLAPSGVCSSSEDSRAQNVID 108

Query: 390 EFFQPVKPTLGQVVRQKLCEGRKVTCRLL 476
           EFFQPVKPTLGQ+VRQKL EGRKVTCRLL
Sbjct: 109 EFFQPVKPTLGQIVRQKLSEGRKVTCRLL 137


>ref|XP_004151875.1| PREDICTED: peroxisome biogenesis protein 22-like [Cucumis sativus]
           gi|449484063|ref|XP_004156773.1| PREDICTED: peroxisome
           biogenesis protein 22-like [Cucumis sativus]
          Length = 276

 Score =  130 bits (327), Expect = 1e-28
 Identities = 75/151 (49%), Positives = 93/151 (61%), Gaps = 6/151 (3%)
 Frame = +3

Query: 42  MAPNQSNEDAIQLIKRFGAYITLKITNLF--SITSLNSRSVGTVAGLALAMVLTWRLLRS 215
           MA   S +D +QLIKRFGAY+TLK++N F  S+ +L+SRSVG +AG A+A++ TWRLLRS
Sbjct: 1   MADASSKDDLLQLIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLLRS 60

Query: 216 PXXXXXXXXXXXXXXXXXEVPKRQXXXXXXXXXXXXXXXXXXXXATG----NDDLRAQNV 383
                             + PKRQ                     +G    ++DLRA NV
Sbjct: 61  SNGHQR------------QQPKRQMPAPSSSASNAGLNTNEQSIPSGVCSPSEDLRAHNV 108

Query: 384 IDEFFQPVKPTLGQVVRQKLCEGRKVTCRLL 476
           +DEFFQPVKPTLGQ+VRQKL EGRKVTCRLL
Sbjct: 109 VDEFFQPVKPTLGQIVRQKLSEGRKVTCRLL 139


>gb|ABK92497.1| unknown [Populus trichocarpa]
          Length = 275

 Score =  129 bits (325), Expect = 2e-28
 Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
 Frame = +3

Query: 42  MAPNQSNEDAIQLIKRFGAYITLKITNLFSITSLNSRSVGTVAGLALAMVLTWRLLRSPX 221
           MA   S ++ +QLIKRF AY+T+KI+NLFS  +L+SRSVG VAGLA+A+V TWRLLRS  
Sbjct: 1   MATETSKDELLQLIKRFSAYLTVKISNLFSFNTLDSRSVGAVAGLAVAIVFTWRLLRS-- 58

Query: 222 XXXXXXXXXXXXXXXXEVPKRQ---XXXXXXXXXXXXXXXXXXXXATGNDDLRAQNVIDE 392
                             PKRQ                        + ++DLR QNV+DE
Sbjct: 59  ----------NSGPRRRQPKRQASTTSSSVVTTQPNAVSIPSGGVCSSSEDLRVQNVVDE 108

Query: 393 FFQPVKPTLGQVVRQKLCEGRKVTCRL 473
           FFQPVKPTL Q+VRQKL EGRKVTCRL
Sbjct: 109 FFQPVKPTLAQIVRQKLSEGRKVTCRL 135


>ref|XP_003543380.1| PREDICTED: peroxisome biogenesis protein 22-like [Glycine max]
          Length = 280

 Score =  124 bits (311), Expect = 8e-27
 Identities = 74/146 (50%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
 Frame = +3

Query: 57  SNEDAIQLIKRFGAYITLKITNLF--SITSLNSRSVGTVAGLALAMVLTWRLLRSPXXXX 230
           S ++  QLIKRFGAY+T KI+NLF  S+ +L+ RS+G VAGLA+A+V TWRLLRSP    
Sbjct: 10  SKQELFQLIKRFGAYVTFKISNLFPLSLHNLDLRSIGAVAGLAVAIVFTWRLLRSPSGSQ 69

Query: 231 XXXXXXXXXXXXXEVPKRQXXXXXXXXXXXXXXXXXXXXATG----NDDLRAQNVIDEFF 398
                           KRQ                     +     +DD RAQNV+DEFF
Sbjct: 70  RRQQ------------KRQGPSSSNPGVGTNSNSNASVVPSDACSPSDDSRAQNVVDEFF 117

Query: 399 QPVKPTLGQVVRQKLCEGRKVTCRLL 476
           QPVKPTLGQ+VRQKL EGRKVTCRLL
Sbjct: 118 QPVKPTLGQIVRQKLSEGRKVTCRLL 143


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