BLASTX nr result

ID: Coptis25_contig00000725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000725
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v...   315   1e-83
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] ...   308   2e-81
gb|AAM61603.1| unknown [Arabidopsis thaliana]                         307   3e-81
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...   300   4e-79

>ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera]
            gi|297738884|emb|CBI28129.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  315 bits (807), Expect = 1e-83
 Identities = 160/245 (65%), Positives = 185/245 (75%)
 Frame = -2

Query: 1076 HIAAGYRHGALLLVFFFTSSKLTKIGEDKKRSIDADFKQGGQRNWIQVLANSGISMLLVV 897
            H   GYR+GA+LL FF TSSKLTK GE+KKR +DADFK+GGQRNW QVL NSGIS +L +
Sbjct: 43   HFGVGYRYGAMLLAFFLTSSKLTKFGEEKKRLVDADFKEGGQRNWKQVLFNSGISAVLAL 102

Query: 896  VLGILTGWKDKCLDSKDSGVVTCLIAGIIGHYACCNGDTWSSEIGMLSNSQPRLITTFKP 717
            +L  LTGW+DKCLDSK+S ++T LI GIIGHY+CCNGDTWSSE+G+LS+SQPRLITTFKP
Sbjct: 103  ILWRLTGWQDKCLDSKESSLITSLIGGIIGHYSCCNGDTWSSELGILSDSQPRLITTFKP 162

Query: 716  VRRXXXXXXXXXXXXXXXXXXXXXXXTFVLAGLFTTKCSSDEAVKQLLVIPLAAMAGLCG 537
            VR+                       TFVL G FTTKC+SD A+KQLLVIPL+A+AGLCG
Sbjct: 163  VRKGTNGGVTKTGLLAATAAGGVIGLTFVLIGFFTTKCASDVALKQLLVIPLSAVAGLCG 222

Query: 536  SLIDSLLGATMQFSGFCSVRNXXXXXXXXXXXKISGLSILDNNAVNLVSIXXXXXXTSVA 357
            SLIDSLLGAT+Q+SGFCSVRN           KISG+SILDNN VNLVSI      TS+A
Sbjct: 223  SLIDSLLGATLQYSGFCSVRNKVVGKPGPTVRKISGISILDNNGVNLVSILLTSMLTSIA 282

Query: 356  CLYIF 342
            CLYIF
Sbjct: 283  CLYIF 287


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  311 bits (796), Expect = 2e-82
 Identities = 159/245 (64%), Positives = 181/245 (73%)
 Frame = -2

Query: 1076 HIAAGYRHGALLLVFFFTSSKLTKIGEDKKRSIDADFKQGGQRNWIQVLANSGISMLLVV 897
            H A  YR GA+LLVFFF+SSKLTK+GEDKKR  DA+FK+GGQRNWIQVLANSGI+ +LV+
Sbjct: 43   HFAISYRFGAILLVFFFSSSKLTKVGEDKKRRFDAEFKEGGQRNWIQVLANSGIASVLVL 102

Query: 896  VLGILTGWKDKCLDSKDSGVVTCLIAGIIGHYACCNGDTWSSEIGMLSNSQPRLITTFKP 717
             +G L GW+DKCLD K+S V+T LI GIIG Y+CCNGDTWSSE+G+LS++QPRLITTFKP
Sbjct: 103  AVGRLAGWEDKCLDGKESAVITSLIGGIIGQYSCCNGDTWSSELGVLSDAQPRLITTFKP 162

Query: 716  VRRXXXXXXXXXXXXXXXXXXXXXXXTFVLAGLFTTKCSSDEAVKQLLVIPLAAMAGLCG 537
            VRR                        FVL G FTTKC  D A+KQLLVIP+AA+AGLCG
Sbjct: 163  VRRGANGGVTLAGLLAAAAAGGVIGLAFVLIGFFTTKCVFDVALKQLLVIPVAALAGLCG 222

Query: 536  SLIDSLLGATMQFSGFCSVRNXXXXXXXXXXXKISGLSILDNNAVNLVSIXXXXXXTSVA 357
            SLIDSLLGAT+QFSGFC+VRN           KISGL ILDNNAVNLVSI      TSV 
Sbjct: 223  SLIDSLLGATLQFSGFCTVRNKVVGKPGPTVRKISGLDILDNNAVNLVSILLTALLTSVG 282

Query: 356  CLYIF 342
            C YIF
Sbjct: 283  CAYIF 287


>ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana]
            gi|334187781|ref|NP_001190343.1| uncharacterized protein
            [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332005384|gb|AED92767.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332005385|gb|AED92768.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 288

 Score =  308 bits (789), Expect = 2e-81
 Identities = 155/245 (63%), Positives = 183/245 (74%)
 Frame = -2

Query: 1076 HIAAGYRHGALLLVFFFTSSKLTKIGEDKKRSIDADFKQGGQRNWIQVLANSGISMLLVV 897
            H  AG+R+GALLLVFF TSSKLTK+GEDKKR +D +FK+GGQRNW+QVL NSGI+ +LVV
Sbjct: 44   HFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVV 103

Query: 896  VLGILTGWKDKCLDSKDSGVVTCLIAGIIGHYACCNGDTWSSEIGMLSNSQPRLITTFKP 717
            +   LTGWKDKCLDSK S +VT LI GIIGHYACCNGDTWSSE+G+LS++QPRLITTFKP
Sbjct: 104  IACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKP 163

Query: 716  VRRXXXXXXXXXXXXXXXXXXXXXXXTFVLAGLFTTKCSSDEAVKQLLVIPLAAMAGLCG 537
            V++                       TF++ GLFT  C+SD A+KQLLVIPL+A+AGLCG
Sbjct: 164  VKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCG 223

Query: 536  SLIDSLLGATMQFSGFCSVRNXXXXXXXXXXXKISGLSILDNNAVNLVSIXXXXXXTSVA 357
            SLIDS+LGAT+QFSGFCSVRN           KISG+ ILDNN VN VSI      TS+A
Sbjct: 224  SLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIA 283

Query: 356  CLYIF 342
             +YIF
Sbjct: 284  SVYIF 288


>gb|AAM61603.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score =  307 bits (786), Expect = 3e-81
 Identities = 155/245 (63%), Positives = 182/245 (74%)
 Frame = -2

Query: 1076 HIAAGYRHGALLLVFFFTSSKLTKIGEDKKRSIDADFKQGGQRNWIQVLANSGISMLLVV 897
            H  AG+R+GALLLVFF TSSKLTK+GEDKKR +D +FK+GGQRNW+QVL NSGI+ +LVV
Sbjct: 44   HFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVV 103

Query: 896  VLGILTGWKDKCLDSKDSGVVTCLIAGIIGHYACCNGDTWSSEIGMLSNSQPRLITTFKP 717
            +   LTGWKDKCLDSK S +VT LI GIIGHYACCNGDTWSSE+G+LS++QPRLITTFKP
Sbjct: 104  IACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKP 163

Query: 716  VRRXXXXXXXXXXXXXXXXXXXXXXXTFVLAGLFTTKCSSDEAVKQLLVIPLAAMAGLCG 537
            V++                       TF++ GLFT  C+SD A+KQLLVIPL A+AGLCG
Sbjct: 164  VKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLFALAGLCG 223

Query: 536  SLIDSLLGATMQFSGFCSVRNXXXXXXXXXXXKISGLSILDNNAVNLVSIXXXXXXTSVA 357
            SLIDS+LGAT+QFSGFCSVRN           KISG+ ILDNN VN VSI      TS+A
Sbjct: 224  SLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVDILDNNGVNFVSILLTSFLTSIA 283

Query: 356  CLYIF 342
             +YIF
Sbjct: 284  SVYIF 288


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
            gi|449508273|ref|XP_004163269.1| PREDICTED: transmembrane
            protein 19-like [Cucumis sativus]
          Length = 287

 Score =  300 bits (768), Expect = 4e-79
 Identities = 152/245 (62%), Positives = 181/245 (73%)
 Frame = -2

Query: 1076 HIAAGYRHGALLLVFFFTSSKLTKIGEDKKRSIDADFKQGGQRNWIQVLANSGISMLLVV 897
            H A  YR+GA+LLVFFFTSSKLTK+GE+KKR +DADFK+GGQRNWIQV+ NSGI+ +L V
Sbjct: 43   HFAINYRYGAVLLVFFFTSSKLTKVGEEKKRVVDADFKEGGQRNWIQVVFNSGIATVLAV 102

Query: 896  VLGILTGWKDKCLDSKDSGVVTCLIAGIIGHYACCNGDTWSSEIGMLSNSQPRLITTFKP 717
            ++  +TG +DKCLDSKDS +VT LI GI+GHY+CCNGDTWSSE+G+LS++ PRLIT FKP
Sbjct: 103  IIWKITGGQDKCLDSKDSALVTALIGGILGHYSCCNGDTWSSELGILSDATPRLITNFKP 162

Query: 716  VRRXXXXXXXXXXXXXXXXXXXXXXXTFVLAGLFTTKCSSDEAVKQLLVIPLAAMAGLCG 537
            VR+                       TFVL G FTTKC     +KQLLVIPLAA+AGLCG
Sbjct: 163  VRKGTNGAVTNAGLLAATAAGAVIGLTFVLLGFFTTKCDYGTTLKQLLVIPLAAVAGLCG 222

Query: 536  SLIDSLLGATMQFSGFCSVRNXXXXXXXXXXXKISGLSILDNNAVNLVSIXXXXXXTSVA 357
            S+IDSLLGAT+QFSGFC+VRN           KISGL+ILDNN VNLVS+      TS A
Sbjct: 223  SVIDSLLGATVQFSGFCTVRNKVVGKPGPTVKKISGLNILDNNGVNLVSVLLTTMLTSTA 282

Query: 356  CLYIF 342
            C+YIF
Sbjct: 283  CIYIF 287


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