BLASTX nr result
ID: Coptis25_contig00000719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000719
(2320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V... 389 e-105
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera] 374 e-101
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm... 347 1e-92
ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|2... 322 2e-85
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C... 298 6e-78
>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 389 bits (999), Expect = e-105
Identities = 256/601 (42%), Positives = 314/601 (52%), Gaps = 31/601 (5%)
Frame = +2
Query: 578 MPYSQLQRMAEDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKTT 757
MP+S+L RMA+ K ES + DL+ P NDF ELVWE GQI++QGQS+R RK+
Sbjct: 1 MPFSELYRMAKGKPES-----VQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55
Query: 758 F-NTNPSIGPKGKDGD------ALPSNLKTTHCCLNDFXXXXXXXXXXXXXXEDEVVPWI 916
N+ PS PK +D D + + LNDF +D++VPW+
Sbjct: 56 LSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQ-DDDMVPWL 114
Query: 917 NYPLD-----DYCLEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGS-----HGGAN 1066
NYP+D DYC +F EL GV N S + K + ++ S H G +
Sbjct: 115 NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVS 174
Query: 1067 SEQGNAPKLVRESSE------SRL-----QRCEXXXXXXXXXXXXXXXGCNTNNAQQANC 1213
EQGNA K E S+L Q+C+ +N
Sbjct: 175 LEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVS 234
Query: 1214 GNSSQKAA---GLLNTNTQQQEPKPSRPLSQLSNNTGIVNFSHFLRPATFVKTNRQDGDA 1384
GNS + A G +T TQ+Q+P +R NN+G++NFSHF RPA VK N Q+ A
Sbjct: 235 GNSIRLPASTSGFSSTKTQKQDPGQTR------NNSGLMNFSHFSRPAALVKANLQNIGA 288
Query: 1385 ALVSSSLGNDRLRNNDKGSVVSCSNHIHSTVIDCANASRSLTDCISKPNSFAEKVDGKPY 1564
SS DR+ + DK S N S +D + + D S+P VD KP
Sbjct: 289 IAGPSSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASVDLKPV 348
Query: 1565 MGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTVGMPDNEKYIEPVVAS 1744
+ K EP+ E C+E +S + LG T G+PD EK IEP VA
Sbjct: 349 VAKTMEEPLPAEQSPVICQEGACKNEKSSNQVLG------ARTAKGIPDGEKTIEPAVAC 402
Query: 1745 SSVCSGNNPKGASNDPKQRLKRTSRDTEELDYQSEDIEEESVGVRKPGSARRGASTKRSR 1924
SSVCSGN+ + ASNDPK LKR RDTEE + SED+EEESVGVRK A+ G +KRSR
Sbjct: 403 SSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSR 462
Query: 1925 AAEVHNLSERRRRDRINEKMRALQELIPNCNKVFHLQFPC*PLAHLILFTGHLLHSLQSK 2104
AAEVHNLSERRRRDRINEKMRALQELIPNCNK
Sbjct: 463 AAEVHNLSERRRRDRINEKMRALQELIPNCNK---------------------------- 494
Query: 2105 FGCHV*VDKASMLDEAIEYLKTLQLQVQIMSMGTGLFMPPMMLPNGIPHINAQHLPPFAP 2284
VDKASMLDEAIEYLKTLQLQVQIMSMGTGL MPPMMLP G+ HI+A H+ F P
Sbjct: 495 ------VDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP 548
Query: 2285 M 2287
M
Sbjct: 549 M 549
>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 374 bits (959), Expect = e-101
Identities = 252/601 (41%), Positives = 307/601 (51%), Gaps = 31/601 (5%)
Frame = +2
Query: 578 MPYSQLQRMAEDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKTT 757
MP+S+L RMA+ K ES + DL+ P NDF ELVWE GQI++QGQS+R RK+
Sbjct: 1 MPFSELYRMAKGKPES-----VQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55
Query: 758 F-NTNPSIGPKGKDGD------ALPSNLKTTHCCLNDFXXXXXXXXXXXXXXEDEVVPWI 916
N+ PS PK +D D + + LNDF +D++VPW+
Sbjct: 56 LSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQ-DDDMVPWL 114
Query: 917 NYPLD-----DYCLEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGS-----HGGAN 1066
NYP+D DYC +F EL GV N S + K + ++ S H G +
Sbjct: 115 NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVS 174
Query: 1067 SEQGNAPKLVRESSE------SRL-----QRCEXXXXXXXXXXXXXXXGCNTNNAQQANC 1213
EQGNA K E S+L Q+C+ +N
Sbjct: 175 LEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVS 234
Query: 1214 GNSSQKAA---GLLNTNTQQQEPKPSRPLSQLSNNTGIVNFSHFLRPATFVKTNRQDGDA 1384
GNS + A G +T TQ+Q+P +R NN+G++NFSHF RPA VK N Q+ A
Sbjct: 235 GNSIRLPASTSGFSSTKTQKQDPGQTR------NNSGLMNFSHFSRPAALVKANLQNIGA 288
Query: 1385 ALVSSSLGNDRLRNNDKGSVVSCSNHIHSTVIDCANASRSLTDCISKPNSFAEKVDGKPY 1564
SS DR+ + DK S N S +D + + D S+P VD KP
Sbjct: 289 IAGPSSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASVDLKPV 348
Query: 1565 MGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTVGMPDNEKYIEPVVAS 1744
+ K EP+ PA T G+PD EK IEP VA
Sbjct: 349 VAKTMEEPL---------------------PAEQSPVHLPRRTAKGIPDGEKSIEPAVAC 387
Query: 1745 SSVCSGNNPKGASNDPKQRLKRTSRDTEELDYQSEDIEEESVGVRKPGSARRGASTKRSR 1924
SSVCSGN+ + ASNDPK LKR RDTEE + SED+EEESVGVRK A+ G +KRSR
Sbjct: 388 SSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSR 447
Query: 1925 AAEVHNLSERRRRDRINEKMRALQELIPNCNKVFHLQFPC*PLAHLILFTGHLLHSLQSK 2104
AAEVHNLSERRRRDRINEKMRALQELIPNCNK
Sbjct: 448 AAEVHNLSERRRRDRINEKMRALQELIPNCNK---------------------------- 479
Query: 2105 FGCHV*VDKASMLDEAIEYLKTLQLQVQIMSMGTGLFMPPMMLPNGIPHINAQHLPPFAP 2284
VDKASMLDEAIEYLKTLQLQVQIMSMGTGL MPPMMLP G+ HI+A H+ F P
Sbjct: 480 ------VDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP 533
Query: 2285 M 2287
M
Sbjct: 534 M 534
>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical
protein [Ricinus communis]
Length = 758
Score = 347 bits (889), Expect = 1e-92
Identities = 239/610 (39%), Positives = 309/610 (50%), Gaps = 40/610 (6%)
Frame = +2
Query: 578 MPYSQLQ-RMAEDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKT 754
MP S+L R+++ K +SS+ K T+ DL++ P NDF ELVWENGQI QS+R RK
Sbjct: 1 MPLSELICRLSKGKFDSSSQEKNTTCSTDLSAGPENDFLELVWENGQI----QSSRARKI 56
Query: 755 TFNTNPSIGPKGKDGDAL-----PSNLKTTHCCLNDFXXXXXXXXXXXXXX----EDEVV 907
+ N S K +D D +N K DF ED++V
Sbjct: 57 S-NGVQSQTSKFRDKDISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQEDDMV 115
Query: 908 PWINYPLDD-----YCLEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGSH-----G 1057
PW+N P+DD YC EF +EL GV N AQNS K N VR SH
Sbjct: 116 PWLNDPIDDSLQQDYCHEFLAELSGVTVNEH-AQNSFASSDKKCNGNQSVRDSHTASVHN 174
Query: 1058 GANSEQGNAPKL--------------VRESSESRLQRCEXXXXXXXXXXXXXXXGCNTNN 1195
G + EQG+ P++ + S +Q+C+ N+
Sbjct: 175 GLSLEQGHMPRVSSGRDGDATRSRTTASQLYSSSVQQCQASFPHFRSRISANNAESTNNS 234
Query: 1196 AQQANCGN---SSQKAAGLLNTNTQQQEPKPSRPLSQLSNNTGIVNFSHFLRPATFVKTN 1366
A+ G+ S G + Q+Q P + + N+ ++NFSHF RP K N
Sbjct: 235 THVASSGDPIRGSPSGGGFPSIKAQKQVPVLA------TTNSSLMNFSHFSRPVALAKAN 288
Query: 1367 RQDGDAALVSSSLGNDRLRNNDKGSVVSCSNHIHSTVIDCANASRSLTDCISKPNSFAEK 1546
++ S +R+ + DKGS+ S SN S + + + + T +P + K
Sbjct: 289 FENIGTRAGSGISSIERIGSQDKGSIASSSNPAESMLNETFSGLKKETSSRCRPVMVSSK 348
Query: 1547 VDGKPYMGKPPMEPMCIEHPEA---DCRENTLGKSRSPDPALGQTSSFAVSTTVGMPDNE 1717
VD KP +P EP+ + PEA DC+ + FA S T G+ D E
Sbjct: 349 VDDKPLDHRPAEEPLLAKQPEAMENDCKNDK------------NHCQFAASATKGLADGE 396
Query: 1718 KYIEPVVASSSVCSGNNPKGASNDPKQRLKRTSRDTEELDYQSEDIEEESVGVRKPGSAR 1897
K EP+VASSSVCSGN+ + S++P Q LKR R+TEE + SED+EEESVG +K AR
Sbjct: 397 KTAEPIVASSSVCSGNSMERVSDEPMQNLKRKHRETEESEGPSEDVEEESVGGKKAAPAR 456
Query: 1898 RGASTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVFHLQFPC*PLAHLILFTG 2077
G +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK
Sbjct: 457 GGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK------------------- 497
Query: 2078 HLLHSLQSKFGCHV*VDKASMLDEAIEYLKTLQLQVQIMSMGTGLFMPPMMLPNGIPHIN 2257
VDKASMLDEAIEYLKTLQLQVQIMSMG GL+MP MMLP G+PH++
Sbjct: 498 ---------------VDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGVPHMH 542
Query: 2258 AQHLPPFAPM 2287
H+ F+PM
Sbjct: 543 VAHMSQFSPM 552
>ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|222871472|gb|EEF08603.1|
predicted protein [Populus trichocarpa]
Length = 733
Score = 322 bits (826), Expect = 2e-85
Identities = 239/598 (39%), Positives = 298/598 (49%), Gaps = 36/598 (6%)
Frame = +2
Query: 602 MAEDKLESSTHFKMTSSLADLASI-PHNDFSELVWENGQILLQGQSNRTRKTT-FNTNPS 775
MA+ K++ S K S DL+ + P NDF EL+WENGQI QS+R RK +T P
Sbjct: 1 MAKGKIDFSQE-KDPSCSTDLSFVRPENDFGELIWENGQI----QSSRARKIQPCSTLPC 55
Query: 776 IGPK------GKDGDALPSNLKTTHCCLNDFXXXXXXXXXXXXXXEDEVVPWINYPLD-- 931
PK G D LN+ +D++VPW+NYPLD
Sbjct: 56 QNPKIRYKDIGNGTDIRTGKFGMMESTLNELPMSVPAVEMGVNQ-DDDMVPWLNYPLDES 114
Query: 932 ---DYCLEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGS-----HGGANSEQGNAP 1087
DYC EF EL GV N S+Q++ P ++ VR S H G + EQG+
Sbjct: 115 PQHDYCSEFLPELSGVTVNGHSSQSN-FPSFGKKSFSQSVRDSRTVSVHNGLSLEQGDVA 173
Query: 1088 KLVR---------ESSESRL-----QRCEXXXXXXXXXXXXXXXGCNTNNAQQANCGNSS 1225
K +S S+L + C+ G +T+NA S
Sbjct: 174 KNSSAGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKN-GDSTSNAAHHVVSVDS 232
Query: 1226 QKA----AGLLNTNTQQQEPKPSRPLSQLSNNTGIVNFSHFLRPATFVKTNRQDGDAALV 1393
+A G + Q+Q P +Q + N+ ++NFSHF RPA K N Q+
Sbjct: 233 IRAPTSGGGFPSIKMQKQVP------AQSTTNSSLMNFSHFARPAALAKANLQNIGMRAG 286
Query: 1394 SSSLGNDRLRNNDKGSVVSCSNHIHSTVIDCANASRSLTDCISKPNSFAEKVDGKPYMGK 1573
+ +R +N DKGS+ S SN T I+ + T P KVD KP K
Sbjct: 287 TGISNMERTQNKDKGSIASSSNPAECTPINSCSGLLKETSSHCLPVLMPPKVDAKPSEAK 346
Query: 1574 PPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTVGMPDNEKYIEPVVASSSV 1753
P + E PEA E G S+S +F S G+ D EK EPVVASSSV
Sbjct: 347 PAEGFVPAELPEATIPE---GDSKSDRNC---RQNFCESAIKGVADVEKTKEPVVASSSV 400
Query: 1754 CSGNNPKGASNDPKQRLKRTSRDTEELDYQSEDIEEESVGVRKPGSARRGASTKRSRAAE 1933
S N+ + AS+DP + LKR RDTEE + SED+EEESVG +K AR G +KR+RAAE
Sbjct: 401 GSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAE 460
Query: 1934 VHNLSERRRRDRINEKMRALQELIPNCNKVFHLQFPC*PLAHLILFTGHLLHSLQSKFGC 2113
VHNLSERRRRDRINEKMRALQELIPNCNK
Sbjct: 461 VHNLSERRRRDRINEKMRALQELIPNCNK------------------------------- 489
Query: 2114 HV*VDKASMLDEAIEYLKTLQLQVQIMSMGTGLFMPPMMLPNGIPHINAQHLPPFAPM 2287
VDKASMLDEAIEYLKTLQLQVQIMSMG GL+MP MMLP G+PH++A H+ F PM
Sbjct: 490 ---VDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPHMHAAHMGQFLPM 544
>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription
factor PIF3-like [Cucumis sativus]
Length = 696
Score = 298 bits (762), Expect = 6e-78
Identities = 232/608 (38%), Positives = 299/608 (49%), Gaps = 42/608 (6%)
Frame = +2
Query: 578 MPYSQLQRMAEDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRK-T 754
MP S+L R+A KL+S+ D S+ ND ELVWENGQILLQGQSNR RK +
Sbjct: 1 MPLSELYRVARGKLDSTQ---------DKNSM--NDVFELVWENGQILLQGQSNRPRKNS 49
Query: 755 TFNTN-----PSIGPKGKDGD------ALPSNLKTTHCCLND-FXXXXXXXXXXXXXXED 898
NT+ PS P+ +D D A + D +D
Sbjct: 50 NLNTSQAQCLPSHSPRDRDRDVGYFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHDDDD 109
Query: 899 EVVPWINYPLD-----DYCLEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVR------ 1045
++VPW++YPLD DY +F EL GV N F ++NS + + G+ V
Sbjct: 110 DMVPWLSYPLDGHLQHDYSSDFLPELSGVTVNDFPSRNSIASSIGKASGGNQVNRERDMH 169
Query: 1046 -GSHGGANSEQGNAPKLV--------RESSESRLQRCEXXXXXXXXXXXXXXXGCNTNNA 1198
S GAN E GN KL SS ++L T N
Sbjct: 170 LNSMHGANLEDGNISKLSSLDVSAARARSSTNQLHSSASQQSQTSFPHLRTKCAGETENT 229
Query: 1199 -----QQANCGNSSQK---AAGLLNTNTQQQEPKPSRPLSQLSNNTGIVNFSHFLRPATF 1354
+ G+S Q A+ + Q+ +P P +N++ I+NFSHFLRPA+
Sbjct: 230 TGKMLHDSLVGHSPQVPLIASSSSSIAKQKLDPTPP------NNSSNIINFSHFLRPASL 283
Query: 1355 VKTNRQDGDAALVSSSLGNDRLRNNDKGSVVSCSNHIHSTVIDCANASRSLTDCISKPNS 1534
+K+N Q S D + NN S + S S++I R+ ++ K N+
Sbjct: 284 LKSNPQKHGVPGTGGSRNLDSMVNN---SSAANSQPHESSLIAIQGGIRNESNSGCK-NA 339
Query: 1535 FAEKVDGK-PYMGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTVGMPD 1711
+DGK P KP + + PEA C LG S D L F V T G+ D
Sbjct: 340 VVPTIDGKSPSDAKPLEQSQTNKQPEAAC----LGDSADHDDRL--KHRFEVGATKGLAD 393
Query: 1712 NEKYIEPVVASSSVCSGNNPKGASNDPKQRLKRTSRDTEELDYQSEDIEEESVGVRKPGS 1891
+EK +E V A +S+CS N+ +GAS+DP KR DTE+ ++ S+D+EE+ V++ S
Sbjct: 394 SEKAVESVFA-ASLCSRNSVEGASDDPPHNRKRKCHDTEDSEWHSDDVEEDCNDVKRVTS 452
Query: 1892 ARRGASTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVFHLQFPC*PLAHLILF 2071
A RGA +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK
Sbjct: 453 A-RGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK----------------- 494
Query: 2072 TGHLLHSLQSKFGCHV*VDKASMLDEAIEYLKTLQLQVQIMSMGTGLFMPPMMLPNGIPH 2251
VDKASMLDEAIEYLKTLQLQVQIMSMG GLFMPPMM P +
Sbjct: 495 -----------------VDKASMLDEAIEYLKTLQLQVQIMSMGAGLFMPPMMFPGAMAP 537
Query: 2252 INAQHLPP 2275
+N H+ P
Sbjct: 538 MNTPHIYP 545