BLASTX nr result

ID: Coptis25_contig00000701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000701
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866815.1| ER lumen protein retaining receptor family p...   244   2e-96
ref|XP_002273333.1| PREDICTED: ER lumen protein retaining recept...   244   2e-96
ref|XP_004136381.1| PREDICTED: ER lumen protein retaining recept...   244   2e-96
emb|CBI37937.3| unnamed protein product [Vitis vinifera]              244   2e-96
ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|2...   246   7e-96

>ref|XP_002866815.1| ER lumen protein retaining receptor family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297312651|gb|EFH43074.1| ER
           lumen protein retaining receptor family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  244 bits (623), Expect(2) = 2e-96
 Identities = 117/128 (91%), Positives = 122/128 (95%)
 Frame = -1

Query: 722 CAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 543
           C VLA+ IHPSTSHHI NRI WA CVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA
Sbjct: 146 CVVLAVFIHPSTSHHILNRISWALCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 205

Query: 542 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLV 363
           RFLSCAHWVLQV+DTRGRLL ALGYGLWPSMVL+SEIVQTFILADFCYYY+KS+FGGQLV
Sbjct: 206 RFLSCAHWVLQVVDTRGRLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLV 265

Query: 362 LRLPSGVV 339
           LRLPSGVV
Sbjct: 266 LRLPSGVV 273



 Score =  135 bits (340), Expect(2) = 2e-96
 Identities = 66/88 (75%), Positives = 73/88 (82%)
 Frame = -2

Query: 1024 AVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXX 845
            AVH+IGICVLIYKL KE+TCAGLSLKSQ LTAIFLAVRLYCSFVMEYDIH          
Sbjct: 55   AVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGT 114

Query: 844  XLWVMYTIHFQLKSSYMEDKDNFPLYYV 761
             LWV++ I F+L++SYMEDKDNFPLYYV
Sbjct: 115  TLWVIFMIRFKLRASYMEDKDNFPLYYV 142


>ref|XP_002273333.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera]
          Length = 272

 Score =  244 bits (623), Expect(2) = 2e-96
 Identities = 118/128 (92%), Positives = 122/128 (95%)
 Frame = -1

Query: 722 CAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 543
           CA+LALVIHPSTSHH  NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA
Sbjct: 145 CALLALVIHPSTSHHFVNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 204

Query: 542 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLV 363
           RFLSCAHWVLQVLDTRG LL ALGYGLWPSMVL+SEIVQTFILADFCYYY+KS+ GGQLV
Sbjct: 205 RFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYIKSVVGGQLV 264

Query: 362 LRLPSGVV 339
           LRLPSGVV
Sbjct: 265 LRLPSGVV 272



 Score =  135 bits (340), Expect(2) = 2e-96
 Identities = 67/88 (76%), Positives = 72/88 (81%)
 Frame = -2

Query: 1024 AVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXX 845
            AVH+IGICVLIYKL KE+TCAGLSLKSQ LTAIFLAVRLYCSFVMEYDIH          
Sbjct: 54   AVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLGT 113

Query: 844  XLWVMYTIHFQLKSSYMEDKDNFPLYYV 761
             LWV+Y I F+LKSSYMEDKDNF +YYV
Sbjct: 114  TLWVIYMIRFRLKSSYMEDKDNFAIYYV 141


>ref|XP_004136381.1| PREDICTED: ER lumen protein retaining receptor-like [Cucumis
           sativus] gi|449505760|ref|XP_004162562.1| PREDICTED: ER
           lumen protein retaining receptor-like [Cucumis sativus]
          Length = 272

 Score =  244 bits (622), Expect(2) = 2e-96
 Identities = 118/128 (92%), Positives = 123/128 (96%)
 Frame = -1

Query: 722 CAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 543
           CA+L+ VIHP+T H+I NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA
Sbjct: 145 CALLSFVIHPTTVHNIINRIAWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 204

Query: 542 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLV 363
           RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYY+KSL GGQLV
Sbjct: 205 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLV 264

Query: 362 LRLPSGVV 339
           LRLPSGVV
Sbjct: 265 LRLPSGVV 272



 Score =  135 bits (341), Expect(2) = 2e-96
 Identities = 68/88 (77%), Positives = 72/88 (81%)
 Frame = -2

Query: 1024 AVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXX 845
            AVHAIGI VLIYKL KERTCAGLSLKSQ LTAIFLAVRLYCSFVMEYDIH          
Sbjct: 54   AVHAIGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDTATLVT 113

Query: 844  XLWVMYTIHFQLKSSYMEDKDNFPLYYV 761
             LWV+Y I F+L+SSYMEDKDNFP+YYV
Sbjct: 114  TLWVIYMIRFKLRSSYMEDKDNFPIYYV 141


>emb|CBI37937.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  244 bits (623), Expect(2) = 2e-96
 Identities = 118/128 (92%), Positives = 122/128 (95%)
 Frame = -1

Query: 722 CAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 543
           CA+LALVIHPSTSHH  NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA
Sbjct: 114 CALLALVIHPSTSHHFVNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 173

Query: 542 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLV 363
           RFLSCAHWVLQVLDTRG LL ALGYGLWPSMVL+SEIVQTFILADFCYYY+KS+ GGQLV
Sbjct: 174 RFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYIKSVVGGQLV 233

Query: 362 LRLPSGVV 339
           LRLPSGVV
Sbjct: 234 LRLPSGVV 241



 Score =  135 bits (340), Expect(2) = 2e-96
 Identities = 67/88 (76%), Positives = 72/88 (81%)
 Frame = -2

Query: 1024 AVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXX 845
            AVH+IGICVLIYKL KE+TCAGLSLKSQ LTAIFLAVRLYCSFVMEYDIH          
Sbjct: 23   AVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLGT 82

Query: 844  XLWVMYTIHFQLKSSYMEDKDNFPLYYV 761
             LWV+Y I F+LKSSYMEDKDNF +YYV
Sbjct: 83   TLWVIYMIRFRLKSSYMEDKDNFAIYYV 110


>ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|222849129|gb|EEE86676.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  246 bits (627), Expect(2) = 7e-96
 Identities = 118/128 (92%), Positives = 124/128 (96%)
 Frame = -1

Query: 722 CAVLALVIHPSTSHHIFNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 543
           CAVLAL+IHPSTSH++ NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA
Sbjct: 145 CAVLALLIHPSTSHNLLNRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVA 204

Query: 542 RFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYMKSLFGGQLV 363
           RFLSCAHWVLQVLDTRG LL ALGYGLWPSMVL+SEIVQTFILADFCYYY+KS+FGGQLV
Sbjct: 205 RFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLV 264

Query: 362 LRLPSGVV 339
           LRLPSGVV
Sbjct: 265 LRLPSGVV 272



 Score =  132 bits (332), Expect(2) = 7e-96
 Identities = 66/88 (75%), Positives = 72/88 (81%)
 Frame = -2

Query: 1024 AVHAIGICVLIYKLTKERTCAGLSLKSQTLTAIFLAVRLYCSFVMEYDIHXXXXXXXXXX 845
            AVH+IGI VLIYKL KE+TCAGLSLK+Q LTA+FLAVRLYCSFVMEYDIH          
Sbjct: 54   AVHSIGISVLIYKLMKEKTCAGLSLKTQELTAMFLAVRLYCSFVMEYDIHTVLDLATLAT 113

Query: 844  XLWVMYTIHFQLKSSYMEDKDNFPLYYV 761
             LWV+YTI F+LKSSYMEDKDNF LYYV
Sbjct: 114  TLWVIYTIRFKLKSSYMEDKDNFALYYV 141


Top