BLASTX nr result

ID: Coptis25_contig00000695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000695
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872048.1| hypothetical protein ARALYDRAFT_489189 [Arab...   127   3e-27
ref|XP_003536737.1| PREDICTED: transcription factor TCP7-like [G...   122   6e-26
ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [V...   118   1e-24
ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [C...   117   2e-24
ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycoper...   117   3e-24

>ref|XP_002872048.1| hypothetical protein ARALYDRAFT_489189 [Arabidopsis lyrata subsp.
           lyrata] gi|297317885|gb|EFH48307.1| hypothetical protein
           ARALYDRAFT_489189 [Arabidopsis lyrata subsp. lyrata]
          Length = 243

 Score =  127 bits (318), Expect = 3e-27
 Identities = 77/139 (55%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
 Frame = -3

Query: 627 NMSTEGV---SNGMEQQQTNTNGVKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQEL 457
           N + +GV   SNG   +Q ++  VKKPP+KDRHSKVDGR  RIRMPIICAARVFQLT+EL
Sbjct: 6   NNNNDGVMISSNGALIEQPSSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTREL 65

Query: 456 GHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXSFSAVSLFVRISSTPSLSASLVHKPSPHN 277
           GHKSDGQ IEWLLRQAE              SFS  S+ +R +S+ SLS+SL HKP+   
Sbjct: 66  GHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGTSSTSLSSSLDHKPT--- 122

Query: 276 HNLNNTSKKDILIARSKAD 220
            +L   S   IL  R +AD
Sbjct: 123 -SLLGGSSPFILGKRVRAD 140


>ref|XP_003536737.1| PREDICTED: transcription factor TCP7-like [Glycine max]
          Length = 246

 Score =  122 bits (307), Expect = 6e-26
 Identities = 71/115 (61%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
 Frame = -3

Query: 621 STEGVSNG--MEQQQTNTNGVKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQELGHK 448
           +T GVSNG  ++ Q+     VKKPPSKDRHSKVDGR  RIRMPIICAARVFQLT+ELGHK
Sbjct: 7   TTNGVSNGAIIDAQRQQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHK 66

Query: 447 SDGQAIEWLLRQAEXXXXXXXXXXXXXXSFSAVSLFVR--ISSTPSLSASLVHKP 289
           SDGQ IEWLLRQAE              SFS+VSL VR   +S  S S++  HKP
Sbjct: 67  SDGQTIEWLLRQAEPSIIAATGSGTTPASFSSVSLSVRAAANSLSSPSSTSDHKP 121


>ref|XP_002268058.1| PREDICTED: transcription factor TCP7-like [Vitis vinifera]
          Length = 255

 Score =  118 bits (295), Expect = 1e-24
 Identities = 71/119 (59%), Positives = 81/119 (68%), Gaps = 7/119 (5%)
 Frame = -3

Query: 621 STEGVSNGM----EQQQTNTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQ 463
           +  GV+NG     ++QQ   NG   VKKPP+KDRHSKVDGR  RIRMPIICAARVFQLT+
Sbjct: 7   AANGVTNGAIVDSQRQQQPGNGALAVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTR 66

Query: 462 ELGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXSFSAVSLFVRISSTPSLSASLVHKPS 286
           ELGHKSDGQ IEWLLRQAE              SFS+VS+ VR   + S SA+L  KPS
Sbjct: 67  ELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGSTS-SAALDQKPS 124


>ref|XP_004143620.1| PREDICTED: transcription factor TCP7-like [Cucumis sativus]
           gi|449528835|ref|XP_004171408.1| PREDICTED:
           transcription factor TCP7-like [Cucumis sativus]
          Length = 256

 Score =  117 bits (293), Expect = 2e-24
 Identities = 68/112 (60%), Positives = 76/112 (67%), Gaps = 7/112 (6%)
 Frame = -3

Query: 618 TEGVSNGM----EQQQTNTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAARVFQLTQE 460
           T GVSNG      +  +++NG   VKKPPSKDRHSKVDGR  RIRMPIICAARVFQLT+E
Sbjct: 7   TNGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRE 66

Query: 459 LGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXSFSAVSLFVRISSTPSLSAS 304
           LGHKSDGQ IEWLLRQAE              +FS+VSL VR +   S S S
Sbjct: 67  LGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLS 118


>ref|NP_001234581.1| TCP transcription factor 14 [Solanum lycopersicum]
           gi|306416839|gb|ADM87263.1| TCP transcription factor 14
           [Solanum lycopersicum]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24
 Identities = 81/165 (49%), Positives = 92/165 (55%), Gaps = 31/165 (18%)
 Frame = -3

Query: 624 MSTEGVSNGM------EQQQT----NTNG---VKKPPSKDRHSKVDGRRWRIRMPIICAA 484
           MST    NG       +QQQ      TNG   VKKPP KDRHSKVDGR  RIRMPI+CAA
Sbjct: 1   MSTSAEGNGAIIDPQRQQQQAPTGVGTNGALTVKKPPVKDRHSKVDGRGRRIRMPIVCAA 60

Query: 483 RVFQLTQELGHKSDGQAIEWLLRQAEXXXXXXXXXXXXXXSFSAVSLFVRISS---TPSL 313
           RVFQLT+ELGHKSDGQ IEWLLRQAE              SFS VS+ VR S+     SL
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPASFSTVSVSVRNSTASLVSSL 120

Query: 312 SASLVHK------PSP---------HNHNLNNTSKKDILIARSKA 223
           SA L  K      P+P          + N+ N +K D+ +A   A
Sbjct: 121 SAPLDQKSSQMISPAPFILGKRLRSDDENIENGNKDDVAVAAGGA 165


Top