BLASTX nr result

ID: Coptis25_contig00000693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000693
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit...   501   e-140
ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...   500   e-139
ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD,...   494   e-137
ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD,...   491   e-136
ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2...   488   e-136

>sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit ChlD, chloroplastic;
           Short=Mg-chelatase subunit D; AltName:
           Full=Mg-protoporphyrin IX chelatase subunit ChlD; Flags:
           Precursor gi|2239151|emb|CAA71128.1| CHLD magnesium
           chelatase subunit [Nicotiana tabacum]
          Length = 758

 Score =  501 bits (1290), Expect = e-140
 Identities = 249/300 (83%), Positives = 277/300 (92%)
 Frame = +3

Query: 3   ESVNGAASVVSEPKNEEQTQYGRQYFPLAAVVGQDAIKTALLLGAVDREIGGIAISGKRG 182
           +S NGA +VV   K  E+  +GRQYFPLAAV+GQDAIKTALLLGA+DREIGGIAI GKRG
Sbjct: 55  DSPNGAVAVVEPEKQPEKISFGRQYFPLAAVIGQDAIKTALLLGAIDREIGGIAICGKRG 114

Query: 183 TAKTVMARGLHAVLPPIEVVVGSFSNADPTCPEEWEDGLSEKLEYDAAGNMKTTIVRSPF 362
           TAKT+MARGLHA+LPPIEVVVGS +NADP CP+EWEDGL+++ EY + GN+KT IV+SPF
Sbjct: 115 TAKTLMARGLHAILPPIEVVVGSMANADPNCPDEWEDGLADRAEYGSDGNIKTQIVKSPF 174

Query: 363 VPILLAVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 542
           V I L VTEDRLIGSVDVEESVK+GTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN
Sbjct: 175 VQIPLGVTEDRLIGSVDVEESVKSGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 234

Query: 543 VLSEGVNTVEREGISFQHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVA 722
           VL+EGVN VEREGISF+HPCKPLLIATYNPEEG+VREHLLDRIAINLSADLPMSFD+RVA
Sbjct: 235 VLTEGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMSFDDRVA 294

Query: 723 AVGIATKFQECSNEVFKMVGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 902
           AV IAT+FQECSNEVFKMV EETD A+TQIILAREYLKDV++SR+QLKYLVMEA+RGGC+
Sbjct: 295 AVDIATRFQECSNEVFKMVDEETDSAKTQIILAREYLKDVTISRDQLKYLVMEAIRGGCQ 354


>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score =  500 bits (1287), Expect = e-139
 Identities = 252/300 (84%), Positives = 280/300 (93%)
 Frame = +3

Query: 3   ESVNGAASVVSEPKNEEQTQYGRQYFPLAAVVGQDAIKTALLLGAVDREIGGIAISGKRG 182
           +S NGA  VVS  +N + + YGRQYFPLAAVVGQDAIKTALLLGA+DREIGGIAISGKRG
Sbjct: 67  QSTNGA--VVSPSQNPDSSSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRG 124

Query: 183 TAKTVMARGLHAVLPPIEVVVGSFSNADPTCPEEWEDGLSEKLEYDAAGNMKTTIVRSPF 362
           TAKTVMARGLHA+LPPI+VVVGS +NADP+CPEEWEDGL+E++EYD+ GN+KT +VRSPF
Sbjct: 125 TAKTVMARGLHAILPPIDVVVGSIANADPSCPEEWEDGLAERVEYDSDGNIKTEVVRSPF 184

Query: 363 VPILLAVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 542
           V I L VTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN
Sbjct: 185 VQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 244

Query: 543 VLSEGVNTVEREGISFQHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVA 722
           VL+EGVN VEREGISF+HPCKPLLIATYNPEEG+VREHLLDRIAINLSADLPM+F++RVA
Sbjct: 245 VLTEGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVA 304

Query: 723 AVGIATKFQECSNEVFKMVGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 902
           AVGIAT+FQE   EVFKMV EET+ A+TQIILAREYLKDV+VSR+QLKYLV+EALRGGC+
Sbjct: 305 AVGIATQFQEHCTEVFKMVEEETEFAKTQIILAREYLKDVTVSRDQLKYLVLEALRGGCQ 364


>ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic-like
           [Cucumis sativus]
          Length = 748

 Score =  494 bits (1271), Expect = e-137
 Identities = 247/299 (82%), Positives = 277/299 (92%)
 Frame = +3

Query: 6   SVNGAASVVSEPKNEEQTQYGRQYFPLAAVVGQDAIKTALLLGAVDREIGGIAISGKRGT 185
           S NGA +   +P   E T YGRQYFPLAAVVGQDAIKTALLLGA+DREIGGIAISGKRGT
Sbjct: 53  SSNGAVAAADQP---ETTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGT 109

Query: 186 AKTVMARGLHAVLPPIEVVVGSFSNADPTCPEEWEDGLSEKLEYDAAGNMKTTIVRSPFV 365
           AKTVMARGLHAVLPPIEVVVGS SNADP+CPEEWEDGL++++EYD+AGN+KT IV++PF+
Sbjct: 110 AKTVMARGLHAVLPPIEVVVGSISNADPSCPEEWEDGLADRVEYDSAGNIKTQIVKTPFI 169

Query: 366 PILLAVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNV 545
            I L VTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNV
Sbjct: 170 QIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNV 229

Query: 546 LSEGVNTVEREGISFQHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAA 725
           L+EGVN VEREGISF+HPCKPLLIATYNPEEG+VREHLLDRIA+NLSADLPMSF++RVAA
Sbjct: 230 LTEGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRIALNLSADLPMSFEDRVAA 289

Query: 726 VGIATKFQECSNEVFKMVGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 902
           VGIAT+FQE S EV KMV +E ++A+TQIIL+REYLKDV++ REQLKYLV+EA+RGGC+
Sbjct: 290 VGIATQFQEQSKEVLKMVEDEIEVAKTQIILSREYLKDVTIGREQLKYLVLEAIRGGCQ 348


>ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Glycine max]
          Length = 750

 Score =  491 bits (1263), Expect = e-136
 Identities = 250/300 (83%), Positives = 276/300 (92%)
 Frame = +3

Query: 3   ESVNGAASVVSEPKNEEQTQYGRQYFPLAAVVGQDAIKTALLLGAVDREIGGIAISGKRG 182
           +S NGA     +P     T YGRQYFPLAAVVGQDAIKTALLLGA+D  IGGIAISGKRG
Sbjct: 56  QSENGALVTSEKPG----TNYGRQYFPLAAVVGQDAIKTALLLGAIDPGIGGIAISGKRG 111

Query: 183 TAKTVMARGLHAVLPPIEVVVGSFSNADPTCPEEWEDGLSEKLEYDAAGNMKTTIVRSPF 362
           TAKTVMARGLHA+LPPIEVVVGS +NADPTCPEEWEDGL+E LEYD+AGN+KT I++SPF
Sbjct: 112 TAKTVMARGLHAILPPIEVVVGSIANADPTCPEEWEDGLTECLEYDSAGNIKTRIIKSPF 171

Query: 363 VPILLAVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 542
           V I L +TEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN
Sbjct: 172 VQIPLGITEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLN 231

Query: 543 VLSEGVNTVEREGISFQHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVA 722
           VLSEGVNTVEREGISF+HPC+PLLIATYNPEEG+VREHLLDRIAINLSADLPMSF+ RVA
Sbjct: 232 VLSEGVNTVEREGISFKHPCRPLLIATYNPEEGAVREHLLDRIAINLSADLPMSFENRVA 291

Query: 723 AVGIATKFQECSNEVFKMVGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 902
           AVGIAT+FQE S++VF+MV EETD A+TQIILAREYLKDV+++R+QLKYLV+EALRGGC+
Sbjct: 292 AVGIATEFQENSSQVFEMVEEETDNAKTQIILAREYLKDVTLNRDQLKYLVIEALRGGCQ 351


>ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  488 bits (1256), Expect = e-136
 Identities = 245/301 (81%), Positives = 276/301 (91%), Gaps = 1/301 (0%)
 Frame = +3

Query: 3   ESVNGAASVVSEPKNE-EQTQYGRQYFPLAAVVGQDAIKTALLLGAVDREIGGIAISGKR 179
           +S NGA +  +    + + + YGRQYFPLAAVVGQDAIKTALLLGA+DREIGGIAISGKR
Sbjct: 66  QSGNGAVATPNTATEKLDSSYYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKR 125

Query: 180 GTAKTVMARGLHAVLPPIEVVVGSFSNADPTCPEEWEDGLSEKLEYDAAGNMKTTIVRSP 359
           GTAKTVMARGLH VLPPI+VV+GS +NADP CPEEWEDGL+E++EYD+ GN+KT +VRSP
Sbjct: 126 GTAKTVMARGLHEVLPPIDVVMGSIANADPVCPEEWEDGLAEQVEYDSDGNIKTQVVRSP 185

Query: 360 FVPILLAVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLL 539
           F+ I L VTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLL
Sbjct: 186 FIQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLL 245

Query: 540 NVLSEGVNTVEREGISFQHPCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERV 719
           NVL+EGVN VEREGISF+HPCKPLLIATYNPEEG+VREHLLDRIAINLSADLPM+F++RV
Sbjct: 246 NVLTEGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRV 305

Query: 720 AAVGIATKFQECSNEVFKMVGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGC 899
           AAVGIAT+FQE  NEVFKMV EET+ A+TQIILAREYLKDV++ REQLKYLV+EA+RGGC
Sbjct: 306 AAVGIATQFQEHINEVFKMVEEETEYAKTQIILAREYLKDVTIGREQLKYLVLEAIRGGC 365

Query: 900 E 902
           +
Sbjct: 366 Q 366


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