BLASTX nr result
ID: Coptis25_contig00000692
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000692 (2177 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-lik... 908 0.0 gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] 900 0.0 ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 898 0.0 ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-lik... 898 0.0 ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|2... 894 0.0 >ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-like [Vitis vinifera] Length = 583 Score = 908 bits (2347), Expect = 0.0 Identities = 432/560 (77%), Positives = 471/560 (84%), Gaps = 1/560 (0%) Frame = +1 Query: 280 DSXXXXXXXXSKTSAPKIDDTTYALANLSEN-KPIDPSQRVITYNPTYDQLWAPIYGPAH 456 DS SK+SAPK+DDTT ALA + N KPIDP Q V+ +NPTYDQLWAPIYGPAH Sbjct: 31 DSSPTRIALPSKSSAPKVDDTTLALAIANTNDKPIDPIQHVVPFNPTYDQLWAPIYGPAH 90 Query: 457 PYAKDGIAQGMRNHKLGFVENAAIEPFLFDEQYNTFHKYGYAADPSAMSGDNMVGDMEKM 636 PYAKDGIAQGMRNHKLGFVENAAIEPF+FDEQYNTFHKYGYAADPSA +G+N VGD+E + Sbjct: 91 PYAKDGIAQGMRNHKLGFVENAAIEPFIFDEQYNTFHKYGYAADPSASAGNNYVGDLEAL 150 Query: 637 KENDGISVYNISQSXXXXXXXXXXXXXXXGDESGDMDEDFDLEGVDNPATEEWLKKNRKS 816 ++NDGISVYNI Q + + +ED D+E V NPAT+ WL KN+KS Sbjct: 151 EKNDGISVYNIPQHEQKKRKIEKKK-----ESESEENEDVDVEEVQNPATDTWLLKNKKS 205 Query: 817 PWSGKKEGLVVELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDKSMFHGKEEKDYQGR 996 PW+GKKEGL ELT V DKS FHGKEE+DYQGR Sbjct: 206 PWAGKKEGLQTELTEEQKKYAEEYAKKKGEEKGAAEKGEF--VTDKSTFHGKEERDYQGR 263 Query: 997 SWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFPKHGHLLLSAGMDSKVKIWDV 1176 SWIA PKDAKA N+ CYIPKR +HTWSGHTKGVSAIRFFPKHGHL+LSAGMD+KVKIWDV Sbjct: 264 SWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDV 323 Query: 1177 FNSGKCMRTYMGHGKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGQVISSFSTGKIPYV 1356 FNSGKCMRTYMGH KAVRDISF NDGTKFL+AGYDKNIKYWDTETGQVIS+FSTGKIPYV Sbjct: 324 FNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV 383 Query: 1357 VKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDDNRRFVTSSD 1536 VKLNPDDDKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNTITFVD+NRRFVTSSD Sbjct: 384 VKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD 443 Query: 1537 DKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRDRFQLNK 1716 DKSLRVWEFGIPVVIKYISEPHMHSMP+ISLHPN+NWLAAQSLDNQILIYSTR+RFQLNK Sbjct: 444 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 503 Query: 1717 KKRFAGHIVAGYACQVNFSPDGQYVMSGDGEGNCWYWNWKTCKVSRKLRCHDGVCIGCEW 1896 KKRFAGHI AGYACQVNFSPDG++VMSGDGEG CW+W+WK+CKV R L+CH+GVCIGCEW Sbjct: 504 KKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 563 Query: 1897 HPLEQSKVATCGWDGMIHYW 1956 HPLEQSKVATCGWDG+I YW Sbjct: 564 HPLEQSKVATCGWDGLIKYW 583 >gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] Length = 581 Score = 900 bits (2327), Expect = 0.0 Identities = 426/554 (76%), Positives = 470/554 (84%), Gaps = 4/554 (0%) Frame = +1 Query: 310 SKTSAPKIDDTTYAL----ANLSENKPIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGI 477 SKTSAPK+DDT AL AN + +KPIDP+Q ++ +NPTYDQLWAPIYGP+HPYAKDGI Sbjct: 34 SKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGI 93 Query: 478 AQGMRNHKLGFVENAAIEPFLFDEQYNTFHKYGYAADPSAMSGDNMVGDMEKMKENDGIS 657 AQGMRNHKLGFVENA+IEPF+FDEQYNTFHKYGYAADPSA +G+N +GDME +++ND IS Sbjct: 94 AQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALQKNDAIS 153 Query: 658 VYNISQSXXXXXXXXXXXXXXXGDESGDMDEDFDLEGVDNPATEEWLKKNRKSPWSGKKE 837 VYNI Q E+ DM+E+ + VDNPA++ WL KNRKSPWSGKKE Sbjct: 154 VYNIPQHEQKKRKIEKKKEM---SENEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKE 210 Query: 838 GLVVELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDKSMFHGKEEKDYQGRSWIAAPK 1017 GL ELT DKS FHGKEE+DYQGRSWIA PK Sbjct: 211 GLQTELTEEQKKYAEEYAKKKGEEKGGEKGEV---TADKSTFHGKEERDYQGRSWIAPPK 267 Query: 1018 DAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFPKHGHLLLSAGMDSKVKIWDVFNSGKCM 1197 DAKA N+ CYIPKR +HTWSGHTKGVSAIRFFPKHGHL+LSAGMD+KVKIWDVFNSGKCM Sbjct: 268 DAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCM 327 Query: 1198 RTYMGHGKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDD 1377 RTYMGH +AVRDISF NDG+KFL+AGYDK IKYWDTETGQVIS+FSTGKIPYVVKLNPDD Sbjct: 328 RTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDD 387 Query: 1378 DKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVW 1557 DKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVW Sbjct: 388 DKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 447 Query: 1558 EFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRDRFQLNKKKRFAGH 1737 EFGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTR+RFQLNKKKRFAGH Sbjct: 448 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 507 Query: 1738 IVAGYACQVNFSPDGQYVMSGDGEGNCWYWNWKTCKVSRKLRCHDGVCIGCEWHPLEQSK 1917 IVAGYACQVNFSPDG++VMSGDGEG CW+W+WKTCKV R L+CH+GVCIGCEWHPLEQSK Sbjct: 508 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 567 Query: 1918 VATCGWDGMIHYWD 1959 VATCGWDG+I YWD Sbjct: 568 VATCGWDGLIKYWD 581 >ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like [Cucumis sativus] Length = 580 Score = 898 bits (2320), Expect = 0.0 Identities = 426/553 (77%), Positives = 470/553 (84%), Gaps = 4/553 (0%) Frame = +1 Query: 310 SKTSAPKIDDTTYAL----ANLSENKPIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGI 477 SKTSAPK+DDT AL AN + +KPIDP+Q ++ +NPTYDQLWAPIYGP+HPYAKDGI Sbjct: 34 SKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGI 93 Query: 478 AQGMRNHKLGFVENAAIEPFLFDEQYNTFHKYGYAADPSAMSGDNMVGDMEKMKENDGIS 657 AQGMRNHKLGFVENA+IEPF+FDEQYNTFHKYGYAADPSA +G+N +GDME +++ND IS Sbjct: 94 AQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAIS 153 Query: 658 VYNISQSXXXXXXXXXXXXXXXGDESGDMDEDFDLEGVDNPATEEWLKKNRKSPWSGKKE 837 VYNI Q E+ DM+E+ + VDNPA++ WL KNRKSPWSGKKE Sbjct: 154 VYNIPQHEQKKRKIEKKKKX---SENEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKE 210 Query: 838 GLVVELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDKSMFHGKEEKDYQGRSWIAAPK 1017 GL ELT DKS FHGKEE+DYQGRSWIA PK Sbjct: 211 GLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTS---DKSTFHGKEERDYQGRSWIAPPK 267 Query: 1018 DAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFPKHGHLLLSAGMDSKVKIWDVFNSGKCM 1197 DAKA N+ CYIPKR +HTWSGHTKGVSAIRFFPKHGHL+LSAGMD+KVKIWDVFNSGKCM Sbjct: 268 DAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCM 327 Query: 1198 RTYMGHGKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDD 1377 RTYMGH +AVRDISF NDG+KFL+AGYDK IKYWDTETGQVIS+FSTGKIPYVVKLNPDD Sbjct: 328 RTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDD 387 Query: 1378 DKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVW 1557 DKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVW Sbjct: 388 DKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 447 Query: 1558 EFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRDRFQLNKKKRFAGH 1737 EFGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTR+RFQLNKKKRFAGH Sbjct: 448 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 507 Query: 1738 IVAGYACQVNFSPDGQYVMSGDGEGNCWYWNWKTCKVSRKLRCHDGVCIGCEWHPLEQSK 1917 IVAGYACQVNFSPDG++VMSGDGEG CW+W+WKTCKV R L+CH+GVCIGCEWHPLEQSK Sbjct: 508 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 567 Query: 1918 VATCGWDGMIHYW 1956 VATCGWDG+I YW Sbjct: 568 VATCGWDGLIKYW 580 >ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-like [Cucumis sativus] Length = 580 Score = 898 bits (2320), Expect = 0.0 Identities = 425/553 (76%), Positives = 469/553 (84%), Gaps = 4/553 (0%) Frame = +1 Query: 310 SKTSAPKIDDTTYAL----ANLSENKPIDPSQRVITYNPTYDQLWAPIYGPAHPYAKDGI 477 SKTSAPK+DDT AL AN + +KPIDP+Q ++ +NPTYDQLWAPIYGP+HPYAKDGI Sbjct: 34 SKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGI 93 Query: 478 AQGMRNHKLGFVENAAIEPFLFDEQYNTFHKYGYAADPSAMSGDNMVGDMEKMKENDGIS 657 AQGMRNHKLGFVENA+IEPF+FDEQYNTFHKYGYAADPSA +G+N +GDME +++ND IS Sbjct: 94 AQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAIS 153 Query: 658 VYNISQSXXXXXXXXXXXXXXXGDESGDMDEDFDLEGVDNPATEEWLKKNRKSPWSGKKE 837 VYNI Q E+ DM+E+ + VDNPA++ WL KNRKSPWSGKKE Sbjct: 154 VYNIPQHEQKKRKIEKKKEM---SENEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKE 210 Query: 838 GLVVELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDKSMFHGKEEKDYQGRSWIAAPK 1017 GL ELT DKS FHGKEE+DYQGRSWIA PK Sbjct: 211 GLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTS---DKSTFHGKEERDYQGRSWIAPPK 267 Query: 1018 DAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFPKHGHLLLSAGMDSKVKIWDVFNSGKCM 1197 DAKA N+ CYIPKR +HTWSGHTKGVSAIRFFPKHGHL+LSAGMD+KVKIWDVFNSGKCM Sbjct: 268 DAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCM 327 Query: 1198 RTYMGHGKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDD 1377 RTYMGH +AVRDISF NDG+KFL+AGYDK IKYWDTETGQVIS+FSTGKIPYVVKLNPDD Sbjct: 328 RTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDD 387 Query: 1378 DKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVW 1557 DKQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVW Sbjct: 388 DKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 447 Query: 1558 EFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRDRFQLNKKKRFAGH 1737 EFGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTR+RFQLNKKKRFAGH Sbjct: 448 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 507 Query: 1738 IVAGYACQVNFSPDGQYVMSGDGEGNCWYWNWKTCKVSRKLRCHDGVCIGCEWHPLEQSK 1917 IVAGYACQVNFSPDG++VMSGDGEG CW+W+WKTCKV R L+CH+GVCIGCEWHPLEQSK Sbjct: 508 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 567 Query: 1918 VATCGWDGMIHYW 1956 VATCGWDG+I YW Sbjct: 568 VATCGWDGLIKYW 580 >ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|222852429|gb|EEE89976.1| predicted protein [Populus trichocarpa] Length = 581 Score = 894 bits (2310), Expect = 0.0 Identities = 425/562 (75%), Positives = 470/562 (83%), Gaps = 2/562 (0%) Frame = +1 Query: 280 DSXXXXXXXXSKTSAPKIDDTTYAL--ANLSENKPIDPSQRVITYNPTYDQLWAPIYGPA 453 DS SK++APK+DDT AL AN + +KPIDP Q + +NPTYDQLWAP+ GPA Sbjct: 25 DSSSPPRLLPSKSAAPKVDDTMLALTVANQTLSKPIDPVQHAVAFNPTYDQLWAPVLGPA 84 Query: 454 HPYAKDGIAQGMRNHKLGFVENAAIEPFLFDEQYNTFHKYGYAADPSAMSGDNMVGDMEK 633 HPYAKDGIAQGMRNHKLGFVENAAI+ F+FDEQYNTFHKYGYAADPSA +G+N VGD++ Sbjct: 85 HPYAKDGIAQGMRNHKLGFVENAAIDSFVFDEQYNTFHKYGYAADPSASAGNNYVGDLDT 144 Query: 634 MKENDGISVYNISQSXXXXXXXXXXXXXXXGDESGDMDEDFDLEGVDNPATEEWLKKNRK 813 +++ +GISVYNI Q +E GD D+ D E V+NPAT+ WL KNRK Sbjct: 145 LEKTNGISVYNIPQHEQKKRKIEKKREVT--EEEGDGDDVMDKEEVENPATDAWLMKNRK 202 Query: 814 SPWSGKKEGLVVELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIDKSMFHGKEEKDYQG 993 SPW+GKKEGL EL+ V DK+ FHGKEE+DYQG Sbjct: 203 SPWAGKKEGLQTELSEEQQKYAEEHARKKAEKAGGEKGEV---VADKTTFHGKEERDYQG 259 Query: 994 RSWIAAPKDAKAANEKCYIPKRKIHTWSGHTKGVSAIRFFPKHGHLLLSAGMDSKVKIWD 1173 RSW+A PKDAKA+N+ CYIPKR +HTWSGHTKGVSAIRFFPK+GHL+LSAGMD+KVKIWD Sbjct: 260 RSWLAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWD 319 Query: 1174 VFNSGKCMRTYMGHGKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGQVISSFSTGKIPY 1353 VFNSGKCMRTYMGH KAVRDISF NDGTKFL+A YDKNIKYWDTETGQVIS+FSTGKIPY Sbjct: 320 VFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVISTFSTGKIPY 379 Query: 1354 VVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDDNRRFVTSS 1533 VVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVD+NRRFVTSS Sbjct: 380 VVKLNPDDDKQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSS 439 Query: 1534 DDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRDRFQLN 1713 DDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTR+RFQLN Sbjct: 440 DDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLN 499 Query: 1714 KKKRFAGHIVAGYACQVNFSPDGQYVMSGDGEGNCWYWNWKTCKVSRKLRCHDGVCIGCE 1893 KKKRFAGHIVAGYACQVNFSPDG++VMSGDGEG CW+W+WK+CKV R L+CH+GVCIGCE Sbjct: 500 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 559 Query: 1894 WHPLEQSKVATCGWDGMIHYWD 1959 WHPLEQSKVATCGWDG+I YWD Sbjct: 560 WHPLEQSKVATCGWDGLIKYWD 581