BLASTX nr result

ID: Coptis25_contig00000691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000691
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]            580   e-163
ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like is...   576   e-162
ref|XP_003618775.1| Elongation factor 1-alpha [Medicago truncatu...   576   e-162
ref|XP_003524723.1| PREDICTED: elongation factor 1-alpha-like [G...   575   e-162
gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]               574   e-161

>gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]
          Length = 447

 Score =  580 bits (1495), Expect = e-163
 Identities = 283/290 (97%), Positives = 290/290 (100%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST
Sbjct: 147  QMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 206

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVV
Sbjct: 207  NLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVV 266

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAA
Sbjct: 267  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 326

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKE+EKEPKFLKNGD
Sbjct: 327  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKEIEKEPKFLKNGD 386

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 871
            AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDP+G
Sbjct: 387  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436


>ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max]
            gi|356570231|ref|XP_003553293.1| PREDICTED: elongation
            factor 1-alpha-like isoform 2 [Glycine max]
          Length = 447

 Score =  576 bits (1484), Expect = e-162
 Identities = 282/290 (97%), Positives = 287/290 (98%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 147  QMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV
Sbjct: 207  NLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 266

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TFGPTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAA
Sbjct: 267  TFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 326

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKELEKEPKFLKNGD
Sbjct: 327  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGD 386

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 871
            AGMVKM+PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct: 387  AGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436


>ref|XP_003618775.1| Elongation factor 1-alpha [Medicago truncatula]
            gi|355493790|gb|AES74993.1| Elongation factor 1-alpha
            [Medicago truncatula]
          Length = 987

 Score =  576 bits (1484), Expect = e-162
 Identities = 292/362 (80%), Positives = 310/362 (85%), Gaps = 1/362 (0%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 147  QMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+VKPGMVV
Sbjct: 207  NLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIVKPGMVV 266

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TFGPTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAA
Sbjct: 267  TFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 326

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E++TKIDRRSGKE+EKEPKFLKNGD
Sbjct: 327  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGD 386

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGXXXXXXXXXX 901
            AG++KM+PTKPMVVETF+EYPPLGRFAVRDMRQTVAVGVIK+VEKKDPTG          
Sbjct: 387  AGIIKMVPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPTG---------- 436

Query: 902  XXXFISSRGMFVRVTVFDGVSRNNFGYNCCCL-FSLVVRMVDLFYCVENWVLDRRWQELC 1078
                           V    ++ N   +C CL F L       F  ++NWVLDR   + C
Sbjct: 437  -------------AKVTKAAAKKNL-LSCPCLSFLLFQFYFSSFRNLQNWVLDR---QFC 479

Query: 1079 YV 1084
            YV
Sbjct: 480  YV 481



 Score =  570 bits (1468), Expect = e-160
 Identities = 275/290 (94%), Positives = 287/290 (98%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 687  QMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 746

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+VKPGMVV
Sbjct: 747  NLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIVKPGMVV 806

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TFGPTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAA
Sbjct: 807  TFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 866

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E++TKIDRRSGKE+EKEPKFLKNGD
Sbjct: 867  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGD 926

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 871
            AG++KM+PTKPMVVETF+EYPPLGRFAVRDMRQTVAVGVIK+VEKKDPTG
Sbjct: 927  AGIIKMVPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPTG 976


>ref|XP_003524723.1| PREDICTED: elongation factor 1-alpha-like [Glycine max]
          Length = 429

 Score =  575 bits (1483), Expect = e-162
 Identities = 282/290 (97%), Positives = 287/290 (98%)
 Frame = +2

Query: 2   QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
           QMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 129 QMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 188

Query: 182 NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
           NLDWYKGPTLL+ALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV
Sbjct: 189 NLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 248

Query: 362 TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
           TFGPTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSK+DPAKEAA
Sbjct: 249 TFGPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAA 308

Query: 542 NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
           NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKELEKEPKFLKNGD
Sbjct: 309 NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGD 368

Query: 722 AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 871
           AGMVKM+PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct: 369 AGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 418


>gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]
          Length = 967

 Score =  574 bits (1480), Expect = e-161
 Identities = 291/362 (80%), Positives = 307/362 (84%), Gaps = 6/362 (1%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EI+KEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 147  QMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVV
Sbjct: 207  NLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVV 266

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TF PTGLTTEVKSVEMHHE+LLEALPGDNVGFNVKNVAVKDLKRG+VASNSK+DPAK AA
Sbjct: 267  TFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAA 326

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKE+EKEPKFLKNGD
Sbjct: 327  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGD 386

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGXXXXXXXXXX 901
            AGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG          
Sbjct: 387  AGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG---------- 436

Query: 902  XXXFISSRGMFVRVTVFDGVSRNNFG------YNCCCLFSLVVRMVDLFYCVENWVLDRR 1063
                        +  V  G S+++        Y   CL S  V       C  NWVLDRR
Sbjct: 437  --------AKVTKAAVKKGESKDSVSFITIVWYLVACLCSCFV-FSPSERCSRNWVLDRR 487

Query: 1064 WQ 1069
            W+
Sbjct: 488  WR 489



 Score =  565 bits (1457), Expect = e-159
 Identities = 274/290 (94%), Positives = 285/290 (98%)
 Frame = +2

Query: 2    QMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKIAFVPISGFEGDNMIERST 181
            QMICCCNKMDATTPKYSKARY+EI+KEVSSYLKKVGYNPDKI FVPISGFEGDNMIERST
Sbjct: 665  QMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 724

Query: 182  NLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVV 361
            NLDWYKGPTLL+ALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGMVV
Sbjct: 725  NLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVV 784

Query: 362  TFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNVKNVAVKDLKRGFVASNSKEDPAKEAA 541
            TF PTGLTTEVKSVEMHHE+LLEALPGDNVGFNVKNVAVKDLKRG+VASNSK+DPAK AA
Sbjct: 785  TFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAA 844

Query: 542  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKIDRRSGKELEKEPKFLKNGD 721
            NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EILTKIDRRSGKE+EKEPKFLKNGD
Sbjct: 845  NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGD 904

Query: 722  AGMVKMLPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 871
            AGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct: 905  AGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 954


Top