BLASTX nr result

ID: Coptis25_contig00000689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000689
         (2343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331008.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-40
ref|XP_003633146.1| PREDICTED: uncharacterized protein LOC100852...   171   1e-39
ref|XP_002285428.1| PREDICTED: uncharacterized protein LOC100266...   162   4e-37
emb|CAN72752.1| hypothetical protein VITISV_030561 [Vitis vinifera]   162   4e-37
ref|XP_002271365.1| PREDICTED: uncharacterized protein LOC100242...   160   1e-36

>ref|XP_002331008.1| predicted protein [Populus trichocarpa] gi|222872938|gb|EEF10069.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  172 bits (436), Expect = 4e-40
 Identities = 98/151 (64%), Positives = 110/151 (72%), Gaps = 7/151 (4%)
 Frame = -1

Query: 2187 PSRVNMCG-TTRSSSPSVRFXXXXXXXXXXXXXXXXXXDNQIVKKQNNPLSSTPQKRTCM 2011
            P+RVNM G T++SSSPSVR                    +Q+VKKQ+ P      KRTCM
Sbjct: 65   PTRVNMYGHTSQSSSPSVRLNAISPNRSISTVNPSRSHHHQVVKKQSTP------KRTCM 118

Query: 2010 CSPTNHPGSFRCSLHKNMSF----SNSHYSSN--RLNARRSAMTNSLVRIGTVEGDLVRR 1849
            CSPT HPGSFRCSLHK + F    S+S+YSSN  RLNARRSAMTNSLVRIG VEGDLVRR
Sbjct: 119  CSPTTHPGSFRCSLHKGVGFGGSPSSSNYSSNNNRLNARRSAMTNSLVRIGGVEGDLVRR 178

Query: 1848 ALSALIRPSSHHQRRRAAFQPRPSRLSSMSK 1756
            AL++LIRPSSH QRRR+AFQPRPSRLS MSK
Sbjct: 179  ALASLIRPSSHQQRRRSAFQPRPSRLSVMSK 209


>ref|XP_003633146.1| PREDICTED: uncharacterized protein LOC100852953 [Vitis vinifera]
          Length = 201

 Score =  171 bits (432), Expect = 1e-39
 Identities = 95/145 (65%), Positives = 108/145 (74%), Gaps = 2/145 (1%)
 Frame = -1

Query: 2184 SRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXDNQIVKKQNNPLS--STPQKRTCM 2011
            ++VN+ G+   SSPSVRF                    Q+VKK  NPLS  STP KR+CM
Sbjct: 57   TKVNLYGSA-PSSPSVRFSLDRPISPSRSISATPR--TQVVKKHTNPLSAPSTP-KRSCM 112

Query: 2010 CSPTNHPGSFRCSLHKNMSFSNSHYSSNRLNARRSAMTNSLVRIGTVEGDLVRRALSALI 1831
            CSPT HPGSFRCSLHK  +  ++ YSSNRLNARRSAMTNSLVRIGTVEGDLV+RAL+ALI
Sbjct: 113  CSPTTHPGSFRCSLHKGFNNHSAPYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALI 172

Query: 1830 RPSSHHQRRRAAFQPRPSRLSSMSK 1756
            RPSSH QRRR+ FQPRPSRLS+MSK
Sbjct: 173  RPSSHQQRRRSGFQPRPSRLSNMSK 197


>ref|XP_002285428.1| PREDICTED: uncharacterized protein LOC100266438 [Vitis vinifera]
          Length = 207

 Score =  162 bits (410), Expect = 4e-37
 Identities = 97/147 (65%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = -1

Query: 2187 PSRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXDNQIVKKQNNPLSSTPQKRTCMC 2008
            P+RVN+ G+T  +S SVRF                   +QIV+K      STP+KR CMC
Sbjct: 68   PTRVNLYGSTPLAS-SVRFSIDRSISPSRSIAVPRR--DQIVRK------STPKKR-CMC 117

Query: 2007 SPTNHPGSFRCSLHKNMSFSNSH---YSSNRLNARRSAMTNSLVRIGTVEGDLVRRALSA 1837
            SPT HPGSFRCSLHKN + ++SH   YSSNRLNARRSAMTNSLVRIGTVEGDLV+RAL+A
Sbjct: 118  SPTTHPGSFRCSLHKNFN-NSSHTISYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 176

Query: 1836 LIRPSSHHQRRRAAFQPRPSRLSSMSK 1756
            LIRPSSH QRRRAAFQPRPSRLS MSK
Sbjct: 177  LIRPSSHQQRRRAAFQPRPSRLSIMSK 203


>emb|CAN72752.1| hypothetical protein VITISV_030561 [Vitis vinifera]
          Length = 269

 Score =  162 bits (410), Expect = 4e-37
 Identities = 97/147 (65%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = -1

Query: 2187 PSRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXDNQIVKKQNNPLSSTPQKRTCMC 2008
            P+RVN+ G+T  +S SVRF                   +QIV+K      STP+KR CMC
Sbjct: 68   PTRVNLYGSTPLAS-SVRFSIDRSISPSRSIAVPRR--DQIVRK------STPKKR-CMC 117

Query: 2007 SPTNHPGSFRCSLHKNMSFSNSH---YSSNRLNARRSAMTNSLVRIGTVEGDLVRRALSA 1837
            SPT HPGSFRCSLHKN + ++SH   YSSNRLNARRSAMTNSLVRIGTVEGDLV+RAL+A
Sbjct: 118  SPTTHPGSFRCSLHKNFN-NSSHTISYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 176

Query: 1836 LIRPSSHHQRRRAAFQPRPSRLSSMSK 1756
            LIRPSSH QRRRAAFQPRPSRLS MSK
Sbjct: 177  LIRPSSHQQRRRAAFQPRPSRLSIMSK 203


>ref|XP_002271365.1| PREDICTED: uncharacterized protein LOC100242170 [Vitis vinifera]
          Length = 203

 Score =  160 bits (405), Expect = 1e-36
 Identities = 93/149 (62%), Positives = 104/149 (69%), Gaps = 6/149 (4%)
 Frame = -1

Query: 2187 PSRVNMC-GTTRSSSPSVRFXXXXXXXXXXXXXXXXXXDNQIVKKQNNPLSSTPQKRTCM 2011
            P+RVN+  G + S SPSVRF                   +Q+V+KQN    S+ QKRTC+
Sbjct: 52   PTRVNLYRGVSSSPSPSVRFSIEPQTSPRRSISVSPR--DQVVRKQNT--GSSRQKRTCL 107

Query: 2010 CSPTNHPGSFRCSLHKNM-----SFSNSHYSSNRLNARRSAMTNSLVRIGTVEGDLVRRA 1846
            CSPT HPGSFRCS+HKN      S S   Y SNRLNARRSAMTNSLVRIG VEGDLV+RA
Sbjct: 108  CSPTTHPGSFRCSMHKNANTGAGSGSGGAYQSNRLNARRSAMTNSLVRIGGVEGDLVKRA 167

Query: 1845 LSALIRPSSHHQRRRAAFQPRPSRLSSMS 1759
            LSALIRPSSH QRRRAAF+PR SRLS MS
Sbjct: 168  LSALIRPSSHQQRRRAAFEPRLSRLSIMS 196


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