BLASTX nr result

ID: Coptis25_contig00000661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000661
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633603.1| PREDICTED: LOW QUALITY PROTEIN: germin-like ...   108   6e-22
emb|CAN74480.1| hypothetical protein VITISV_042844 [Vitis vinifera]   107   1e-21
gb|AAM76226.1| putative germin E protein precursor [Gossypium ra...   106   2e-21
gb|AAM76225.1| putative germin E protein precursor [Gossypium he...   106   2e-21
gb|AAM76227.1| putative germin E protein precursor [Gossypium hi...   106   2e-21

>ref|XP_003633603.1| PREDICTED: LOW QUALITY PROTEIN: germin-like protein subfamily 1
           member 13-like [Vitis vinifera]
          Length = 220

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = -2

Query: 178 LVVLEGTLYVGFVTSNPDNRLITKVLYQGDVFVFPVGLIHFQFNIGKTKAVAFAGLSSQ 2
           L VLEGTLYVGFVTSNP+NRLI+KVLY+GDVFVFP+GLIHFQFN+GKT AVA AGLSSQ
Sbjct: 121 LTVLEGTLYVGFVTSNPENRLISKVLYKGDVFVFPIGLIHFQFNVGKTNAVAIAGLSSQ 179


>emb|CAN74480.1| hypothetical protein VITISV_042844 [Vitis vinifera]
          Length = 192

 Score =  107 bits (267), Expect(2) = 1e-21
 Identities = 52/59 (88%), Positives = 57/59 (96%)
 Frame = -2

Query: 178 LVVLEGTLYVGFVTSNPDNRLITKVLYQGDVFVFPVGLIHFQFNIGKTKAVAFAGLSSQ 2
           LVVLEGTL VGFVTSN +NRLI+KVLY+GDVFVFP+GLIHFQFN+GKTKAVAFAGLSSQ
Sbjct: 88  LVVLEGTLLVGFVTSNNENRLISKVLYKGDVFVFPIGLIHFQFNVGKTKAVAFAGLSSQ 146



 Score = 20.8 bits (42), Expect(2) = 1e-21
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 198 HPRATEIL 175
           HPRATEIL
Sbjct: 81  HPRATEIL 88


>gb|AAM76226.1| putative germin E protein precursor [Gossypium raimondii]
           gi|29836441|gb|AAM76228.1| putative germin E protein
           precursor [Gossypium hirsutum]
          Length = 187

 Score =  106 bits (264), Expect(2) = 2e-21
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -2

Query: 178 LVVLEGTLYVGFVTSNPDNRLITKVLYQGDVFVFPVGLIHFQFNIGKTKAVAFAGLSSQ 2
           LVV +GTLYVGFVTSNPDNRL TKVL  GDVFVFPVGLIHFQFNIGKT A+AFAGLSSQ
Sbjct: 95  LVVTKGTLYVGFVTSNPDNRLFTKVLKTGDVFVFPVGLIHFQFNIGKTNAIAFAGLSSQ 153



 Score = 20.8 bits (42), Expect(2) = 2e-21
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 198 HPRATEIL 175
           HPRATEIL
Sbjct: 88  HPRATEIL 95


>gb|AAM76225.1| putative germin E protein precursor [Gossypium herbaceum]
          Length = 187

 Score =  106 bits (264), Expect(2) = 2e-21
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -2

Query: 178 LVVLEGTLYVGFVTSNPDNRLITKVLYQGDVFVFPVGLIHFQFNIGKTKAVAFAGLSSQ 2
           LVV +GTLYVGFVTSNPDNRL TKVL  GDVFVFPVGLIHFQFNIGKT A+AFAGLSSQ
Sbjct: 95  LVVTKGTLYVGFVTSNPDNRLFTKVLKTGDVFVFPVGLIHFQFNIGKTNAIAFAGLSSQ 153



 Score = 20.8 bits (42), Expect(2) = 2e-21
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 198 HPRATEIL 175
           HPRATEIL
Sbjct: 88  HPRATEIL 95


>gb|AAM76227.1| putative germin E protein precursor [Gossypium hirsutum]
          Length = 187

 Score =  106 bits (264), Expect(2) = 2e-21
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -2

Query: 178 LVVLEGTLYVGFVTSNPDNRLITKVLYQGDVFVFPVGLIHFQFNIGKTKAVAFAGLSSQ 2
           LVV +GTLYVGFVTSNPDNRL TKVL  GDVFVFPVGLIHFQFNIGKT A+AFAGLSSQ
Sbjct: 95  LVVTKGTLYVGFVTSNPDNRLFTKVLKTGDVFVFPVGLIHFQFNIGKTNAIAFAGLSSQ 153



 Score = 20.8 bits (42), Expect(2) = 2e-21
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 198 HPRATEIL 175
           HPRATEIL
Sbjct: 88  HPRATEIL 95


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