BLASTX nr result

ID: Coptis25_contig00000656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000656
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET97562.1| elongation factor [Ziziphus jujuba]                    385   e-104
ref|XP_002523907.1| eukaryotic translation elongation factor, pu...   385   e-104
dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]                383   e-104
ref|XP_002266780.1| PREDICTED: elongation factor 2-like isoform ...   383   e-104
gb|AFK64817.1| translation elongation factor 2 [Prunus persica]       380   e-103

>gb|AET97562.1| elongation factor [Ziziphus jujuba]
          Length = 843

 Score =  385 bits (989), Expect = e-104
 Identities = 184/192 (95%), Positives = 188/192 (97%)
 Frame = +3

Query: 3   RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVMVYPEKGTV 182
           RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDV VYPEKGTV
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTV 209

Query: 183 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 362
           AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR
Sbjct: 210 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 269

Query: 363 GFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLGKALMKRVMQTWLPAS 542
           GFVQFCYEPIKQIINTCMNDQKDKLWPML+KLG TMKS+EK+L+GKALMKRVMQTWLPAS
Sbjct: 270 GFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGCTMKSEEKDLMGKALMKRVMQTWLPAS 329

Query: 543 TALLEMMIHHLP 578
            ALLEMMI HLP
Sbjct: 330 NALLEMMIFHLP 341



 Score =  337 bits (865), Expect = 3e-90
 Identities = 167/178 (93%), Positives = 174/178 (97%)
 Frame = +1

Query: 706  KVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATL 885
            KVRIMGPNYVPG+KKDLY KSVQRTVIWMGK+QE+VEDVPCGNTVA+VGLDQFITKNATL
Sbjct: 408  KVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATL 467

Query: 886  TNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 1065
            TNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE
Sbjct: 468  TNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 527

Query: 1066 HIIAGAGELHLEICLKDLVDDFMGGAEIIKSDPVVSFRETVLEKSVRTVMSKSPNKHN 1239
            HI+AGAGE HLEICLKDL +DFMGGAEIIKSDPVVSFRETVLEKS RTVMSKSPNKHN
Sbjct: 528  HIVAGAGEPHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHN 585


>ref|XP_002523907.1| eukaryotic translation elongation factor, putative [Ricinus
           communis] gi|223536837|gb|EEF38476.1| eukaryotic
           translation elongation factor, putative [Ricinus
           communis]
          Length = 843

 Score =  385 bits (988), Expect = e-104
 Identities = 184/192 (95%), Positives = 188/192 (97%)
 Frame = +3

Query: 3   RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVMVYPEKGTV 182
           RIRPVLTVNKMDRCFLELQVDGEEAYQTF RVIENANVIMATYEDPLLGD  VYPEKGTV
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDCQVYPEKGTV 209

Query: 183 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 362
           AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWT+KNTGSPTCKR
Sbjct: 210 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKR 269

Query: 363 GFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLGKALMKRVMQTWLPAS 542
           GFVQFCYEPIKQIINTCMNDQKDKLWPML+KLGVTMKSDEKEL+GKALMKRVMQTWLPAS
Sbjct: 270 GFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKELMGKALMKRVMQTWLPAS 329

Query: 543 TALLEMMIHHLP 578
           +ALLEMMI HLP
Sbjct: 330 SALLEMMIFHLP 341



 Score =  342 bits (877), Expect = 1e-91
 Identities = 171/178 (96%), Positives = 174/178 (97%)
 Frame = +1

Query: 706  KVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATL 885
            KVRIMGPNYVPG+KKDLY KSVQRTVIWMGKKQE+VEDVPCGNTVALVGLDQFITKNATL
Sbjct: 408  KVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATL 467

Query: 886  TNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 1065
            TNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE
Sbjct: 468  TNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 527

Query: 1066 HIIAGAGELHLEICLKDLVDDFMGGAEIIKSDPVVSFRETVLEKSVRTVMSKSPNKHN 1239
            HIIAGAGELHLEICLKDL DDFMGGAEIIKSDPVVSFRETVLEKS R VMSKSPNKHN
Sbjct: 528  HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRVVMSKSPNKHN 585


>dbj|BAB86847.1| elongation factor EF-2 [Pisum sativum]
          Length = 493

 Score =  383 bits (984), Expect = e-104
 Identities = 184/192 (95%), Positives = 187/192 (97%)
 Frame = +3

Query: 3   RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVMVYPEKGTV 182
           RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDV VYPEKGTV
Sbjct: 83  RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTV 142

Query: 183 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 362
           AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGS +CKR
Sbjct: 143 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSASCKR 202

Query: 363 GFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLGKALMKRVMQTWLPAS 542
           GFVQFCYEPIKQIINTCMNDQKDKLWPML KLGVTMKSDEK+L+GK LMKRVMQTWLPAS
Sbjct: 203 GFVQFCYEPIKQIINTCMNDQKDKLWPMLTKLGVTMKSDEKDLMGKPLMKRVMQTWLPAS 262

Query: 543 TALLEMMIHHLP 578
           TALLEMMI HLP
Sbjct: 263 TALLEMMIFHLP 274



 Score =  297 bits (760), Expect = 4e-78
 Identities = 146/153 (95%), Positives = 151/153 (98%)
 Frame = +1

Query: 706  KVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATL 885
            KVRIMGPNYVPG+KKDLY KSVQRTVIWMGK+QE+VEDVPCGNTVALVGLDQFITKNATL
Sbjct: 341  KVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVALVGLDQFITKNATL 400

Query: 886  TNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 1065
            TNEKEV+AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE
Sbjct: 401  TNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 460

Query: 1066 HIIAGAGELHLEICLKDLVDDFMGGAEIIKSDP 1164
            HIIAGAGELHLEICLKDL DDFMGGAEI+KSDP
Sbjct: 461  HIIAGAGELHLEICLKDLQDDFMGGAEIVKSDP 493


>ref|XP_002266780.1| PREDICTED: elongation factor 2-like isoform 1 [Vitis vinifera]
           gi|359494453|ref|XP_003634783.1| PREDICTED: elongation
           factor 2-like isoform 2 [Vitis vinifera]
          Length = 843

 Score =  383 bits (984), Expect = e-104
 Identities = 182/192 (94%), Positives = 188/192 (97%)
 Frame = +3

Query: 3   RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVMVYPEKGTV 182
           RIRPVLTVNKMDRCFLELQVDGEEAYQTF RVIENANVIMATYEDPLLGDV VYPEKGTV
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTV 209

Query: 183 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 362
           AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDP+T+KWTTKNTG+P CKR
Sbjct: 210 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPSTRKWTTKNTGAPNCKR 269

Query: 363 GFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLGKALMKRVMQTWLPAS 542
           GFVQFCYEPIKQIINTCMNDQKDKLWPML+KLGVTMKSDEK+L+GKALMKRVMQTWLPAS
Sbjct: 270 GFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKDLMGKALMKRVMQTWLPAS 329

Query: 543 TALLEMMIHHLP 578
           TALLEMMI HLP
Sbjct: 330 TALLEMMIFHLP 341



 Score =  338 bits (866), Expect = 2e-90
 Identities = 167/178 (93%), Positives = 174/178 (97%)
 Frame = +1

Query: 706  KVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATL 885
            KVRIMGPNYVPG+KKDLY KSVQRTVIWMGK+QE+VEDVPCGNTVA+VGLDQFITKNATL
Sbjct: 408  KVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATL 467

Query: 886  TNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 1065
            TNEKE +AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC+IEESGE
Sbjct: 468  TNEKESDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGE 527

Query: 1066 HIIAGAGELHLEICLKDLVDDFMGGAEIIKSDPVVSFRETVLEKSVRTVMSKSPNKHN 1239
            HIIAGAGELHLEICLKDL DDFMGGAEI+KSDPVVSFRETVLEKS RTVMSKSPNKHN
Sbjct: 528  HIIAGAGELHLEICLKDLQDDFMGGAEIVKSDPVVSFRETVLEKSCRTVMSKSPNKHN 585


>gb|AFK64817.1| translation elongation factor 2 [Prunus persica]
          Length = 843

 Score =  380 bits (977), Expect = e-103
 Identities = 182/192 (94%), Positives = 187/192 (97%)
 Frame = +3

Query: 3   RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVMVYPEKGTV 182
           RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDV VYPEKGTV
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTV 209

Query: 183 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKR 362
           AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGEN+FDPATKKWT+KNTGS TCKR
Sbjct: 210 AFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENYFDPATKKWTSKNTGSATCKR 269

Query: 363 GFVQFCYEPIKQIINTCMNDQKDKLWPMLKKLGVTMKSDEKELLGKALMKRVMQTWLPAS 542
           GFVQFCYEPIKQIINTCMNDQK+KLWPML KLGVTMKSDEKEL+GK LMKRVMQTWLPAS
Sbjct: 270 GFVQFCYEPIKQIINTCMNDQKEKLWPMLTKLGVTMKSDEKELMGKGLMKRVMQTWLPAS 329

Query: 543 TALLEMMIHHLP 578
           +ALLEMMI HLP
Sbjct: 330 SALLEMMIFHLP 341



 Score =  339 bits (870), Expect = 8e-91
 Identities = 169/178 (94%), Positives = 174/178 (97%)
 Frame = +1

Query: 706  KVRIMGPNYVPGQKKDLYTKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATL 885
            KVRIMGPNYVPG+KKDLY K+VQRTVIWMGKKQE+VEDVPCGNTVALVGLDQFITKNATL
Sbjct: 408  KVRIMGPNYVPGEKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATL 467

Query: 886  TNEKEVEAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGE 1065
            TNEKE +AHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC+IEESGE
Sbjct: 468  TNEKEADAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGE 527

Query: 1066 HIIAGAGELHLEICLKDLVDDFMGGAEIIKSDPVVSFRETVLEKSVRTVMSKSPNKHN 1239
            HIIAGAGELHLEICLKDL DDFMGGAEIIKSDPVVSFRETVLEKS RTVMSKSPNKHN
Sbjct: 528  HIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSSRTVMSKSPNKHN 585


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