BLASTX nr result

ID: Coptis25_contig00000655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000655
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC06383.1| elongation factor 1 alpha, partial [Malus x domes...   104   2e-20
gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]            104   2e-20
dbj|BAH36864.1| elongation factor1-alpha [Rosa hybrid cultivar]       104   2e-20
gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]             103   4e-20
gb|ABR13275.1| putative elongation factor-1 alpha 3 [Prunus dulcis]   103   4e-20

>gb|AAC06383.1| elongation factor 1 alpha, partial [Malus x domestica]
          Length = 143

 Score =  104 bits (260), Expect = 2e-20
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 717 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 571
           DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID
Sbjct: 16  DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 64


>gb|AEQ75495.1| elongation factor 1-alpha [Rosa multiflora]
          Length = 447

 Score =  104 bits (260), Expect = 2e-20
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 717 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 571
           DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID
Sbjct: 320 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 368


>dbj|BAH36864.1| elongation factor1-alpha [Rosa hybrid cultivar]
          Length = 328

 Score =  104 bits (260), Expect = 2e-20
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 717 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 571
           DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID
Sbjct: 264 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 312


>gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]
          Length = 447

 Score =  103 bits (257), Expect = 4e-20
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -3

Query: 717 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 571
           DPA+EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID
Sbjct: 320 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 368


>gb|ABR13275.1| putative elongation factor-1 alpha 3 [Prunus dulcis]
          Length = 164

 Score =  103 bits (257), Expect = 4e-20
 Identities = 48/49 (97%), Positives = 49/49 (100%)
 Frame = -3

Query: 717 DPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 571
           DPA+EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID
Sbjct: 79  DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGEILTKID 127


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