BLASTX nr result

ID: Coptis25_contig00000646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000646
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCA...   360   4e-97
emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]   360   6e-97
ref|XP_002519826.1| ESC, putative [Ricinus communis] gi|22354087...   322   1e-85
ref|XP_003552472.1| PREDICTED: putative DNA-binding protein ESCA...   317   5e-84
ref|XP_002326520.1| predicted protein [Populus trichocarpa] gi|2...   317   5e-84

>ref|XP_002281411.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 282

 Score =  360 bits (925), Expect = 4e-97
 Identities = 203/290 (70%), Positives = 216/290 (74%), Gaps = 6/290 (2%)
 Frame = +1

Query: 265  MAGLDLGTASHYVHQLHHRSDLHLQRQQQVESDEDNNNNHRG-QFSGD-QDDNNHHGLDL 438
            MAGLDLGTAS Y+HQLH RSDLHLQR Q  +SDEDNN N  G Q+SGD QDD  HHGL+L
Sbjct: 1    MAGLDLGTASRYIHQLH-RSDLHLQRPQ--DSDEDNNTNRGGAQYSGDHQDDVAHHGLEL 57

Query: 439  VGGSSG--DIVXXXXXXXXXXXXXXXXXXVIITRESANTLRAHILEVGNGCDVFDSVATY 612
            V  ++G  DIV                  VIITRESANTLRAHILEVGNGCDVFD VATY
Sbjct: 58   VSANAGPGDIVARRPRGRPPGSKNRPKPPVIITRESANTLRAHILEVGNGCDVFDCVATY 117

Query: 613  ARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLT 792
            ARRRQRGIC+LSGSGTVTNVS+RQPAAAGAI+TLHGRFEILSLSGSFLPPPAPPGATSLT
Sbjct: 118  ARRRQRGICVLSGSGTVTNVSIRQPAAAGAILTLHGRFEILSLSGSFLPPPAPPGATSLT 177

Query: 793  IFLAXXXXXXXXXXXXXALIASGPVIVIAASFTNVAYERLPLDEEEPLQMQQXXXXXXXX 972
            IFLA              L A+GPVIVIAASFTNVAYERLPLDEEEPLQMQQ        
Sbjct: 178  IFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEEPLQMQQ-----QVP 232

Query: 973  XXXXXXXXXINNPFPDPSSALPFFNLPLNNMP--QLPIDGWAGNNSAGRP 1116
                     INNPFPDPS+ LPFFNLPL NMP  QLP+DGWAGN+ A  P
Sbjct: 233  QSSGGGGGGINNPFPDPSAGLPFFNLPL-NMPNCQLPVDGWAGNSGARPP 281


>emb|CAN83987.1| hypothetical protein VITISV_032602 [Vitis vinifera]
          Length = 282

 Score =  360 bits (923), Expect = 6e-97
 Identities = 202/290 (69%), Positives = 216/290 (74%), Gaps = 6/290 (2%)
 Frame = +1

Query: 265  MAGLDLGTASHYVHQLHHRSDLHLQRQQQVESDEDNNNNHRG-QFSGD-QDDNNHHGLDL 438
            MAGLDLGTAS Y+HQLH RSDLHLQR Q  +SDEDNN N  G Q+SGD QDD  HHGL+L
Sbjct: 1    MAGLDLGTASRYIHQLH-RSDLHLQRPQ--DSDEDNNTNRGGAQYSGDHQDDVAHHGLEL 57

Query: 439  VGGSSG--DIVXXXXXXXXXXXXXXXXXXVIITRESANTLRAHILEVGNGCDVFDSVATY 612
            V  ++G  D+V                  VIITRESANTLRAHILEVGNGCDVFD VATY
Sbjct: 58   VSANAGPGDLVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATY 117

Query: 613  ARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLT 792
            ARRRQRGIC+LSGSGTVTNVS+RQPAAAGAI+TLHGRFEILSLSGSFLPPPAPPGATSLT
Sbjct: 118  ARRRQRGICVLSGSGTVTNVSIRQPAAAGAILTLHGRFEILSLSGSFLPPPAPPGATSLT 177

Query: 793  IFLAXXXXXXXXXXXXXALIASGPVIVIAASFTNVAYERLPLDEEEPLQMQQXXXXXXXX 972
            IFLA              L A+GPVIVIAASFTNVAYERLPLDEEEPLQMQQ        
Sbjct: 178  IFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEEEPLQMQQ-----QVP 232

Query: 973  XXXXXXXXXINNPFPDPSSALPFFNLPLNNMP--QLPIDGWAGNNSAGRP 1116
                     INNPFPDPS+ LPFFNLPL NMP  QLP+DGWAGN+ A  P
Sbjct: 233  QSSGGGGGGINNPFPDPSAGLPFFNLPL-NMPNCQLPVDGWAGNSGARPP 281


>ref|XP_002519826.1| ESC, putative [Ricinus communis] gi|223540872|gb|EEF42430.1| ESC,
            putative [Ricinus communis]
          Length = 289

 Score =  322 bits (825), Expect = 1e-85
 Identities = 186/295 (63%), Positives = 201/295 (68%), Gaps = 12/295 (4%)
 Frame = +1

Query: 265  MAGLDLGTASHYVHQLHHRSDLHLQRQQQVESDEDNNNNHRGQFSGDQ----DDNNHHGL 432
            MAGLDLGT + YVHQLHHR DLHLQRQ + E D D+N    G FS D     +D +  GL
Sbjct: 1    MAGLDLGT-TRYVHQLHHRPDLHLQRQLESE-DHDSNRPGGGHFSTDHHQQHEDGSQQGL 58

Query: 433  DLVGGS--SGDIVXXXXXXXXXXXXXXXXXXVIITRESANTLRAHILEVGNGCDVFDSVA 606
            DLV  +  SGDIV                  VIITRESANTLRAHILEVGNGCDVF+ ++
Sbjct: 59   DLVAAATNSGDIVARRPRGRPPGSRNKPKPPVIITRESANTLRAHILEVGNGCDVFECIS 118

Query: 607  TYARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATS 786
             YARRRQRGICILSG+GTVTNVS+RQPAAAGA+VTLHGRFEILSLSGSFLPPPAPPGATS
Sbjct: 119  NYARRRQRGICILSGAGTVTNVSIRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATS 178

Query: 787  LTIFLAXXXXXXXXXXXXXALIASGPVIVIAASFTNVAYERLPLDEEEPLQMQQXXXXXX 966
            LTIFLA              L A+GPVIVIAASFTNVAYERLPLDE+E LQMQ       
Sbjct: 179  LTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEDEQLQMQSGSSGGG 238

Query: 967  XXXXXXXXXXXINNPFPD---PSSALPFFNLPLNNMP---QLPIDGWAGNNSAGR 1113
                        NNPFPD    S  LPFFNLPL  MP   QLP+DGWAG NS  R
Sbjct: 239  GGSGVG------NNPFPDGAATSGGLPFFNLPL-TMPSNVQLPVDGWAGTNSGSR 286


>ref|XP_003552472.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 268

 Score =  317 bits (812), Expect = 5e-84
 Identities = 179/285 (62%), Positives = 196/285 (68%), Gaps = 2/285 (0%)
 Frame = +1

Query: 265  MAGLDLGTASHYVHQLHHRSDLHLQRQQQVESDEDNNNNHRGQFSGDQDDNNHHGLDLVG 444
            MAG+DLG+ASH+VH    R DL     QQ   D+DNN N            NH GLDLV 
Sbjct: 1    MAGIDLGSASHFVHHRLERPDLEDDENQQ---DQDNNLN------------NHEGLDLVT 45

Query: 445  GSSG--DIVXXXXXXXXXXXXXXXXXXVIITRESANTLRAHILEVGNGCDVFDSVATYAR 618
             +SG  D+V                  VIITRESANTLRAHILEV +GCDVF+SVATYAR
Sbjct: 46   PNSGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFESVATYAR 105

Query: 619  RRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIF 798
            +RQRGIC+LSGSGTVTNV+LRQPAAAGA+VTLHGRFEILSLSGSFLPPPAPPGATSLT+F
Sbjct: 106  KRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVF 165

Query: 799  LAXXXXXXXXXXXXXALIASGPVIVIAASFTNVAYERLPLDEEEPLQMQQXXXXXXXXXX 978
            L               L+ASGPVIVIA+SFTNVAYERLPLDEEE +QMQQ          
Sbjct: 166  LGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEESMQMQQGQSSAGGGGS 225

Query: 979  XXXXXXXINNPFPDPSSALPFFNLPLNNMPQLPIDGWAGNNSAGR 1113
                    NN FPDPSS LPFFNLPL NMPQLP+DGWAG NS GR
Sbjct: 226  GGGVS---NNSFPDPSSGLPFFNLPL-NMPQLPVDGWAG-NSGGR 265


>ref|XP_002326520.1| predicted protein [Populus trichocarpa] gi|222833842|gb|EEE72319.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  317 bits (812), Expect = 5e-84
 Identities = 183/300 (61%), Positives = 197/300 (65%), Gaps = 17/300 (5%)
 Frame = +1

Query: 265  MAGLDLGTASHYVHQLHHRSDLHLQRQQQVESDEDNN------NNHRGQFSGDQ--DDNN 420
            MAGLDLGT S YVHQLHHR DLHLQ Q   E  + N           G FS D   DD +
Sbjct: 1    MAGLDLGTTSRYVHQLHHRPDLHLQHQPDPEDHDSNRAGGGLGGGSGGHFSTDHHHDDGS 60

Query: 421  HHGLDLVGGSS----GDIVXXXXXXXXXXXXXXXXXXVIITRESANTLRAHILEVGNGCD 588
            H GLDLV  ++    GD+V                  VIITRESANTLRAHILEVGNGCD
Sbjct: 61   HQGLDLVAAAANSGQGDLVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGNGCD 120

Query: 589  VFDSVATYARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPA 768
            VF+ VA YARRRQRGICILSG+GTVTNVS+RQPAAAGAIVTLHGRFEILSLSGSFLPPPA
Sbjct: 121  VFECVANYARRRQRGICILSGAGTVTNVSIRQPAAAGAIVTLHGRFEILSLSGSFLPPPA 180

Query: 769  PPGATSLTIFLAXXXXXXXXXXXXXALIASGPVIVIAASFTNVAYERLPLDEEEPLQMQQ 948
            PPGATSLTIFLA              L A+GPVIVIAASFTNVAYERLPLDE++ LQMQ 
Sbjct: 181  PPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEDDQLQMQS 240

Query: 949  XXXXXXXXXXXXXXXXXINNPFPD---PSSALPFFNLPLNNMP--QLPIDGWAGNNSAGR 1113
                              N+PF +   PS  LPFFNLPLN     QLP+DGW G NS GR
Sbjct: 241  GGGGGGGGGAGGGGVG--NSPFNESGTPSGGLPFFNLPLNMTANVQLPVDGW-GGNSGGR 297


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