BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000642
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   115   4e-24
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   110   1e-22
ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004133957.1| PREDICTED: NAD-dependent malic enzyme 1, mit...   102   4e-20

>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/99 (59%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
 Frame = -2

Query: 289 MSNFSHQLRFTSSSVVKRIKHQIMSTF---ERKSFTTTEGSRPTIVHKRNIDILHDPWFN 119
           MSNFS+Q+R  S+S++KR+K ++ +     + +SFTTTEG RPTIVHKR++DILHDPWFN
Sbjct: 1   MSNFSNQIR-ASASLIKRLKDRLANPALLNQSRSFTTTEGHRPTIVHKRSLDILHDPWFN 59

Query: 118 KGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLKR 2
           KGTAFSMTE             +MSS+QQIERFM DLKR
Sbjct: 60  KGTAFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLKR 98


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = -2

Query: 289 MSNFSHQLRFTSSSVVKRIKHQIMSTF--ERKSFTTTEGSRPTIVHKRNIDILHDPWFNK 116
           MSNF  Q++  SS +++R+KH+  ++    R+SFTTTEG RP++VHKR++DILHDPWFNK
Sbjct: 1   MSNFCRQIKLPSS-LIRRLKHRSSNSMLSGRRSFTTTEGHRPSLVHKRSLDILHDPWFNK 59

Query: 115 GTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLKR 2
           GTAFSMTE             VMS + QIERFMVDLKR
Sbjct: 60  GTAFSMTERDRLDLRGLLPPTVMSPEMQIERFMVDLKR 97


>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/100 (58%), Positives = 72/100 (72%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 MSNFSHQLRFTSSSVVKRIKHQIMSTFE----RKSFTTTEGSRPTIVHKRNIDILHDPWF 122
           M NFS+Q+R  SSS++KR++ ++ +        +SFTT EG RPTIVHKR++DILHDPWF
Sbjct: 1   MPNFSNQIR-ASSSLIKRLQQRMTNPAALMQATRSFTTLEGHRPTIVHKRSLDILHDPWF 59

Query: 121 NKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLKR 2
           NKGTAFSMTE             VMSS+QQI+RFMVDLKR
Sbjct: 60  NKGTAFSMTERDRLDIRGLLPPNVMSSEQQIQRFMVDLKR 99


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 MSNFSHQLRFTSSSVVKRIKHQIMSTFE----RKSFTTTEGSRPTIVHKRNIDILHDPWF 122
           MSNFS+Q+R  SSS++KR+K ++ +        + FTT EG RPTIVHKR++DILHDPWF
Sbjct: 1   MSNFSNQIR-ASSSLIKRLKQRMTNPAALMQATRHFTTLEGHRPTIVHKRSLDILHDPWF 59

Query: 121 NKGTAFSMTEXXXXXXXXXXXXGVMSSQQQIERFMVDLKR 2
           NKGTAFSMTE             VM+S+QQI+RF  DLKR
Sbjct: 60  NKGTAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLKR 99


>ref|XP_004133957.1| PREDICTED: NAD-dependent malic enzyme 1, mitochondrial-like
           [Cucumis sativus]
          Length = 626

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 6/91 (6%)
 Frame = -2

Query: 256 SSSVVKRIK------HQIMSTFERKSFTTTEGSRPTIVHKRNIDILHDPWFNKGTAFSMT 95
           S+S++KR+K      + I +  + +SFTT+EG RPTIVHKR++DILHDPWFNKGTAF++T
Sbjct: 8   SASLMKRLKLHYQMINSIPALAQARSFTTSEGHRPTIVHKRSLDILHDPWFNKGTAFTIT 67

Query: 94  EXXXXXXXXXXXXGVMSSQQQIERFMVDLKR 2
           E             VMSS+QQIERFMVDLKR
Sbjct: 68  ERDRLDLRGLLPPNVMSSEQQIERFMVDLKR 98