BLASTX nr result

ID: Coptis25_contig00000614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000614
         (1912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   936   0.0  
ref|XP_003520388.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   925   0.0  
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   925   0.0  
ref|XP_003626824.1| Pentatricopeptide repeat-containing protein ...   924   0.0  
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   924   0.0  

>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
            predicted protein [Populus trichocarpa]
          Length = 627

 Score =  936 bits (2419), Expect = 0.0
 Identities = 468/535 (87%), Positives = 494/535 (92%)
 Frame = -1

Query: 1912 FMVDLKRLEVHARDGPADPNALAKWRILNRLHDRNETMYYKVLIEKIEEYAPIVYTPTVG 1733
            FMVDLKRLEV ARDGP+DPNALAKWRILNRLHDRNETMY+KVLI  IEEYAPIVYTPTVG
Sbjct: 93   FMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYFKVLIANIEEYAPIVYTPTVG 152

Query: 1732 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVQGI 1553
            L CQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPA+QVDMIVVTDGSRILGLGDLGVQGI
Sbjct: 153  LACQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 212

Query: 1552 GIAIGKLDLYVAAAGLNPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYISVIDE 1373
            GIAIGKLDLYVAAAG+NPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRL+G+EYI+VIDE
Sbjct: 213  GIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLDGDEYIAVIDE 272

Query: 1372 FMEAVFTRWPHVIVQFEDFQSKWAFNLLQRYRNKYRMFNDDVQXXXXXXXXXXXXXVRAQ 1193
            FMEAVFTRWPHVIVQFEDFQSKWAF LLQRYRN YRMFNDDVQ             VRAQ
Sbjct: 273  FMEAVFTRWPHVIVQFEDFQSKWAFKLLQRYRNAYRMFNDDVQGTAGVAIAGLLGAVRAQ 332

Query: 1192 GKPMIDFPKQKIVLAGAGSAGIGVANAARKTMARMLGNNESAFESARSQFWVVDANGLIT 1013
            G+PMIDFPKQKIV+AGAGSAGIGV NAARKTMARMLGNNESAFESA  QFWVVDA GLIT
Sbjct: 333  GRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNESAFESAGRQFWVVDAKGLIT 392

Query: 1012 EGRKNIDPQALPFARTMKEVGHQGLREGASLEEVVRQVKPDVLLGLSAVGGLFSNEVLEA 833
            E R+NID +ALPFAR ++E   QGLREGASL EVVR+VKPDVLLGLSAVGGLFS EVLEA
Sbjct: 393  EERENIDLEALPFARKVEEASRQGLREGASLAEVVREVKPDVLLGLSAVGGLFSKEVLEA 452

Query: 832  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSVLGDQLIFASGSPFNNVDLGNGLTGHCNQG 653
            LKGSTSTRPAIFAMSNPTKNAECTPEEAFS++GD +IFASGSPF +VDLGNG  GHCNQG
Sbjct: 453  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSIVGDNIIFASGSPFKDVDLGNGHIGHCNQG 512

Query: 652  NNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAAYMKEEEVLKGVIYPSISSIRNITKE 473
            NNMYLFPGIGLGTLLSG+RIISDGMLQAAAECLAAYM EEEVLKG+IYPS S IR+ITKE
Sbjct: 513  NNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEVLKGIIYPSTSRIRDITKE 572

Query: 472  VASAVVKEAIEEDLAEGYRDMDARELRKLSKEEIETYVKNNMWEPAYPTLVYRKE 308
            VA+AVVKEAIEEDLAEGYR+MDARELRKLS+EEIE YVKNNMW P YPTLVY+K+
Sbjct: 573  VAAAVVKEAIEEDLAEGYREMDARELRKLSQEEIEEYVKNNMWSPDYPTLVYKKD 627


>ref|XP_003520388.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform,
            mitochondrial-like [Glycine max]
          Length = 622

 Score =  925 bits (2391), Expect = 0.0
 Identities = 458/535 (85%), Positives = 494/535 (92%)
 Frame = -1

Query: 1912 FMVDLKRLEVHARDGPADPNALAKWRILNRLHDRNETMYYKVLIEKIEEYAPIVYTPTVG 1733
            FMVDLKRLEV ARDGP+DPNALAKWRILNRLHDRNETMYYKVLI KIEEYAPIVYTPTVG
Sbjct: 88   FMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLIAKIEEYAPIVYTPTVG 147

Query: 1732 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVQGI 1553
            LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPA+QVDMIVVTDGSRILGLGDLGVQGI
Sbjct: 148  LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 207

Query: 1552 GIAIGKLDLYVAAAGLNPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYISVIDE 1373
            GIAIGKLDLYVAAAG+NPQRVLPVMIDVGTNNEKLL+DPLYLGLQ+HRL+G++Y++V+DE
Sbjct: 208  GIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLEDPLYLGLQQHRLDGDDYLAVVDE 267

Query: 1372 FMEAVFTRWPHVIVQFEDFQSKWAFNLLQRYRNKYRMFNDDVQXXXXXXXXXXXXXVRAQ 1193
            FMEAVFTRWP+VIVQFEDFQSKWAF LLQRYRN YRMFNDDVQ             VRAQ
Sbjct: 268  FMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAQ 327

Query: 1192 GKPMIDFPKQKIVLAGAGSAGIGVANAARKTMARMLGNNESAFESARSQFWVVDANGLIT 1013
            G+P+IDFPKQKIV+AGAGSAGIGV NAARKTMARMLGNNE AFESA+SQFWVVDA GLIT
Sbjct: 328  GRPLIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEVAFESAKSQFWVVDAQGLIT 387

Query: 1012 EGRKNIDPQALPFARTMKEVGHQGLREGASLEEVVRQVKPDVLLGLSAVGGLFSNEVLEA 833
            EGR+NIDP ALPFAR +KE+  QGLREGASL EVV+QVKPDVLLGLSAVGGLFS EVLEA
Sbjct: 388  EGRENIDPDALPFARNLKEMDRQGLREGASLVEVVKQVKPDVLLGLSAVGGLFSKEVLEA 447

Query: 832  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSVLGDQLIFASGSPFNNVDLGNGLTGHCNQG 653
            LKGSTSTRPAIFAMSNPTKNAECT EEAFS+LGD +IFASGSPF+NVDLGNG  GHCNQG
Sbjct: 448  LKGSTSTRPAIFAMSNPTKNAECTAEEAFSILGDNIIFASGSPFSNVDLGNGHIGHCNQG 507

Query: 652  NNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAAYMKEEEVLKGVIYPSISSIRNITKE 473
            NNMYLFPGIGLGTLLSGARI+SDGMLQAAAE LA YM EEEVLKG+I+PS S IR+ITK+
Sbjct: 508  NNMYLFPGIGLGTLLSGARIVSDGMLQAAAERLATYMSEEEVLKGIIFPSTSRIRDITKQ 567

Query: 472  VASAVVKEAIEEDLAEGYRDMDARELRKLSKEEIETYVKNNMWEPAYPTLVYRKE 308
            VA+AV+KEA+EEDLAEGY  MDAREL+KLS++EI  YV+NNMW P YPTLVY+KE
Sbjct: 568  VATAVIKEAVEEDLAEGYHGMDARELQKLSEDEIAEYVQNNMWSPEYPTLVYKKE 622


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
            [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
            protein product [Vitis vinifera]
          Length = 625

 Score =  925 bits (2390), Expect = 0.0
 Identities = 461/535 (86%), Positives = 495/535 (92%)
 Frame = -1

Query: 1912 FMVDLKRLEVHARDGPADPNALAKWRILNRLHDRNETMYYKVLIEKIEEYAPIVYTPTVG 1733
            FMVDLKRLEV+ARDGP+DP ALAKWRILNRLHDRNETMYYKVLI  IEEYAPIVYTPTVG
Sbjct: 91   FMVDLKRLEVNARDGPSDPYALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVG 150

Query: 1732 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVQGI 1553
            LVCQNYSGLFRRPRGMYFSA DRGEMMSMVYNWPA+QVDMIVVTDGSRILGLGDLGVQGI
Sbjct: 151  LVCQNYSGLFRRPRGMYFSAADRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 210

Query: 1552 GIAIGKLDLYVAAAGLNPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYISVIDE 1373
            GIAIGKLDLYVAAAG+NPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRL+G+EY++VIDE
Sbjct: 211  GIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLDGDEYLAVIDE 270

Query: 1372 FMEAVFTRWPHVIVQFEDFQSKWAFNLLQRYRNKYRMFNDDVQXXXXXXXXXXXXXVRAQ 1193
            FMEAVFTRWPHVIVQFEDFQSKWAF LLQRYR+ YRMFNDDVQ             VRAQ
Sbjct: 271  FMEAVFTRWPHVIVQFEDFQSKWAFKLLQRYRSTYRMFNDDVQGTAGVAIAGLLGAVRAQ 330

Query: 1192 GKPMIDFPKQKIVLAGAGSAGIGVANAARKTMARMLGNNESAFESARSQFWVVDANGLIT 1013
            GKPMIDFPKQKIV+AGAGSAGIGV NAARKTMARMLGNNESAF+SA SQFWVVDA GLIT
Sbjct: 331  GKPMIDFPKQKIVVAGAGSAGIGVVNAARKTMARMLGNNESAFDSAGSQFWVVDAEGLIT 390

Query: 1012 EGRKNIDPQALPFARTMKEVGHQGLREGASLEEVVRQVKPDVLLGLSAVGGLFSNEVLEA 833
            E R NIDP ALPFAR +KE+  QGLREGASL EVV+QVKPDVLLGLSAVGGLFS EVLEA
Sbjct: 391  EARDNIDPDALPFARKVKEIDRQGLREGASLAEVVKQVKPDVLLGLSAVGGLFSKEVLEA 450

Query: 832  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSVLGDQLIFASGSPFNNVDLGNGLTGHCNQG 653
            LK STSTRPAIFAMSNPTKNAECTPEEAFS++GD +IFASGSPF +VDLGNG  GHCNQG
Sbjct: 451  LKDSTSTRPAIFAMSNPTKNAECTPEEAFSIVGDNVIFASGSPFKDVDLGNGHIGHCNQG 510

Query: 652  NNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAAYMKEEEVLKGVIYPSISSIRNITKE 473
            NNMYLFPGIGLGTLLSG+RIISDGMLQAAAECLAAYM EEEVLKG+IYPSISSIR+ITKE
Sbjct: 511  NNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEVLKGMIYPSISSIRDITKE 570

Query: 472  VASAVVKEAIEEDLAEGYRDMDARELRKLSKEEIETYVKNNMWEPAYPTLVYRKE 308
            VA+AVV+EAIEEDLAEGYR +DAREL KL++EE+ T+V++NMW+P YPTLVY+++
Sbjct: 571  VAAAVVREAIEEDLAEGYRGIDARELCKLNQEELATFVEDNMWDPDYPTLVYKQD 625


>ref|XP_003626824.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|357513073|ref|XP_003626825.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|355520846|gb|AET01300.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|355520847|gb|AET01301.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 628

 Score =  924 bits (2389), Expect = 0.0
 Identities = 456/535 (85%), Positives = 495/535 (92%)
 Frame = -1

Query: 1912 FMVDLKRLEVHARDGPADPNALAKWRILNRLHDRNETMYYKVLIEKIEEYAPIVYTPTVG 1733
            FMVDLKRLEV ARDGP+DPNALAKWRILNRLHDRNETMYYKVLI  IEEYAPIVYTPTVG
Sbjct: 94   FMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVG 153

Query: 1732 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVQGI 1553
            LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPA+QVDMIVVTDGSRILGLGDLGVQGI
Sbjct: 154  LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 213

Query: 1552 GIAIGKLDLYVAAAGLNPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYISVIDE 1373
            GI IGKLDLYVAAAG+NPQRVLPVMIDVGTNN+KLL+DPLYLGLQ+HRL+G++Y++VIDE
Sbjct: 214  GITIGKLDLYVAAAGINPQRVLPVMIDVGTNNKKLLEDPLYLGLQQHRLDGDDYLAVIDE 273

Query: 1372 FMEAVFTRWPHVIVQFEDFQSKWAFNLLQRYRNKYRMFNDDVQXXXXXXXXXXXXXVRAQ 1193
            FMEAVFTRWP+VIVQFEDFQSKWAF LLQRYR  YRMFNDDVQ             VRAQ
Sbjct: 274  FMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRTTYRMFNDDVQGTAGVAIAGLLGAVRAQ 333

Query: 1192 GKPMIDFPKQKIVLAGAGSAGIGVANAARKTMARMLGNNESAFESARSQFWVVDANGLIT 1013
            G+PMIDFPKQKIV+AGAGSAGIGV NAARKTMARMLGNNE AF+SA+SQFWVVDA GLIT
Sbjct: 334  GRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEVAFQSAKSQFWVVDAKGLIT 393

Query: 1012 EGRKNIDPQALPFARTMKEVGHQGLREGASLEEVVRQVKPDVLLGLSAVGGLFSNEVLEA 833
            EGR+NIDP ALPFAR +KE+  QGLREGASL EVV+QVKPDVLLGLSAVGGLFSNEVLEA
Sbjct: 394  EGRENIDPDALPFARNLKEMDRQGLREGASLAEVVKQVKPDVLLGLSAVGGLFSNEVLEA 453

Query: 832  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSVLGDQLIFASGSPFNNVDLGNGLTGHCNQG 653
            LK STSTRPAIFAMSNPTKNAECTP+EAFS+LGD +IFASGSPF+NVDLGNG  GHCNQG
Sbjct: 454  LKDSTSTRPAIFAMSNPTKNAECTPDEAFSILGDNIIFASGSPFSNVDLGNGNIGHCNQG 513

Query: 652  NNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAAYMKEEEVLKGVIYPSISSIRNITKE 473
            NNMYLFPGIGLGTLLSG+RI+SDGMLQAAAE LAAYM EEEVLKG+I+PSIS IR+ITKE
Sbjct: 514  NNMYLFPGIGLGTLLSGSRIVSDGMLQAAAERLAAYMSEEEVLKGIIFPSISRIRDITKE 573

Query: 472  VASAVVKEAIEEDLAEGYRDMDARELRKLSKEEIETYVKNNMWEPAYPTLVYRKE 308
            +A+AV++EA+EEDLAEGY +MDARELRKLS++EI+ YV NNMW P YPTLVYRK+
Sbjct: 574  IAAAVIEEAVEEDLAEGYHEMDARELRKLSRDEIKEYVINNMWNPEYPTLVYRKD 628


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
            predicted protein [Populus trichocarpa]
          Length = 627

 Score =  924 bits (2388), Expect = 0.0
 Identities = 461/535 (86%), Positives = 491/535 (91%)
 Frame = -1

Query: 1912 FMVDLKRLEVHARDGPADPNALAKWRILNRLHDRNETMYYKVLIEKIEEYAPIVYTPTVG 1733
            F  DLKRLEV ARDGP+DP ALAKWRILNRLHDRNETMYY+VLI  IEEYAPIVYTPTVG
Sbjct: 93   FAADLKRLEVQARDGPSDPYALAKWRILNRLHDRNETMYYQVLIANIEEYAPIVYTPTVG 152

Query: 1732 LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVQGI 1553
            LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPA+QVDMIVVTDGSRILGLGDLGVQGI
Sbjct: 153  LVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGI 212

Query: 1552 GIAIGKLDLYVAAAGLNPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYISVIDE 1373
            GIAIGKLDLYVAAAG+NPQRVLPVMIDVGTNNEKLLKDPLYLGLQE+RL+G+EYI+VIDE
Sbjct: 213  GIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQENRLDGDEYIAVIDE 272

Query: 1372 FMEAVFTRWPHVIVQFEDFQSKWAFNLLQRYRNKYRMFNDDVQXXXXXXXXXXXXXVRAQ 1193
            FMEAVFTRWPHVIVQFEDFQSKWAF LLQRYRN YRMFNDDVQ             VRAQ
Sbjct: 273  FMEAVFTRWPHVIVQFEDFQSKWAFKLLQRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAQ 332

Query: 1192 GKPMIDFPKQKIVLAGAGSAGIGVANAARKTMARMLGNNESAFESARSQFWVVDANGLIT 1013
            G+PMIDFPKQKIV+AGAGSAGIGV NAARKTMARMLGNNESAFESA  QFWVVDA GLIT
Sbjct: 333  GRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNESAFESAGRQFWVVDAKGLIT 392

Query: 1012 EGRKNIDPQALPFARTMKEVGHQGLREGASLEEVVRQVKPDVLLGLSAVGGLFSNEVLEA 833
            E R+NIDP+ALPFAR +KE   QGLREGASL EVVR+VKPDVLLGLSAVGGLFSNEVLEA
Sbjct: 393  EERENIDPEALPFARKVKEASRQGLREGASLAEVVREVKPDVLLGLSAVGGLFSNEVLEA 452

Query: 832  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSVLGDQLIFASGSPFNNVDLGNGLTGHCNQG 653
            LKGSTSTRPAIFAMSNPTKNAECTPEEAFS++GD ++FASGSPF +VDLGNG  GHCNQG
Sbjct: 453  LKGSTSTRPAIFAMSNPTKNAECTPEEAFSIVGDNILFASGSPFQDVDLGNGHIGHCNQG 512

Query: 652  NNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAAYMKEEEVLKGVIYPSISSIRNITKE 473
            NNMYLFPGIGLGTLLSG+RIISDGMLQAAAECLA YM EEEVL G+IYPS S IR+ITKE
Sbjct: 513  NNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAEYMAEEEVLNGIIYPSTSRIRDITKE 572

Query: 472  VASAVVKEAIEEDLAEGYRDMDARELRKLSKEEIETYVKNNMWEPAYPTLVYRKE 308
            VA+AVVKEAI+EDLAEGYR+MDAREL+KLS+EEI  YVKNNMW P YPTLVY+++
Sbjct: 573  VAAAVVKEAIKEDLAEGYREMDARELQKLSQEEIVEYVKNNMWSPDYPTLVYKRD 627


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