BLASTX nr result

ID: Coptis25_contig00000601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000601
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37729.3| unnamed protein product [Vitis vinifera]              415   e-113
ref|XP_002283038.1| PREDICTED: uncharacterized protein LOC100248...   415   e-113
ref|XP_002328277.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
ref|XP_004144897.1| PREDICTED: uncharacterized protein LOC101220...   394   e-107
ref|XP_004172819.1| PREDICTED: uncharacterized LOC101221421, par...   383   e-104

>emb|CBI37729.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  415 bits (1067), Expect = e-113
 Identities = 197/296 (66%), Positives = 237/296 (80%), Gaps = 1/296 (0%)
 Frame = -1

Query: 1084 SDTVNKNWGDFASNVSGEWDGHGADFTVEGKPLELPENVVPEAFREWEVKVFDWQTQCPT 905
            S     +W +FA NVSGEWDG+GADF+ EGKP+ELPE VVPEA+REWEVKVFDWQTQCPT
Sbjct: 250  STATTSSWPEFARNVSGEWDGYGADFSSEGKPIELPEFVVPEAYREWEVKVFDWQTQCPT 309

Query: 904  LAKSEENALFYKLIKLLPTVGCEADAATQHSVDEKNIGGVHNKVSAFAYNSSGCYVAVWP 725
            LA+ E++ + YKLIKLLPTVGCEADAAT++S+DE+NIGG HN ++AFAY S+GCYVA+WP
Sbjct: 310  LAEPEDHTVAYKLIKLLPTVGCEADAATRYSIDERNIGGSHNSLAAFAYQSTGCYVALWP 369

Query: 724  KEDNGEFRLLELEYCLVDPQNRESRVRIIQVIRLDKAVFSLQSIRVFCEQWYGPFRNGEQ 545
             ED     L ELE+CL+DPQN+ESRVRIIQV+ LD     LQ+I+VFCEQWYGPFRNGEQ
Sbjct: 370  MEDG----LFELEHCLIDPQNKESRVRIIQVLLLDNRRMVLQNIQVFCEQWYGPFRNGEQ 425

Query: 544  LGGCAIRDSAFAATDATKGSEVTGAWHGSIAVSSLR-SQNSILQELVDHKPQKLVRDDQG 368
            LGGCAIRDSAFA+TDA K SEV G W  S +V+S   SQ ++ QELV+   QK  RD   
Sbjct: 426  LGGCAIRDSAFASTDAMKSSEVVGVWQASSSVTSFHSSQTNVFQELVEGITQKSARDGDD 485

Query: 367  LVLLPKQLWCALKESEDGETYGEVGWLLKQGSAITSRCSFSKDGKLKEVSIGHETL 200
            L+LLPKQLWC++ E EDG+T  EVGWLL +G A+TSRC FSKD  LKE+++  E+L
Sbjct: 486  LILLPKQLWCSVSEREDGDTCCEVGWLLDRGHAMTSRCIFSKDANLKEITVARESL 541


>ref|XP_002283038.1| PREDICTED: uncharacterized protein LOC100248592 [Vitis vinifera]
          Length = 375

 Score =  415 bits (1067), Expect = e-113
 Identities = 197/296 (66%), Positives = 237/296 (80%), Gaps = 1/296 (0%)
 Frame = -1

Query: 1084 SDTVNKNWGDFASNVSGEWDGHGADFTVEGKPLELPENVVPEAFREWEVKVFDWQTQCPT 905
            S     +W +FA NVSGEWDG+GADF+ EGKP+ELPE VVPEA+REWEVKVFDWQTQCPT
Sbjct: 79   STATTSSWPEFARNVSGEWDGYGADFSSEGKPIELPEFVVPEAYREWEVKVFDWQTQCPT 138

Query: 904  LAKSEENALFYKLIKLLPTVGCEADAATQHSVDEKNIGGVHNKVSAFAYNSSGCYVAVWP 725
            LA+ E++ + YKLIKLLPTVGCEADAAT++S+DE+NIGG HN ++AFAY S+GCYVA+WP
Sbjct: 139  LAEPEDHTVAYKLIKLLPTVGCEADAATRYSIDERNIGGSHNSLAAFAYQSTGCYVALWP 198

Query: 724  KEDNGEFRLLELEYCLVDPQNRESRVRIIQVIRLDKAVFSLQSIRVFCEQWYGPFRNGEQ 545
             ED     L ELE+CL+DPQN+ESRVRIIQV+ LD     LQ+I+VFCEQWYGPFRNGEQ
Sbjct: 199  MEDG----LFELEHCLIDPQNKESRVRIIQVLLLDNRRMVLQNIQVFCEQWYGPFRNGEQ 254

Query: 544  LGGCAIRDSAFAATDATKGSEVTGAWHGSIAVSSLR-SQNSILQELVDHKPQKLVRDDQG 368
            LGGCAIRDSAFA+TDA K SEV G W  S +V+S   SQ ++ QELV+   QK  RD   
Sbjct: 255  LGGCAIRDSAFASTDAMKSSEVVGVWQASSSVTSFHSSQTNVFQELVEGITQKSARDGDD 314

Query: 367  LVLLPKQLWCALKESEDGETYGEVGWLLKQGSAITSRCSFSKDGKLKEVSIGHETL 200
            L+LLPKQLWC++ E EDG+T  EVGWLL +G A+TSRC FSKD  LKE+++  E+L
Sbjct: 315  LILLPKQLWCSVSEREDGDTCCEVGWLLDRGHAMTSRCIFSKDANLKEITVARESL 370


>ref|XP_002328277.1| predicted protein [Populus trichocarpa] gi|222837792|gb|EEE76157.1|
            predicted protein [Populus trichocarpa]
          Length = 280

 Score =  398 bits (1023), Expect = e-108
 Identities = 186/280 (66%), Positives = 228/280 (81%), Gaps = 1/280 (0%)
 Frame = -1

Query: 1063 WGDFASNVSGEWDGHGADFTVEGKPLELPENVVPEAFREWEVKVFDWQTQCPTLAKSEEN 884
            W +FAS +SGEWDG GADFT EGKP+ELPE+VVPEA+REWEVKVFDWQTQCPTLA+ ++ 
Sbjct: 1    WSEFASKISGEWDGFGADFTTEGKPIELPESVVPEAYREWEVKVFDWQTQCPTLAQPQDF 60

Query: 883  ALFYKLIKLLPTVGCEADAATQHSVDEKNIGGVHNKVSAFAYNSSGCYVAVWPKEDNGEF 704
             + YK IKLLPTVGCEADAAT++S+DE+ +GGV N VSAFAY S G YVAVWP  DNG+ 
Sbjct: 61   LMTYKTIKLLPTVGCEADAATRYSIDERVVGGVENNVSAFAYQSGGSYVAVWPIVDNGQC 120

Query: 703  RLLELEYCLVDPQNRESRVRIIQVIRLDKAVFSLQSIRVFCEQWYGPFRNGEQLGGCAIR 524
            + LELE+CL++PQ++ESR+RI+QV+ +      LQSIRVFCEQWYGPFRNG+QLGGCAIR
Sbjct: 121  KQLELEHCLINPQDKESRMRIVQVVHVANTAIELQSIRVFCEQWYGPFRNGDQLGGCAIR 180

Query: 523  DSAFAATDATKGSEVTGAWHGSIAVSSL-RSQNSILQELVDHKPQKLVRDDQGLVLLPKQ 347
            DSAFA+T + + SEV G W G  AV++   SQN +LQEL D   QK VRD++ ++LLP+Q
Sbjct: 181  DSAFASTASLRASEVVGVWQGPSAVATFDSSQNVLLQELSDDIVQKSVRDERDIILLPRQ 240

Query: 346  LWCALKESEDGETYGEVGWLLKQGSAITSRCSFSKDGKLK 227
            LWC+LK ++DGET  EVGWL  +GSA+TSRC FS D KLK
Sbjct: 241  LWCSLKGNKDGETCCEVGWLFDRGSAVTSRCIFSSDVKLK 280


>ref|XP_004144897.1| PREDICTED: uncharacterized protein LOC101220371 [Cucumis sativus]
            gi|449471978|ref|XP_004153459.1| PREDICTED:
            uncharacterized protein LOC101221421 [Cucumis sativus]
          Length = 379

 Score =  394 bits (1011), Expect = e-107
 Identities = 194/309 (62%), Positives = 239/309 (77%), Gaps = 6/309 (1%)
 Frame = -1

Query: 1111 SDIQLQETSSDTV-NKNWGDFASNVSGEWDGHGADFTVEGKPLELPENVVPEAFREWEVK 935
            SD  +Q  SS +     W DFA NVSGEWDG+GADF+ EG P+ELPE+VVP+A+REWEVK
Sbjct: 69   SDAHVQSYSSCSAPGPGWSDFAQNVSGEWDGYGADFSYEGTPIELPESVVPDAYREWEVK 128

Query: 934  VFDWQTQCPTLAKSEENALFYKLIKLLPTVGCEADAATQHSVDEKNIG---GVHNKVSAF 764
            VFDWQTQCPTLA+ E+ +L YK IKLLPTVGCEADAAT++S+DE+NI    G +++V+AF
Sbjct: 129  VFDWQTQCPTLAEPEQPSLMYKTIKLLPTVGCEADAATRYSIDERNIRDGIGGNDEVNAF 188

Query: 763  AYNSSGCYVAVWPKEDNGEFRLLELEYCLVDPQNRESRVRIIQVIRLDKAVFSLQSIRVF 584
             Y  SGCYV VWP E  G  +L+ELE+CLV+P +RESRVR++QV+R++ +   LQ+IRVF
Sbjct: 189  GYQRSGCYVVVWPIEVRGSCKLMELEHCLVNPHDRESRVRVVQVVRVEGSRLVLQNIRVF 248

Query: 583  CEQWYGPFRNGEQLGGCAIRDSAFAATDATKGSEVTGAWHGSIAVSSL-RSQNSILQELV 407
            CEQWYGPFRNGEQLGGCAI DSAFA+T A K SEV G W G ++V+    SQ +++QEL+
Sbjct: 249  CEQWYGPFRNGEQLGGCAIADSAFASTAALKASEVVGEWQGPVSVARFDGSQINVIQELL 308

Query: 406  DHKPQKLVRDDQGLVLLPKQLWCALKESED-GETYGEVGWLLKQGSAITSRCSFSKDGKL 230
                QK VR +  L LLPKQLWC+LKES+D G+TY EVGWL   G AITSRC FS   KL
Sbjct: 309  ADNVQKSVRTESELKLLPKQLWCSLKESKDSGDTYCEVGWLFAHGHAITSRCIFSSTSKL 368

Query: 229  KEVSIGHET 203
            KE+SI +ET
Sbjct: 369  KEISIANET 377


>ref|XP_004172819.1| PREDICTED: uncharacterized LOC101221421, partial [Cucumis sativus]
          Length = 369

 Score =  383 bits (984), Expect = e-104
 Identities = 189/301 (62%), Positives = 232/301 (77%), Gaps = 6/301 (1%)
 Frame = -1

Query: 1111 SDIQLQETSSDTV-NKNWGDFASNVSGEWDGHGADFTVEGKPLELPENVVPEAFREWEVK 935
            SD  +Q  SS +     W DFA NVSGEWDG+GADF+ EG P+ELPE+VVP+A+REWEVK
Sbjct: 69   SDAHVQSYSSCSAPGPGWSDFAQNVSGEWDGYGADFSYEGTPIELPESVVPDAYREWEVK 128

Query: 934  VFDWQTQCPTLAKSEENALFYKLIKLLPTVGCEADAATQHSVDEKNIG---GVHNKVSAF 764
            VFDWQTQCPTLA+ E+ +L YK IKLLPTVGCEADAAT++S+DE+NI    G +++V+AF
Sbjct: 129  VFDWQTQCPTLAEPEQPSLMYKTIKLLPTVGCEADAATRYSIDERNIRDGIGGNDEVNAF 188

Query: 763  AYNSSGCYVAVWPKEDNGEFRLLELEYCLVDPQNRESRVRIIQVIRLDKAVFSLQSIRVF 584
             Y  SGCYV VWP E  G  +L+ELE+CLV+P +RESRVR++QV+R++ +   LQ+IRVF
Sbjct: 189  GYQRSGCYVVVWPIEVRGSCKLMELEHCLVNPHDRESRVRVVQVVRVEGSRLVLQNIRVF 248

Query: 583  CEQWYGPFRNGEQLGGCAIRDSAFAATDATKGSEVTGAWHGSIAVSSL-RSQNSILQELV 407
            CEQWYGPFRNGEQLGGCAI DSAFA+T A K SEV G W G ++V+    SQ +++QEL+
Sbjct: 249  CEQWYGPFRNGEQLGGCAIADSAFASTAALKASEVVGEWQGPVSVARFDGSQINVIQELL 308

Query: 406  DHKPQKLVRDDQGLVLLPKQLWCALKESED-GETYGEVGWLLKQGSAITSRCSFSKDGKL 230
                QK VR +  L LLPKQLWC+LKES+D G+TY EVGWL   G AITSRC FS   KL
Sbjct: 309  ADNVQKSVRTESELKLLPKQLWCSLKESKDSGDTYCEVGWLFAHGHAITSRCIFSSTSKL 368

Query: 229  K 227
            K
Sbjct: 369  K 369


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