BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000600
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera] gi...   268   1e-69
gb|AFK39450.1| unknown [Lotus japonicus]                              247   4e-63
gb|AFK42932.1| unknown [Medicago truncatula]                          247   5e-63
ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]       242   1e-61
ref|XP_003573688.1| PREDICTED: protein RER1A-like [Brachypodium ...   239   1e-60

>ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera]
           gi|296082366|emb|CBI21371.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  268 bits (686), Expect = 1e-69
 Identities = 133/191 (69%), Positives = 148/191 (77%), Gaps = 3/191 (1%)
 Frame = +2

Query: 110 DLSYPSFVTD---YTLNLSRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIV 280
           DLS  S VT    +T ++SRKYQHLLDKSTPH+LNRWIGF  +AFIYIVRVYF++G+YIV
Sbjct: 13  DLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYIVRVYFVQGFYIV 72

Query: 281 SXXXXXXXXXXXXAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLP 460
           S             FLSPQVDPE+ +              GP LPTR +DEFRPFVRRLP
Sbjct: 73  SYGLGIYILNLLIGFLSPQVDPEIQELVD-----------GPTLPTRGSDEFRPFVRRLP 121

Query: 461 EFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPF 640
           EFKFWYS+TKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLF LTM++QI+HMIKYKYVPF
Sbjct: 122 EFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVPF 181

Query: 641 SLGKQRYSGKR 673
           S GKQRY GKR
Sbjct: 182 SFGKQRYGGKR 192


>gb|AFK39450.1| unknown [Lotus japonicus]
          Length = 191

 Score =  247 bits (631), Expect = 4e-63
 Identities = 119/188 (63%), Positives = 142/188 (75%)
 Frame = +2

Query: 110 DLSYPSFVTDYTLNLSRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXX 289
           ++S  + ++ + L LS++YQH+LDK+TPHVL RW+G  +VA IY++RVY +EG+YIVS  
Sbjct: 6   EVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYA 65

Query: 290 XXXXXXXXXXAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFK 469
                      FLSPQVDPE+              D GP LPT  +DEFRPFVRRLPEFK
Sbjct: 66  LGIYILNLLIGFLSPQVDPEVY-------------DDGPTLPTSGSDEFRPFVRRLPEFK 112

Query: 470 FWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLG 649
           FWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS G
Sbjct: 113 FWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFG 172

Query: 650 KQRYSGKR 673
           KQRY+GKR
Sbjct: 173 KQRYTGKR 180


>gb|AFK42932.1| unknown [Medicago truncatula]
          Length = 192

 Score =  247 bits (630), Expect = 5e-63
 Identities = 118/190 (62%), Positives = 138/190 (72%)
 Frame = +2

Query: 104 TPDLSYPSFVTDYTLNLSRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVS 283
           T D S  + +T +    SR+YQH+LDKSTPHV  RW+G  +VA +Y++RVY ++G+Y+VS
Sbjct: 3   TEDTSPAAAITRWKFEASRRYQHILDKSTPHVSQRWLGCLVVALVYVLRVYIVQGFYVVS 62

Query: 284 XXXXXXXXXXXXAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPE 463
                        FLSPQVDPE+            D D GP LPT  +DEFRPFVRRLPE
Sbjct: 63  YGLGIYILNLLIGFLSPQVDPEIL-----------DADNGPSLPTSGSDEFRPFVRRLPE 111

Query: 464 FKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFS 643
           FKFWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS
Sbjct: 112 FKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIAHMIKYKYVPFS 171

Query: 644 LGKQRYSGKR 673
            GKQRY  KR
Sbjct: 172 FGKQRYDRKR 181


>ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]
          Length = 191

 Score =  242 bits (617), Expect = 1e-61
 Identities = 116/188 (61%), Positives = 139/188 (73%)
 Frame = +2

Query: 110 DLSYPSFVTDYTLNLSRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXX 289
           D S  + ++ +   +S++YQH+LDK+TPHVL RWIG  +VA +Y++RVY ++G+YIVS  
Sbjct: 8   DHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYA 67

Query: 290 XXXXXXXXXXAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFK 469
                      FLSPQVDPE++               GP LPTR +DEFRPFVRRLPEFK
Sbjct: 68  LGIYILNLLIGFLSPQVDPEISD--------------GPTLPTRGSDEFRPFVRRLPEFK 113

Query: 470 FWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLG 649
           FWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS G
Sbjct: 114 FWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFG 173

Query: 650 KQRYSGKR 673
           K RY GKR
Sbjct: 174 KLRYDGKR 181


>ref|XP_003573688.1| PREDICTED: protein RER1A-like [Brachypodium distachyon]
          Length = 218

 Score =  239 bits (610), Expect = 1e-60
 Identities = 112/173 (64%), Positives = 132/173 (76%)
 Frame = +2

Query: 155 SRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXXXXXXXXXXXXAFLSP 334
           SR++QHLLD+STPHV  RW+G   V  +Y +R +F+ GYYIV+            AFLSP
Sbjct: 44  SRRFQHLLDRSTPHVGRRWLGLAGVVLVYALRAWFVGGYYIVTYALGIYILNLLIAFLSP 103

Query: 335 QVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFKFWYSMTKAFCIAFVM 514
           QVDPE+ +  G           GP LPTR++DEFRPFVRRLPEFKFWYS+ KAFCIAFVM
Sbjct: 104 QVDPEVAEVLG----------EGPALPTRASDEFRPFVRRLPEFKFWYSIVKAFCIAFVM 153

Query: 515 TFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLGKQRYSGKR 673
           TFF VFDVPVFWPILLFYW+VLF +TMK+QILHM+KY+YVPF+ GKQRYSGKR
Sbjct: 154 TFFGVFDVPVFWPILLFYWVVLFTVTMKRQILHMVKYRYVPFTFGKQRYSGKR 206