BLASTX nr result

ID: Coptis25_contig00000594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000594
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [C...   124   2e-26
ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|2...   122   9e-26
gb|ABK94415.1| unknown [Populus trichocarpa]                          121   1e-25
gb|AFK46465.1| unknown [Lotus japonicus]                              120   2e-25
emb|CBI22260.3| unnamed protein product [Vitis vinifera]              120   2e-25

>ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [Cucumis sativus]
           gi|449481352|ref|XP_004156157.1| PREDICTED:
           transmembrane protein 230-like [Cucumis sativus]
          Length = 116

 Score =  124 bits (310), Expect = 2e-26
 Identities = 57/97 (58%), Positives = 64/97 (65%)
 Frame = -3

Query: 685 DYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXXXXXXFTGHMGGDRSQAYG 506
           D  G++ DPRF YTPK+FD++PWK                       TGHM G++SQAYG
Sbjct: 20  DSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYG 79

Query: 505 LLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 395
           LL LG L FLPGFYETRIAYYAWRGA GYRFASIP Y
Sbjct: 80  LLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116


>ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|222854011|gb|EEE91558.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  122 bits (305), Expect = 9e-26
 Identities = 58/97 (59%), Positives = 67/97 (69%)
 Frame = -3

Query: 685 DYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXXXXXXFTGHMGGDRSQAYG 506
           D  G + DPRF YTP SFDRVPWK                      FTGHMGG++SQAYG
Sbjct: 19  DKFGVQYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSLSFFIFTGHMGGEKSQAYG 78

Query: 505 LLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 395
           LL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 79  LLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|ABK94415.1| unknown [Populus trichocarpa]
          Length = 115

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/97 (59%), Positives = 66/97 (68%)
 Frame = -3

Query: 685 DYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXXXXXXFTGHMGGDRSQAYG 506
           D  G   DPRF YTP SFDRVPWK                      FTGHMGG++SQAYG
Sbjct: 19  DKFGVHYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSLSFFIFTGHMGGEKSQAYG 78

Query: 505 LLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 395
           LL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 79  LLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|AFK46465.1| unknown [Lotus japonicus]
          Length = 116

 Score =  120 bits (301), Expect = 2e-25
 Identities = 59/100 (59%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
 Frame = -3

Query: 685 DYNGSED---DPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXXXXXXFTGHMGGDRSQ 515
           DY G  +   DPRF YTPK+ DRVPWK                      FTGHMGG+RSQ
Sbjct: 17  DYVGDRNRPFDPRFDYTPKALDRVPWKSIALALFLLFLGTGLLFLSYFIFTGHMGGERSQ 76

Query: 514 AYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 395
           AYGLL LG L+FLPGFYETR+AYYAWRGA+GYRF++IP Y
Sbjct: 77  AYGLLALGFLSFLPGFYETRLAYYAWRGAKGYRFSAIPDY 116


>emb|CBI22260.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/91 (63%), Positives = 62/91 (68%)
 Frame = -3

Query: 673 SEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXXXXXXFTGHMGGDRSQAYGLLGL 494
           S+ DPRF YTPKSFD++PWK                      FTGHMGGDRSQAYGLL L
Sbjct: 22  SKFDPRFDYTPKSFDKIPWKSIALALFLLLLGILLLFLSIFIFTGHMGGDRSQAYGLLAL 81

Query: 493 GILAFLPGFYETRIAYYAWRGAQGYRFASIP 401
           G L FLPGFYETRIAYY+WRGA GYRF SIP
Sbjct: 82  GALTFLPGFYETRIAYYSWRGAAGYRFGSIP 112


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