BLASTX nr result

ID: Coptis25_contig00000593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000593
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU21483.1| unknown [Glycine max]                                  376   e-102
ref|XP_003546765.1| PREDICTED: coiled-coil domain-containing pro...   374   e-101
gb|ABK95462.1| unknown [Populus trichocarpa]                          368   2e-99
gb|ACJ84397.1| unknown [Medicago truncatula] gi|388498032|gb|AFK...   366   1e-98
ref|XP_002518796.1| Coiled-coil domain-containing protein, putat...   361   2e-97

>gb|ACU21483.1| unknown [Glycine max]
          Length = 326

 Score =  376 bits (965), Expect = e-102
 Identities = 208/335 (62%), Positives = 237/335 (70%), Gaps = 4/335 (1%)
 Frame = -2

Query: 1230 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 1051
            MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1    MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 1050 EDVLGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEAADK 871
            EDV+GETYLGIQIFRFYFKCTKCSAE+TMKTDPQNSDY+VESGATRNFEPWRAEDE ADK
Sbjct: 61   EDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEEADK 120

Query: 870  EQRKRDGEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHAGVSADEMLEALKRTA 691
             + KRD EEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA V+ DEMLEAL+RTA
Sbjct: 121  TKEKRDAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVTVDEMLEALQRTA 180

Query: 690  XXXXXXXXXXXEALVKAL--FQVPXXXXXXXXXXXXXXXXXXXXXXXXXEPRNSNAKRAK 517
                       EAL+K++                               E  +SN KR K
Sbjct: 181  ADKEKRLEQEDEALIKSVVFHNSDGFVRRIRDEDIETEEQLDQFSNGHGETSSSNTKRQK 240

Query: 516  ISID-HGNPTDFLSKNSIFDASKDKAISDGAKCSKNAKFIVKSPFISISVVKKPSVADAE 340
            IS D    PTD L+K S+ D+ K +    G K +           + ISV+KKP  +DA+
Sbjct: 241  ISEDCPSKPTDTLTKASLDDSGKQENSRSGGKLNS---------LVRISVIKKPVTSDAK 291

Query: 339  D-RPGEGKNQEKESHIIKANATLQALGQDYGSDED 238
                 E K QEK++    A+  L +L Q+YGSD++
Sbjct: 292  SPAEPEQKKQEKDNETNTASGLL-SLCQNYGSDDE 325


>ref|XP_003546765.1| PREDICTED: coiled-coil domain-containing protein 94 homolog [Glycine
            max]
          Length = 326

 Score =  374 bits (961), Expect = e-101
 Identities = 207/335 (61%), Positives = 236/335 (70%), Gaps = 4/335 (1%)
 Frame = -2

Query: 1230 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 1051
            MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1    MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 1050 EDVLGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEAADK 871
            EDV+GETYLGIQIFRFYFKCTKCSAE+TMKTDPQNSDY+VESGATRNFEPWRAEDE ADK
Sbjct: 61   EDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEEADK 120

Query: 870  EQRKRDGEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHAGVSADEMLEALKRTA 691
             + KRD EEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA V+ DEMLEAL+RTA
Sbjct: 121  TKEKRDAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVTVDEMLEALQRTA 180

Query: 690  XXXXXXXXXXXEALVKAL--FQVPXXXXXXXXXXXXXXXXXXXXXXXXXEPRNSNAKRAK 517
                       EAL+K++                               E  +SN KR K
Sbjct: 181  ADKEKRLEQEDEALIKSVVFHNSDGFVRRIRDEDIETEEQLDQFSNGHGETSSSNTKRQK 240

Query: 516  ISID-HGNPTDFLSKNSIFDASKDKAISDGAKCSKNAKFIVKSPFISISVVKKPSVADAE 340
            IS D    PTD L+K S+ D+ K +    G K +           + ISV+KKP  +D +
Sbjct: 241  ISEDCPSKPTDTLTKASLDDSGKQENSRSGGKLNS---------LVRISVIKKPVTSDVK 291

Query: 339  D-RPGEGKNQEKESHIIKANATLQALGQDYGSDED 238
                 E K QEK++    A+  L +L Q+YGSD++
Sbjct: 292  SPAEPEQKKQEKDNETNTASGLL-SLCQNYGSDDE 325


>gb|ABK95462.1| unknown [Populus trichocarpa]
          Length = 327

 Score =  368 bits (945), Expect = 2e-99
 Identities = 200/332 (60%), Positives = 232/332 (69%), Gaps = 1/332 (0%)
 Frame = -2

Query: 1230 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 1051
            MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1    MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 1050 EDVLGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEAADK 871
            EDV+GETYLGIQIFRFYFKCT+CSAEL MKTDPQNSDY VESGATRNFEPWRAEDE  D 
Sbjct: 61   EDVIGETYLGIQIFRFYFKCTRCSAELAMKTDPQNSDYTVESGATRNFEPWRAEDEELDT 120

Query: 870  EQRKRDGEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHAGVSADEMLEALKRTA 691
            E++KR  EEMGDAMKSLENRTLDSKRE+DILAALDEMKSMKSRHA VS D MLEAL+RTA
Sbjct: 121  EKKKRVAEEMGDAMKSLENRTLDSKREIDILAALDEMKSMKSRHATVSVDAMLEALQRTA 180

Query: 690  XXXXXXXXXXXEALVKALFQVPXXXXXXXXXXXXXXXXXXXXXXXXXEPRNSNAKRAKIS 511
                       EAL+K+LFQ                              +   K+ K++
Sbjct: 181  SEKERKLEEEDEALIKSLFQ------QRQTEVIRRISDEDSDDDEDFNMSSDKLKKRKVA 234

Query: 510  ID-HGNPTDFLSKNSIFDASKDKAISDGAKCSKNAKFIVKSPFISISVVKKPSVADAEDR 334
             +    PTD L+K S+ D+S +   S  +    + K   +SP I ISV KKP      ++
Sbjct: 235  DEVSSKPTDSLAKASVSDSSNNSENSSASGTQNDGKPKFRSPLIRISVKKKPVAVSDRNK 294

Query: 333  PGEGKNQEKESHIIKANATLQALGQDYGSDED 238
            P E K Q ++S     +  LQ+L Q+Y SD++
Sbjct: 295  PEENK-QVEQSTANDPSIGLQSLCQNYDSDDE 325


>gb|ACJ84397.1| unknown [Medicago truncatula] gi|388498032|gb|AFK37082.1| unknown
            [Medicago truncatula]
          Length = 327

 Score =  366 bits (939), Expect = 1e-98
 Identities = 204/338 (60%), Positives = 238/338 (70%), Gaps = 7/338 (2%)
 Frame = -2

Query: 1230 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 1051
            MGERKVLNKY+PPDFDPAKLPR R+PKN QIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1    MGERKVLNKYYPPDFDPAKLPRVRRPKNLQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 1050 EDVLGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEAADK 871
            EDV+GETYLGIQIFRFYFKCT+CSAELTMKTDPQNSDYVVESGATRNFEPWRAEDE  D+
Sbjct: 61   EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEETDE 120

Query: 870  EQRKRDGEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHAGVSADEMLEALKRTA 691
             ++KR+ EEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA VS DEML AL+RTA
Sbjct: 121  MKKKRETEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTA 180

Query: 690  XXXXXXXXXXXEALVKALF----QVPXXXXXXXXXXXXXXXXXXXXXXXXXEPRNSNAKR 523
                       EAL+K++F    +VP                         E  N N KR
Sbjct: 181  ADKEKRIEEEDEALIKSIFSNKPEVP--IRRIRDEDIEDEEELFQFSNGHGESSNDNLKR 238

Query: 522  AKISID-HGNPTDFLSKNSIFDASKDKAISDGAKCSKNAKFIVKSPFISISVVKKPSVAD 346
             KIS D     TD L+K  + D+ K + ++ G + S        +P ++I+V+KKP +++
Sbjct: 239  QKISEDLPRKATDTLTKAGLDDSDKQEKLTAGRRKS--------NPLVTIAVIKKPGISN 290

Query: 345  AEDRPGEGKNQEKESHIIKANAT--LQALGQDYGSDED 238
               R  E   Q+K+    K N    L +L Q+YGS ++
Sbjct: 291  V--RSAEDDKQKKKEEDDKTNTAGGLLSLCQNYGSSDE 326


>ref|XP_002518796.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
            gi|223542177|gb|EEF43721.1| Coiled-coil domain-containing
            protein, putative [Ricinus communis]
          Length = 360

 Score =  361 bits (927), Expect = 2e-97
 Identities = 207/360 (57%), Positives = 235/360 (65%), Gaps = 29/360 (8%)
 Frame = -2

Query: 1230 MGERKVLNKYFPPDFDPAKLPRRRQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 1051
            MGERKVLNKY+PPDFDP+KLPR R+PKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1    MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 1050 EDVLGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEAADK 871
            EDVLGETYLGIQIFRFYFKCTKCSAEL +KTDPQNSDYVVESGATRNFEPWRAEDE ADK
Sbjct: 61   EDVLGETYLGIQIFRFYFKCTKCSAELAIKTDPQNSDYVVESGATRNFEPWRAEDEEADK 120

Query: 870  EQRKRDGEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHAGVSADEMLEALKRTA 691
            E++KRD EEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHA VS D MLEAL+RTA
Sbjct: 121  ERQKRDAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDAMLEALQRTA 180

Query: 690  XXXXXXXXXXXEALVKALFQVPXXXXXXXXXXXXXXXXXXXXXXXXXEPRNSNA------ 529
                       EAL+K++F+                           +  N N       
Sbjct: 181  ANKEKKLEEEDEALIKSIFERRPKEVIRRISDEDFDDDDDDDTVGSGKLSNGNGETSTHN 240

Query: 528  -KRAKISID-HGNPTDFLSKNSIFDASKDKAI--------------------SDGAKCSK 415
             KR K+S +    PTD L+K +  D+S +K I                    S G     
Sbjct: 241  LKRRKVSDELPSKPTDSLTKANPVDSSNNKGILTIGFMMILTIHIAWMTAESSSGLGSQT 300

Query: 414  NAKFIVKSPFISISVVKKPSV-ADAEDRPGEGKNQEKESHIIKANATLQALGQDYGSDED 238
             AK     P + ISVVKKP V +D+        +++ +         L +L Q+Y SD+D
Sbjct: 301  EAKRSYLPPMVRISVVKKPVVSSDSIKTAIADDSKQVDQGSSDVGTGLLSLCQNYDSDDD 360


Top