BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000586
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   256   5e-66
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   254   2e-65
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   249   8e-64
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   247   2e-63
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   246   5e-63

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  256 bits (654), Expect = 5e-66
 Identities = 128/176 (72%), Positives = 138/176 (78%), Gaps = 5/176 (2%)
 Frame = +2

Query: 116 SAMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRL 295
           S MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRL
Sbjct: 55  SIMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRL 114

Query: 296 HGKDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXX 475
           HGKDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G    
Sbjct: 115 HGKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAK 174

Query: 476 XXXXXXXXXXQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE*CYVSF 628
                     QSI+MVKAP  +       LP  K KV QQQ++EN AMEE C+ ++
Sbjct: 175 EQREAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE-CFSTY 229


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  254 bits (649), Expect = 2e-65
 Identities = 126/168 (75%), Positives = 133/168 (79%), Gaps = 5/168 (2%)
 Frame = +2

Query: 122 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 301
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 302 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 481
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 482 XXXXXXXXQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 610
                   QSI+MVKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  249 bits (635), Expect = 8e-64
 Identities = 122/168 (72%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
 Frame = +2

Query: 122 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 301
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 302 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 481
           KDMTQDSTFEFERKRNRPERYDR++ EN LKAI KIDK+RV R E HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 482 XXXXXXXXQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 610
                   Q I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  247 bits (631), Expect = 2e-63
 Identities = 120/168 (71%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
 Frame = +2

Query: 122 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 301
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 302 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 481
           KDMTQDSTFEFERKRNRPERYDR++ EN LK I KIDK+RV+R E HHK RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 482 XXXXXXXXQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 610
                   Q I++VKAP  +       LP  K KV QQQ++EN AMEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  246 bits (628), Expect = 5e-63
 Identities = 122/168 (72%), Positives = 129/168 (76%), Gaps = 5/168 (2%)
 Frame = +2

Query: 122 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 301
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 302 KDMTQDSTFEFERKRNRPERYDRDIVENTLKAIKKIDKVRVARAETHHKIRMGGXXXXXX 481
           KDMTQDSTFEFERKRNRPERYDR++ ENTLKAIKKIDKVRV R   HH +RM G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 482 XXXXXXXXQSINMVKAPGAVS-----LLPARKHKVPQQQTQENRAMEE 610
                   Q I+MVKAP  +       LP  K KV + Q +EN  MEE
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168