BLASTX nr result
ID: Coptis25_contig00000578
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000578 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max] 236 2e-60 tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] 235 2e-60 ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea ma... 235 2e-60 gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japo... 234 5e-60 gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indi... 234 5e-60 >ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max] Length = 776 Score = 236 bits (601), Expect = 2e-60 Identities = 110/141 (78%), Positives = 130/141 (92%) Frame = +1 Query: 1 GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180 GVYGAFLLACYD+ N+E+QSICKIGTGFSEA+LEERS+SLR KVIP+ K+YYRF ET+NP Sbjct: 634 GVYGAFLLACYDNDNEEFQSICKIGTGFSEAVLEERSSSLRSKVIPKPKAYYRFGETINP 693 Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360 DVWFE +EVWEVKAADL+ISPVHRAA G+VDPNKGISLRFPRLLR+R DK PEQA+SS+Q Sbjct: 694 DVWFEASEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLLRVRPDKAPEQASSSEQ 753 Query: 361 VAEMYRSQKIHQSNNQDEQED 423 VAEMY++QK + +NNQ++ ED Sbjct: 754 VAEMYKAQKHNHTNNQNDDED 774 >tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] Length = 909 Score = 235 bits (600), Expect = 2e-60 Identities = 109/141 (77%), Positives = 129/141 (91%) Frame = +1 Query: 1 GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180 GV+G+FLLACYD+ N+EYQ+IC IGTGFSE LEERSASLR KVI + K+YYRF +T+NP Sbjct: 768 GVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKPKAYYRFGDTMNP 827 Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360 DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLRLR+DK+PEQAT+SDQ Sbjct: 828 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRLRDDKSPEQATTSDQ 887 Query: 361 VAEMYRSQKIHQSNNQDEQED 423 VA+MYRSQKI+ NQ++++D Sbjct: 888 VADMYRSQKINHGYNQEDEDD 908 >ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea mays] gi|224032747|gb|ACN35449.1| unknown [Zea mays] Length = 452 Score = 235 bits (600), Expect = 2e-60 Identities = 109/141 (77%), Positives = 129/141 (91%) Frame = +1 Query: 1 GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180 GV+G+FLLACYD+ N+EYQ+IC IGTGFSE LEERSASLR KVI + K+YYRF +T+NP Sbjct: 311 GVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKPKAYYRFGDTMNP 370 Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360 DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLRLR+DK+PEQAT+SDQ Sbjct: 371 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRLRDDKSPEQATTSDQ 430 Query: 361 VAEMYRSQKIHQSNNQDEQED 423 VA+MYRSQKI+ NQ++++D Sbjct: 431 VADMYRSQKINHGYNQEDEDD 451 >gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group] gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group] gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group] Length = 810 Score = 234 bits (597), Expect = 5e-60 Identities = 107/141 (75%), Positives = 128/141 (90%) Frame = +1 Query: 1 GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180 GVYG+FLLACYD+ N+EYQ+IC IGTGFSE LEERS SLR K IP+ K+YYRFA+T++P Sbjct: 668 GVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTMDP 727 Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360 DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLR+R+DK PEQAT+S+Q Sbjct: 728 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEQATTSEQ 787 Query: 361 VAEMYRSQKIHQSNNQDEQED 423 VA+MYR+QKI+ +NN ++ ED Sbjct: 788 VADMYRAQKIYHANNNNDDED 808 >gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group] gi|222613048|gb|EEE51180.1| hypothetical protein OsJ_31972 [Oryza sativa Japonica Group] Length = 627 Score = 234 bits (597), Expect = 5e-60 Identities = 107/141 (75%), Positives = 128/141 (90%) Frame = +1 Query: 1 GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180 GVYG+FLLACYD+ N+EYQ+IC IGTGFSE LEERS SLR K IP+ K+YYRFA+T++P Sbjct: 485 GVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTMDP 544 Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360 DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLR+R+DK PEQAT+S+Q Sbjct: 545 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEQATTSEQ 604 Query: 361 VAEMYRSQKIHQSNNQDEQED 423 VA+MYR+QKI+ +NN ++ ED Sbjct: 605 VADMYRAQKIYHANNNNDDED 625