BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000578
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]        236   2e-60
tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]    235   2e-60
ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea ma...   235   2e-60
gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japo...   234   5e-60
gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indi...   234   5e-60

>ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 776

 Score =  236 bits (601), Expect = 2e-60
 Identities = 110/141 (78%), Positives = 130/141 (92%)
 Frame = +1

Query: 1    GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180
            GVYGAFLLACYD+ N+E+QSICKIGTGFSEA+LEERS+SLR KVIP+ K+YYRF ET+NP
Sbjct: 634  GVYGAFLLACYDNDNEEFQSICKIGTGFSEAVLEERSSSLRSKVIPKPKAYYRFGETINP 693

Query: 181  DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360
            DVWFE +EVWEVKAADL+ISPVHRAA G+VDPNKGISLRFPRLLR+R DK PEQA+SS+Q
Sbjct: 694  DVWFEASEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLLRVRPDKAPEQASSSEQ 753

Query: 361  VAEMYRSQKIHQSNNQDEQED 423
            VAEMY++QK + +NNQ++ ED
Sbjct: 754  VAEMYKAQKHNHTNNQNDDED 774


>tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]
          Length = 909

 Score =  235 bits (600), Expect = 2e-60
 Identities = 109/141 (77%), Positives = 129/141 (91%)
 Frame = +1

Query: 1    GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180
            GV+G+FLLACYD+ N+EYQ+IC IGTGFSE  LEERSASLR KVI + K+YYRF +T+NP
Sbjct: 768  GVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKPKAYYRFGDTMNP 827

Query: 181  DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360
            DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLRLR+DK+PEQAT+SDQ
Sbjct: 828  DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRLRDDKSPEQATTSDQ 887

Query: 361  VAEMYRSQKIHQSNNQDEQED 423
            VA+MYRSQKI+   NQ++++D
Sbjct: 888  VADMYRSQKINHGYNQEDEDD 908


>ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea mays]
           gi|224032747|gb|ACN35449.1| unknown [Zea mays]
          Length = 452

 Score =  235 bits (600), Expect = 2e-60
 Identities = 109/141 (77%), Positives = 129/141 (91%)
 Frame = +1

Query: 1   GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180
           GV+G+FLLACYD+ N+EYQ+IC IGTGFSE  LEERSASLR KVI + K+YYRF +T+NP
Sbjct: 311 GVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKPKAYYRFGDTMNP 370

Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360
           DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLRLR+DK+PEQAT+SDQ
Sbjct: 371 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRLRDDKSPEQATTSDQ 430

Query: 361 VAEMYRSQKIHQSNNQDEQED 423
           VA+MYRSQKI+   NQ++++D
Sbjct: 431 VADMYRSQKINHGYNQEDEDD 451


>gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
            gi|31432783|gb|AAP54376.1| DNA ligase, putative,
            expressed [Oryza sativa Japonica Group]
            gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza
            sativa Japonica Group]
          Length = 810

 Score =  234 bits (597), Expect = 5e-60
 Identities = 107/141 (75%), Positives = 128/141 (90%)
 Frame = +1

Query: 1    GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180
            GVYG+FLLACYD+ N+EYQ+IC IGTGFSE  LEERS SLR K IP+ K+YYRFA+T++P
Sbjct: 668  GVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTMDP 727

Query: 181  DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360
            DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLR+R+DK PEQAT+S+Q
Sbjct: 728  DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEQATTSEQ 787

Query: 361  VAEMYRSQKIHQSNNQDEQED 423
            VA+MYR+QKI+ +NN ++ ED
Sbjct: 788  VADMYRAQKIYHANNNNDDED 808


>gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
           gi|222613048|gb|EEE51180.1| hypothetical protein
           OsJ_31972 [Oryza sativa Japonica Group]
          Length = 627

 Score =  234 bits (597), Expect = 5e-60
 Identities = 107/141 (75%), Positives = 128/141 (90%)
 Frame = +1

Query: 1   GVYGAFLLACYDDHNDEYQSICKIGTGFSEAMLEERSASLRPKVIPQAKSYYRFAETVNP 180
           GVYG+FLLACYD+ N+EYQ+IC IGTGFSE  LEERS SLR K IP+ K+YYRFA+T++P
Sbjct: 485 GVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTMDP 544

Query: 181 DVWFEPTEVWEVKAADLSISPVHRAATGVVDPNKGISLRFPRLLRLREDKTPEQATSSDQ 360
           DVWFEP+EVWEVKAADLSISPVHRAA G+VDPNKGISLRFPRLLR+R+DK PEQAT+S+Q
Sbjct: 545 DVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEQATTSEQ 604

Query: 361 VAEMYRSQKIHQSNNQDEQED 423
           VA+MYR+QKI+ +NN ++ ED
Sbjct: 605 VADMYRAQKIYHANNNNDDED 625