BLASTX nr result

ID: Coptis25_contig00000564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000564
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P31023.2|DLDH_PEA RecName: Full=Dihydrolipoyl dehydrogenase, ...   236   2e-60
pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine De...   236   2e-60
ref|XP_002263180.1| PREDICTED: dihydrolipoyl dehydrogenase, mito...   234   5e-60
ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ri...   233   9e-60
ref|XP_002894091.1| F21D18.28 [Arabidopsis lyrata subsp. lyrata]...   233   1e-59

>sp|P31023.2|DLDH_PEA RecName: Full=Dihydrolipoyl dehydrogenase, mitochondrial; AltName:
           Full=Dihydrolipoamide dehydrogenase; AltName:
           Full=Glycine cleavage system L protein; AltName:
           Full=Pyruvate dehydrogenase complex E3 subunit;
           Short=E3; Short=PDC-E3; Flags: Precursor
           gi|984678|emb|CAA44729.1| lipoamide dehydrogenase [Pisum
           sativum] gi|6723874|emb|CAA45066.2| dihydrolipoamide
           dehydrogenase [Pisum sativum]
          Length = 501

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/125 (91%), Positives = 122/125 (97%)
 Frame = +3

Query: 3   IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFASHGVKVSNVEVDLPAMLGQKDKA 182
           IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH+FA+HGVKVSNVE+DL AM+GQKDKA
Sbjct: 66  IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKA 125

Query: 183 VSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKPL 362
           VSNLTRGIEGLFKKNKVTYVKGYGKF+SPSE+SVDTIEG NTVVKGK+IIIATGSDVK L
Sbjct: 126 VSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 185

Query: 363 PGITI 377
           PG+TI
Sbjct: 186 PGVTI 190


>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
           From Pisum Sativum gi|9955322|pdb|1DXL|B Chain B,
           Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
           From Pisum Sativum gi|9955323|pdb|1DXL|C Chain C,
           Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
           From Pisum Sativum gi|9955324|pdb|1DXL|D Chain D,
           Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
           From Pisum Sativum
          Length = 470

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/125 (91%), Positives = 122/125 (97%)
 Frame = +3

Query: 3   IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFASHGVKVSNVEVDLPAMLGQKDKA 182
           IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH+FA+HGVKVSNVE+DL AM+GQKDKA
Sbjct: 35  IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKA 94

Query: 183 VSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKPL 362
           VSNLTRGIEGLFKKNKVTYVKGYGKF+SPSE+SVDTIEG NTVVKGK+IIIATGSDVK L
Sbjct: 95  VSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154

Query: 363 PGITI 377
           PG+TI
Sbjct: 155 PGVTI 159


>ref|XP_002263180.1| PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial [Vitis
           vinifera]
          Length = 502

 Score =  234 bits (597), Expect = 5e-60
 Identities = 115/125 (92%), Positives = 119/125 (95%)
 Frame = +3

Query: 3   IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFASHGVKVSNVEVDLPAMLGQKDKA 182
           IEKRG LGGTCLNVGCIPSKALLHSSHMYHEAKH+FASHGVK  +VEVDLPAM+GQKDKA
Sbjct: 67  IEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFASHGVKFPSVEVDLPAMMGQKDKA 126

Query: 183 VSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKPL 362
           V+NLTRGIEGLFKKNKV YVKGYGKFISPSEVSVDTIEGGN VVKGKNIIIATGSDVK L
Sbjct: 127 VANLTRGIEGLFKKNKVNYVKGYGKFISPSEVSVDTIEGGNAVVKGKNIIIATGSDVKSL 186

Query: 363 PGITI 377
           PGITI
Sbjct: 187 PGITI 191


>ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ricinus communis]
           gi|223541601|gb|EEF43150.1| dihydrolipoamide
           dehydrogenase, putative [Ricinus communis]
          Length = 510

 Score =  233 bits (595), Expect = 9e-60
 Identities = 113/125 (90%), Positives = 121/125 (96%)
 Frame = +3

Query: 3   IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFASHGVKVSNVEVDLPAMLGQKDKA 182
           IEKRG LGGTCLNVGCIPSKALLHSSHMYHEA+H+FA+HGVK S+VEVDLPAM+GQKDKA
Sbjct: 75  IEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAQHSFANHGVKFSSVEVDLPAMMGQKDKA 134

Query: 183 VSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKPL 362
           V+NLTRGIEGLFKKNKV YVKGYGKFISPSEVSVDT++GGNTVVKGKNIIIATGSDVK L
Sbjct: 135 VANLTRGIEGLFKKNKVNYVKGYGKFISPSEVSVDTLDGGNTVVKGKNIIIATGSDVKSL 194

Query: 363 PGITI 377
           PGITI
Sbjct: 195 PGITI 199


>ref|XP_002894091.1| F21D18.28 [Arabidopsis lyrata subsp. lyrata]
           gi|297339933|gb|EFH70350.1| F21D18.28 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 505

 Score =  233 bits (594), Expect = 1e-59
 Identities = 113/125 (90%), Positives = 121/125 (96%)
 Frame = +3

Query: 3   IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFASHGVKVSNVEVDLPAMLGQKDKA 182
           IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFA+HG+KVS+VEVDLPAML QKD A
Sbjct: 70  IEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHAFANHGIKVSSVEVDLPAMLAQKDNA 129

Query: 183 VSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKPL 362
           V NLTRGIEGLFKKNKVTYVKGYGKFISP+EVSV+TI+GGNTVVKGK+II+ATGSDVK L
Sbjct: 130 VKNLTRGIEGLFKKNKVTYVKGYGKFISPNEVSVETIDGGNTVVKGKHIIVATGSDVKSL 189

Query: 363 PGITI 377
           PGITI
Sbjct: 190 PGITI 194


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