BLASTX nr result

ID: Coptis25_contig00000534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000534
         (3005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   487   0.0  
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   450   0.0  
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   473   0.0  
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   483   0.0  
ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thalian...   416   0.0  

>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Glycine max]
          Length = 865

 Score =  487 bits (1253), Expect(2) = 0.0
 Identities = 261/496 (52%), Positives = 342/496 (68%), Gaps = 2/496 (0%)
 Frame = +3

Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
            VML SG Y+LVH+FF KM++SGEVPKALTYKVLV+ FW+EGKVNEAV+AVRDMERRGV+G
Sbjct: 368  VMLESGNYDLVHEFFGKMKRSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGVIG 427

Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
            TASVYYELACCLC NGRW+DA+LEV+ ++ L   KPLEV FTGMI S MDGGH+ DCI +
Sbjct: 428  TASVYYELACCLCNNGRWQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICI 487

Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
            FE M  HC PNIG IN MLKVYG+NDMF+KA+ +FE  K  +S F      G S + PD 
Sbjct: 488  FEYMKEHCVPNIGAINTMLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVPDV 547

Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
            ++Y+S+LEASA+AQQWEYFE+VY+EM + GYQLDQ+KH  LLV+AS+AGK+HLLEHAFDM
Sbjct: 548  YSYNSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAFDM 607

Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
            ILE GEIPH  FF E+V QA A+HNYERAVIL+N+MA+A ++V+EKQWT++F ES DRI 
Sbjct: 608  ILEAGEIPHHLFFFELVIQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDRIS 667

Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
             + L  L D L   ++V+E T++NL +SL  +CGL + ++ ++        S    +  I
Sbjct: 668  LENLERLLDALGNCDIVSELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSENSVNGLNEGI 727

Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSSICG 2543
              DG      K S    ++G + SKN+  V      P  +T + + D V   + S  +  
Sbjct: 728  DDDG---NVPKISRRMMIEG-VESKNDILVASYHTEP--ETIAFSRDQVNGGDNSDVMVF 781

Query: 2544 ISDNS-MDFGSTVPSGCVDCSSASPVLGVNSQDSIEETLDLLTSHVDGSSGP-DLPSASE 2717
               NS ++ G ++ +  ++C+  +  L  +S +  EE  D  +S  D   G  D PSA E
Sbjct: 782  RPQNSYIEDGKSLYADSLECTD-NLALDKSSDELDEELWDDGSSEDDDGEGVIDKPSAYE 840

Query: 2718 ILKRWRESRNKDGVFL 2765
            IL+ W+E R +DG  L
Sbjct: 841  ILEVWKEMREEDGNLL 856



 Score =  388 bits (996), Expect(2) = 0.0
 Identities = 203/364 (55%), Positives = 257/364 (70%), Gaps = 6/364 (1%)
 Frame = +2

Query: 119  FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPLTESQEQEISEQ 298
            F PN +KI++ L++KGV PTPKI+HTLRKKEIQK+NRK K   Q   PLT++Q Q  +E+
Sbjct: 16   FRPNTDKIRRRLIEKGVQPTPKIVHTLRKKEIQKHNRKLK--AQPAPPLTQAQAQAAAEE 73

Query: 299  AHFQTIKNEYRQVKKVLTSDKNENLMVGKPWERLEINGLKELGNRSKEY--GGEKLKGEY 472
             H +TIK E+R+V            M GKPWE ++     E   R +    GGEKL+ E 
Sbjct: 74   QHLETIKREFRRV------------MAGKPWEGIQKVEFLEKARRPERDCGGGEKLRRES 121

Query: 473  LVELSEILAKRNKH---WLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRLSG 640
            L EL E+   R      W+ D D+E  E W +   G +  K ++  E E I+FLV RLS 
Sbjct: 122  LTELKEMFEARKMDELKWVFDADLEIDEVWFDEGYGAR-GKTQKRSEVEVIRFLVHRLSD 180

Query: 641  TDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHKS 820
             +++M+DWKFS+MM+ SGLPFTE QLL IVE LG   CWK ALSVV+WVYN ++ +  +S
Sbjct: 181  KEITMKDWKFSRMMKMSGLPFTEGQLLRIVELLGFKRCWKQALSVVQWVYNYKDHRKFQS 240

Query: 821  RFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDVI 1000
            RFVYTKLL+VLGKA +  EALQIFN+MRE   IYPD+ AYHS++VTLGQAGL+KEL +++
Sbjct: 241  RFVYTKLLSVLGKAGRPNEALQIFNMMRESIHIYPDIAAYHSVAVTLGQAGLLKELLNIV 300

Query: 1001 ECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQP 1180
            ECMRQKP   +     K+WDP LEPDVV+YNAVLNACVPS+QWKGVSWV +Q+RKSGL+P
Sbjct: 301  ECMRQKPKAFMHR---KNWDPVLEPDVVIYNAVLNACVPSKQWKGVSWVFKQLRKSGLKP 357

Query: 1181 NGAT 1192
            NGAT
Sbjct: 358  NGAT 361


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  450 bits (1157), Expect(2) = 0.0
 Identities = 246/494 (49%), Positives = 329/494 (66%)
 Frame = +3

Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
            VML+SGKYE +H  F KM+K+G+  KA TY+VLV+AFWEEG VN A+EAVRDME+RGVVG
Sbjct: 387  VMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVG 446

Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
            +ASVYYELACCLC NG+W+DA++EVEK+K L   KPL V FTGMI S  +GGH+ DCIS+
Sbjct: 447  SASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISI 506

Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
            FE M   C+PNIGTIN MLKVYGRNDM++KA+++FE  KR     S+   S    L PD 
Sbjct: 507  FEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKAD--SSSHDSAVPSLVPDE 564

Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
            +TY+S+LEA+AS+ QWEYFE VY+EMAL GYQLDQ+KHA LLVEASKAGK +LL+HAFD 
Sbjct: 565  YTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDT 624

Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
            ILE G+IPHP  FTEM+ Q + + NYE+AV L+ +M +A +QVSE+QWT++F  + DRI 
Sbjct: 625  ILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNTDRIR 684

Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
            ++ L+ L   L   +  +EAT++NL +SLQS+C    P++ +   S+       D+    
Sbjct: 685  RNNLKQLLHALGDCD-ASEATVSNLSRSLQSLCKFDIPENTS--QSVACDHDATDELQ-- 739

Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSSICG 2543
            + D E+ E MK  P E  D +L           D+ PV   + N +   + ++ S     
Sbjct: 740  LPDSENMENMKLHPDE--DESL-----------DIIPVDHASLNMK-VNSESKMSPWSVS 785

Query: 2544 ISDNSMDFGSTVPSGCVDCSSASPVLGVNSQDSIEETLDLLTSHVDGSSGPDLPSASEIL 2723
            ISD ++  G     G  +  S   + G +  D  EE L+ L    D +   +LP+ +EIL
Sbjct: 786  ISDGALGTGQ-FSDGSNNVHSPFDLCGESEDD--EEELNTLLDEFDDAYDSNLPAVNEIL 842

Query: 2724 KRWRESRNKDGVFL 2765
            + W+E R  DG+FL
Sbjct: 843  ETWKEERKADGLFL 856



 Score =  423 bits (1087), Expect(2) = 0.0
 Identities = 213/366 (58%), Positives = 267/366 (72%), Gaps = 8/366 (2%)
 Frame = +2

Query: 119  FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEK----PLTESQEQE 286
            FEP+ +KIK+ LL+KGV+PTP+I+ +LRKKEIQKYNRK K+  + +     PL+ESQ+Q 
Sbjct: 15   FEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQL 74

Query: 287  ISEQAHFQTIKNEYRQVKKVLTSDKNENLMVGKPWERLEINGLKELGNRSKEYGGEKLKG 466
            I+E+ HF T+++EY++  K + +     LMVG+PWERLE    KEL      Y  + LK 
Sbjct: 75   IAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKK 134

Query: 467  EYLVELSEILAKRN---KHWLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRL 634
            E L EL ++   R      W LD+D+E  E W+ES   R    KR  G+ E I+FLV RL
Sbjct: 135  ESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRL 194

Query: 635  SGTDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHH 814
            S   +SMRDWKFS+MM +SGL F E QLL I++ LGA GCWK ALSVVEWVYNL+   H 
Sbjct: 195  SSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHS 254

Query: 815  KSRFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTD 994
            KSRFVYTKLLAVLG ARK  EALQIFNLMR D +IYPDM AYHSI+VTLGQAGL+K+L  
Sbjct: 255  KSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLK 314

Query: 995  VIECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGL 1174
            VIE MRQ+P+K++RN   K WDP +EPD+V+YNA+LNAC+P+ +WKGV WV  Q+RKSGL
Sbjct: 315  VIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGL 374

Query: 1175 QPNGAT 1192
            +PNGAT
Sbjct: 375  RPNGAT 380


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  473 bits (1218), Expect(2) = 0.0
 Identities = 256/499 (51%), Positives = 335/499 (67%), Gaps = 9/499 (1%)
 Frame = +3

Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
            VML+SG Y+LVH+ FEKM+++GEVP+ALTYKV+VR FW+EGKV+EAV+AVRDMERRGV+G
Sbjct: 390  VMLQSGNYDLVHELFEKMQRNGEVPEALTYKVMVRTFWKEGKVDEAVKAVRDMERRGVMG 449

Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
            TASVYYELACCLC  GRW+DA LEVEK+K+L   KPLEV FTGMI S MDGGH+ DCI +
Sbjct: 450  TASVYYELACCLCNCGRWQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICI 509

Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
            FE M +HC+PN+GT+N MLKVY +NDMF+ A+ +FE  K  +S            L PDA
Sbjct: 510  FEYMQDHCAPNVGTVNTMLKVYSQNDMFSTAKVLFEEVKVAKSD-----------LRPDA 558

Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
            +TY+ +LEAS+   QWEYFE+VYKEM L GY LDQNKH  LLV+AS+AGK+HLLEHAFDM
Sbjct: 559  YTYNLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDM 618

Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
            +LE GEIPH  FF E+V QA A+HNYERA+ILL++MAHA Y+V+EKQWT++F E+ DRI 
Sbjct: 619  VLEAGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTELFKENEDRIN 678

Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDS-HD 2360
             + L+ L D L   NVV+EATI+NL +SL  +CGL S +++   SS+   RS   D  ++
Sbjct: 679  HENLKRLLDDLGNCNVVSEATISNLSRSLHDLCGLGSSRNI---SSIIPFRSENVDCLNE 735

Query: 2361 IIMDGESFEQMKASPTEKVDGNLNSKN---NGGVVKSDVFPVYQTNSNAEDCVAMAERSS 2531
             I  GE+ +    S    ++G  +  +    G   + D+F       N +    +     
Sbjct: 736  TINGGENGKAPNFSGRMMIEGAESGNDILFGGDQAEPDMF-----TFNDDQVDRVNNNDV 790

Query: 2532 SICGISDNSMDFGSTVPSGCVDCSSASPVLGVN-SQDSIEETLDLLTSHVDGSSGP---- 2696
             +C   +  ++  S   S CVD       L ++ S D  E+ L    S+ D   G     
Sbjct: 791  VVCRPQNRVIEDKS---SFCVDRPEFLDRLTLDKSSDDSEDELSDDESYEDDDDGDKEVI 847

Query: 2697 DLPSASEILKRWRESRNKD 2753
            D PSA +IL+ W+E R +D
Sbjct: 848  DKPSAYQILEAWKEMREED 866



 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 197/365 (53%), Positives = 265/365 (72%), Gaps = 7/365 (1%)
 Frame = +2

Query: 119  FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPLTESQEQEISEQ 298
            F+P+ +KI+++L++KGV PTPKIIHTLRKK+IQK+NRK  +  Q   PL++SQ+Q + E+
Sbjct: 20   FQPDTDKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRKLNRQNQLNPPLSKSQKQTLEEE 79

Query: 299  AHFQTIKNEYRQVKKVLTSDKNEN---LMVGKPWERLEINGLKELGNRSKEYGGEKLKGE 469
             HFQ +K+EY+Q  + L  ++  N    ++GKPWE +E     E    + E+ GEKLK E
Sbjct: 80   QHFQELKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEHRGEKLKRE 139

Query: 470  YLVELSEILAKRNKH---WLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRLS 637
             L+EL E+  +R      W+ ++DIE  E W +     K  K  +  E + ++FLV RL 
Sbjct: 140  SLIELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKRSEVQVVRFLVDRLC 199

Query: 638  GTDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHK 817
              ++  +DWKFS++M+ SGL FTE QL+ I+E LG   CWK ALSVV+WVYN ++ +  +
Sbjct: 200  DKEIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQWVYNSKDHRKFQ 259

Query: 818  SRFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDV 997
            SRFVYTKLLAVLGKAR+  EALQIFN+M  + R+YPDM AYHSI+VTLGQAGL+KEL ++
Sbjct: 260  SRFVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLGQAGLLKELLNI 319

Query: 998  IECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQ 1177
            +ECMRQKP + ++    K+WDP LEPDVV+YNAVLNACVPS+QWKGVSWV +QMRKS L+
Sbjct: 320  VECMRQKP-ETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGVSWVFQQMRKSSLK 378

Query: 1178 PNGAT 1192
            PNGAT
Sbjct: 379  PNGAT 383


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  483 bits (1242), Expect(2) = 0.0
 Identities = 273/516 (52%), Positives = 336/516 (65%), Gaps = 11/516 (2%)
 Frame = +3

Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
            VML SGKY+LVH+ F KM +SGE PKALTYKVLVRAFWEEGKVNEA+EAVRDME RGVVG
Sbjct: 515  VMLNSGKYDLVHELFRKMNRSGEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVG 574

Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
            TAS+YYELACCLC  G W+DAMLEV+K+K LR +KPLEV FTG+IMS +DGGHV DCIS+
Sbjct: 575  TASLYYELACCLCYYGMWQDAMLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISI 634

Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
            FE M  +C PNIGTIN MLKVYGRND+F+KA+E+F   K         T + G++L PD 
Sbjct: 635  FEYMKAYCVPNIGTINIMLKVYGRNDLFSKAKELFGEIKG--------TNNDGTYLVPDE 686

Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
            FTYSS+LEASASA QWEYFE VYKEM   GYQLDQ KHA LLVEAS+ GK HLLEHAFD 
Sbjct: 687  FTYSSMLEASASALQWEYFELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDA 746

Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
             LE GEIPH   FTEMV QA+A+ NYERAV+L+N++A A +++SEKQW D+F ++ D+I 
Sbjct: 747  ALEAGEIPHHLLFTEMVFQATAQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKIT 806

Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
            +DGL  L D L  S+V +E T+ NL ++L S+CG    + L+  +SL +     D ++  
Sbjct: 807  QDGLEKLLDALRSSDVASEPTVANLSRTLHSLCGRGRSEYLSGSTSLGI-----DVTNSS 861

Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSS--- 2534
             +D  S + M     E  +  L  K +  +   D+  V ++N+  E      E SSS   
Sbjct: 862  YLDSGSRKIMGDKGPEMHEDTLIDKTD--IAYGDL-SVTRSNTGGEGSDDTDEASSSPRN 918

Query: 2535 -------ICGISDNSMDFGSTVPSGC-VDCSSASPVLGVNSQDSIEETLDLLTSHVDGSS 2690
                   I  I  N   FG    SG   DC            D  E    +  + VD S 
Sbjct: 919  YSTDRDGIASICTNVKIFGDDEASGASTDC-----------LDFDEMEYGIPINQVDDSC 967

Query: 2691 GPDLPSASEILKRWRESRNKDGVFLPFK*SPSEDKS 2798
            G  LPSA EIL  W+ESR K  +F PF+   +E  S
Sbjct: 968  GTKLPSADEILDIWKESR-KGRLFFPFQLHKNEPTS 1002



 Score =  344 bits (882), Expect(2) = 0.0
 Identities = 179/335 (53%), Positives = 238/335 (71%), Gaps = 7/335 (2%)
 Frame = +2

Query: 209  EIQKYNRKTKKTTQHEKPLTESQEQEISEQAHFQTIKNEYRQVKKVL---TSDKNENLMV 379
            +IQK+NRK  K +Q +  LT SQ+Q ++E++HFQT+ +EYR   K +   T      L+V
Sbjct: 177  QIQKHNRKITKVSQAQ--LTASQKQALAEESHFQTLTSEYRTFTKAIKGETRSSTSGLLV 234

Query: 380  GKPWERLEINGLKELGNRSKEYGGEKLKGEYLVELSEILAKRNKHWLLDEDIEA---GEW 550
            G+PWER+E   L+E+ + S ++ G KL  E L EL E   +   +W+LD DIE     +W
Sbjct: 235  GRPWERIERVKLREIVSGSNQFNGNKLNVESLRELKENF-EDGLNWVLDNDIELENNDDW 293

Query: 551  MESREGRKLSK-KREVGEAETIQFLVKRLSGTDLSMRDWKFSKMMQQSGLPFTERQLLSI 727
            + S    +    KR   + E I+FLV RLS  D+++RDWK +K+M+QSGL F+E QL+ I
Sbjct: 294  LSSENQWQYDPAKRRRNDKEEIRFLVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKI 353

Query: 728  VEGLGAVGCWKHALSVVEWVYNLEEFKHHKSRFVYTKLLAVLGKARKHAEALQIFNLMRE 907
            VEGLG  G W+ A++VVEWVYN +E +  KSRFVYTKLL+VL   R+  EAL+IFN MRE
Sbjct: 354  VEGLGNKGKWEQAMAVVEWVYNDKERRDSKSRFVYTKLLSVLRIERRPKEALRIFNSMRE 413

Query: 908  DCRIYPDMPAYHSISVTLGQAGLVKELTDVIECMRQKPTKRIRNTRSKDWDPCLEPDVVV 1087
            D  +YPDM AYH I+VTLGQAG +KEL  ++ECM+Q+P+KRI     K WDP LEPD+V+
Sbjct: 414  DHNLYPDMAAYHVIAVTLGQAGNLKELLKIVECMKQQPSKRINKMCYKRWDPVLEPDIVI 473

Query: 1088 YNAVLNACVPSRQWKGVSWVMEQMRKSGLQPNGAT 1192
            YNAVLNACVP++QWKGV+WV EQ+RKSGL+PNGAT
Sbjct: 474  YNAVLNACVPTQQWKGVAWVFEQLRKSGLKPNGAT 508


>ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
            gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g67570, chloroplastic; AltName: Full=Protein DELAYED
            GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
            Flags: Precursor gi|332010978|gb|AED98361.1| delayed
            greening 1 protein [Arabidopsis thaliana]
          Length = 798

 Score =  416 bits (1069), Expect(2) = 0.0
 Identities = 199/369 (53%), Positives = 270/369 (73%), Gaps = 1/369 (0%)
 Frame = +3

Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
            VML SGK++ VH FF KM+ SGE PKA+TYKVLVRA W EGK+ EAVEAVRDME++GV+G
Sbjct: 385  VMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIG 444

Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
            T SVYYELACCLC NGRW DAMLEV ++K+L   +PLE+ FTG+I + ++GGHV DC+++
Sbjct: 445  TGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAI 504

Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
            F+ M + C PNIGT N MLKVYGRNDMF++A+E+FE           +     + L P+ 
Sbjct: 505  FQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHLVPNE 554

Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
            +TYS +LEASA + QWEYFE+VY+ M L GYQ+DQ KHA +L+EAS+AGK  LLEHAFD 
Sbjct: 555  YTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDA 614

Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
            +LE+GEIPHP FFTE++C A+A+ +++RA+ L+N++A AS+Q+SE++WTD+F E +D + 
Sbjct: 615  VLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQDWLT 674

Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGD-DSHD 2360
            +D L  L D L   + V+E T++NL KSL+S CG SS       +     +S G+    D
Sbjct: 675  QDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRCGSSSSSAQPLLAVDVTTQSQGEKPEED 734

Query: 2361 IIMDGESFE 2387
            +++   + E
Sbjct: 735  LLLQDTTME 743



 Score =  376 bits (965), Expect(2) = 0.0
 Identities = 200/363 (55%), Positives = 262/363 (72%), Gaps = 5/363 (1%)
 Frame = +2

Query: 119  FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPL-TESQEQEISE 295
            FEP+ EKIK+ LLK GV PTPKI++ LRKKEIQK+NR+TK+ T+ E  + TE+Q+Q + E
Sbjct: 19   FEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEE 78

Query: 296  QAHFQTIKNEYRQVKKVLTSDKNEN--LMVGKPWERLEINGLKEL--GNRSKEYGGEKLK 463
            +A FQT++ EY+Q  + ++  +  +  LMVG PWE +E   LKEL  G R +E    +LK
Sbjct: 79   EARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSAGELK 138

Query: 464  GEYLVELSEILAKRNKHWLLDEDIEAGEWMESREGRKLSKKREVGEAETIQFLVKRLSGT 643
             E L EL +IL K +  W+LD+D++  E+   +E     + R  GEA  ++ LV RLSG 
Sbjct: 139  KENLKELKKILEK-DLRWVLDDDVDVEEFDLDKEFDPAKRWRNEGEA--VRVLVDRLSGR 195

Query: 644  DLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHKSR 823
            +++ + WKF +MM QSGL FTE Q+L IV+ LG    WK A +VV WVY+ ++ KH +SR
Sbjct: 196  EINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSR 255

Query: 824  FVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDVIE 1003
            FVYTKLL+VLG AR+  EALQIFN M  D ++YPDM AYH I+VTLGQAGL+KEL  VIE
Sbjct: 256  FVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIE 315

Query: 1004 CMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQPN 1183
             MRQKPTK  +N R K+WDP LEPD+VVYNA+LNACVP+ QWK VSWV  ++RK+GL+PN
Sbjct: 316  RMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPN 375

Query: 1184 GAT 1192
            GAT
Sbjct: 376  GAT 378


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