BLASTX nr result
ID: Coptis25_contig00000534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000534
(3005 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi... 487 0.0
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi... 450 0.0
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ... 473 0.0
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu... 483 0.0
ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thalian... 416 0.0
>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Glycine max]
Length = 865
Score = 487 bits (1253), Expect(2) = 0.0
Identities = 261/496 (52%), Positives = 342/496 (68%), Gaps = 2/496 (0%)
Frame = +3
Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
VML SG Y+LVH+FF KM++SGEVPKALTYKVLV+ FW+EGKVNEAV+AVRDMERRGV+G
Sbjct: 368 VMLESGNYDLVHEFFGKMKRSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGVIG 427
Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
TASVYYELACCLC NGRW+DA+LEV+ ++ L KPLEV FTGMI S MDGGH+ DCI +
Sbjct: 428 TASVYYELACCLCNNGRWQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICI 487
Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
FE M HC PNIG IN MLKVYG+NDMF+KA+ +FE K +S F G S + PD
Sbjct: 488 FEYMKEHCVPNIGAINTMLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVPDV 547
Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
++Y+S+LEASA+AQQWEYFE+VY+EM + GYQLDQ+KH LLV+AS+AGK+HLLEHAFDM
Sbjct: 548 YSYNSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAFDM 607
Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
ILE GEIPH FF E+V QA A+HNYERAVIL+N+MA+A ++V+EKQWT++F ES DRI
Sbjct: 608 ILEAGEIPHHLFFFELVIQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDRIS 667
Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
+ L L D L ++V+E T++NL +SL +CGL + ++ ++ S + I
Sbjct: 668 LENLERLLDALGNCDIVSELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSENSVNGLNEGI 727
Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSSICG 2543
DG K S ++G + SKN+ V P +T + + D V + S +
Sbjct: 728 DDDG---NVPKISRRMMIEG-VESKNDILVASYHTEP--ETIAFSRDQVNGGDNSDVMVF 781
Query: 2544 ISDNS-MDFGSTVPSGCVDCSSASPVLGVNSQDSIEETLDLLTSHVDGSSGP-DLPSASE 2717
NS ++ G ++ + ++C+ + L +S + EE D +S D G D PSA E
Sbjct: 782 RPQNSYIEDGKSLYADSLECTD-NLALDKSSDELDEELWDDGSSEDDDGEGVIDKPSAYE 840
Query: 2718 ILKRWRESRNKDGVFL 2765
IL+ W+E R +DG L
Sbjct: 841 ILEVWKEMREEDGNLL 856
Score = 388 bits (996), Expect(2) = 0.0
Identities = 203/364 (55%), Positives = 257/364 (70%), Gaps = 6/364 (1%)
Frame = +2
Query: 119 FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPLTESQEQEISEQ 298
F PN +KI++ L++KGV PTPKI+HTLRKKEIQK+NRK K Q PLT++Q Q +E+
Sbjct: 16 FRPNTDKIRRRLIEKGVQPTPKIVHTLRKKEIQKHNRKLK--AQPAPPLTQAQAQAAAEE 73
Query: 299 AHFQTIKNEYRQVKKVLTSDKNENLMVGKPWERLEINGLKELGNRSKEY--GGEKLKGEY 472
H +TIK E+R+V M GKPWE ++ E R + GGEKL+ E
Sbjct: 74 QHLETIKREFRRV------------MAGKPWEGIQKVEFLEKARRPERDCGGGEKLRRES 121
Query: 473 LVELSEILAKRNKH---WLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRLSG 640
L EL E+ R W+ D D+E E W + G + K ++ E E I+FLV RLS
Sbjct: 122 LTELKEMFEARKMDELKWVFDADLEIDEVWFDEGYGAR-GKTQKRSEVEVIRFLVHRLSD 180
Query: 641 TDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHKS 820
+++M+DWKFS+MM+ SGLPFTE QLL IVE LG CWK ALSVV+WVYN ++ + +S
Sbjct: 181 KEITMKDWKFSRMMKMSGLPFTEGQLLRIVELLGFKRCWKQALSVVQWVYNYKDHRKFQS 240
Query: 821 RFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDVI 1000
RFVYTKLL+VLGKA + EALQIFN+MRE IYPD+ AYHS++VTLGQAGL+KEL +++
Sbjct: 241 RFVYTKLLSVLGKAGRPNEALQIFNMMRESIHIYPDIAAYHSVAVTLGQAGLLKELLNIV 300
Query: 1001 ECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQP 1180
ECMRQKP + K+WDP LEPDVV+YNAVLNACVPS+QWKGVSWV +Q+RKSGL+P
Sbjct: 301 ECMRQKPKAFMHR---KNWDPVLEPDVVIYNAVLNACVPSKQWKGVSWVFKQLRKSGLKP 357
Query: 1181 NGAT 1192
NGAT
Sbjct: 358 NGAT 361
>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
gi|449499902|ref|XP_004160949.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
Length = 860
Score = 450 bits (1157), Expect(2) = 0.0
Identities = 246/494 (49%), Positives = 329/494 (66%)
Frame = +3
Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
VML+SGKYE +H F KM+K+G+ KA TY+VLV+AFWEEG VN A+EAVRDME+RGVVG
Sbjct: 387 VMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVG 446
Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
+ASVYYELACCLC NG+W+DA++EVEK+K L KPL V FTGMI S +GGH+ DCIS+
Sbjct: 447 SASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISI 506
Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
FE M C+PNIGTIN MLKVYGRNDM++KA+++FE KR S+ S L PD
Sbjct: 507 FEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKAD--SSSHDSAVPSLVPDE 564
Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
+TY+S+LEA+AS+ QWEYFE VY+EMAL GYQLDQ+KHA LLVEASKAGK +LL+HAFD
Sbjct: 565 YTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDT 624
Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
ILE G+IPHP FTEM+ Q + + NYE+AV L+ +M +A +QVSE+QWT++F + DRI
Sbjct: 625 ILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNTDRIR 684
Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
++ L+ L L + +EAT++NL +SLQS+C P++ + S+ D+
Sbjct: 685 RNNLKQLLHALGDCD-ASEATVSNLSRSLQSLCKFDIPENTS--QSVACDHDATDELQ-- 739
Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSSICG 2543
+ D E+ E MK P E D +L D+ PV + N + + ++ S
Sbjct: 740 LPDSENMENMKLHPDE--DESL-----------DIIPVDHASLNMK-VNSESKMSPWSVS 785
Query: 2544 ISDNSMDFGSTVPSGCVDCSSASPVLGVNSQDSIEETLDLLTSHVDGSSGPDLPSASEIL 2723
ISD ++ G G + S + G + D EE L+ L D + +LP+ +EIL
Sbjct: 786 ISDGALGTGQ-FSDGSNNVHSPFDLCGESEDD--EEELNTLLDEFDDAYDSNLPAVNEIL 842
Query: 2724 KRWRESRNKDGVFL 2765
+ W+E R DG+FL
Sbjct: 843 ETWKEERKADGLFL 856
Score = 423 bits (1087), Expect(2) = 0.0
Identities = 213/366 (58%), Positives = 267/366 (72%), Gaps = 8/366 (2%)
Frame = +2
Query: 119 FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEK----PLTESQEQE 286
FEP+ +KIK+ LL+KGV+PTP+I+ +LRKKEIQKYNRK K+ + + PL+ESQ+Q
Sbjct: 15 FEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQL 74
Query: 287 ISEQAHFQTIKNEYRQVKKVLTSDKNENLMVGKPWERLEINGLKELGNRSKEYGGEKLKG 466
I+E+ HF T+++EY++ K + + LMVG+PWERLE KEL Y + LK
Sbjct: 75 IAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKK 134
Query: 467 EYLVELSEILAKRN---KHWLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRL 634
E L EL ++ R W LD+D+E E W+ES R KR G+ E I+FLV RL
Sbjct: 135 ESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRL 194
Query: 635 SGTDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHH 814
S +SMRDWKFS+MM +SGL F E QLL I++ LGA GCWK ALSVVEWVYNL+ H
Sbjct: 195 SSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHS 254
Query: 815 KSRFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTD 994
KSRFVYTKLLAVLG ARK EALQIFNLMR D +IYPDM AYHSI+VTLGQAGL+K+L
Sbjct: 255 KSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLK 314
Query: 995 VIECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGL 1174
VIE MRQ+P+K++RN K WDP +EPD+V+YNA+LNAC+P+ +WKGV WV Q+RKSGL
Sbjct: 315 VIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGL 374
Query: 1175 QPNGAT 1192
+PNGAT
Sbjct: 375 RPNGAT 380
>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509586|gb|AES90728.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 877
Score = 473 bits (1218), Expect(2) = 0.0
Identities = 256/499 (51%), Positives = 335/499 (67%), Gaps = 9/499 (1%)
Frame = +3
Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
VML+SG Y+LVH+ FEKM+++GEVP+ALTYKV+VR FW+EGKV+EAV+AVRDMERRGV+G
Sbjct: 390 VMLQSGNYDLVHELFEKMQRNGEVPEALTYKVMVRTFWKEGKVDEAVKAVRDMERRGVMG 449
Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
TASVYYELACCLC GRW+DA LEVEK+K+L KPLEV FTGMI S MDGGH+ DCI +
Sbjct: 450 TASVYYELACCLCNCGRWQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICI 509
Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
FE M +HC+PN+GT+N MLKVY +NDMF+ A+ +FE K +S L PDA
Sbjct: 510 FEYMQDHCAPNVGTVNTMLKVYSQNDMFSTAKVLFEEVKVAKSD-----------LRPDA 558
Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
+TY+ +LEAS+ QWEYFE+VYKEM L GY LDQNKH LLV+AS+AGK+HLLEHAFDM
Sbjct: 559 YTYNLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDM 618
Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
+LE GEIPH FF E+V QA A+HNYERA+ILL++MAHA Y+V+EKQWT++F E+ DRI
Sbjct: 619 VLEAGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTELFKENEDRIN 678
Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDS-HD 2360
+ L+ L D L NVV+EATI+NL +SL +CGL S +++ SS+ RS D ++
Sbjct: 679 HENLKRLLDDLGNCNVVSEATISNLSRSLHDLCGLGSSRNI---SSIIPFRSENVDCLNE 735
Query: 2361 IIMDGESFEQMKASPTEKVDGNLNSKN---NGGVVKSDVFPVYQTNSNAEDCVAMAERSS 2531
I GE+ + S ++G + + G + D+F N + +
Sbjct: 736 TINGGENGKAPNFSGRMMIEGAESGNDILFGGDQAEPDMF-----TFNDDQVDRVNNNDV 790
Query: 2532 SICGISDNSMDFGSTVPSGCVDCSSASPVLGVN-SQDSIEETLDLLTSHVDGSSGP---- 2696
+C + ++ S S CVD L ++ S D E+ L S+ D G
Sbjct: 791 VVCRPQNRVIEDKS---SFCVDRPEFLDRLTLDKSSDDSEDELSDDESYEDDDDGDKEVI 847
Query: 2697 DLPSASEILKRWRESRNKD 2753
D PSA +IL+ W+E R +D
Sbjct: 848 DKPSAYQILEAWKEMREED 866
Score = 397 bits (1021), Expect(2) = 0.0
Identities = 197/365 (53%), Positives = 265/365 (72%), Gaps = 7/365 (1%)
Frame = +2
Query: 119 FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPLTESQEQEISEQ 298
F+P+ +KI+++L++KGV PTPKIIHTLRKK+IQK+NRK + Q PL++SQ+Q + E+
Sbjct: 20 FQPDTDKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRKLNRQNQLNPPLSKSQKQTLEEE 79
Query: 299 AHFQTIKNEYRQVKKVLTSDKNEN---LMVGKPWERLEINGLKELGNRSKEYGGEKLKGE 469
HFQ +K+EY+Q + L ++ N ++GKPWE +E E + E+ GEKLK E
Sbjct: 80 QHFQELKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEHRGEKLKRE 139
Query: 470 YLVELSEILAKRNKH---WLLDEDIEAGE-WMESREGRKLSKKREVGEAETIQFLVKRLS 637
L+EL E+ +R W+ ++DIE E W + K K + E + ++FLV RL
Sbjct: 140 SLIELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKRSEVQVVRFLVDRLC 199
Query: 638 GTDLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHK 817
++ +DWKFS++M+ SGL FTE QL+ I+E LG CWK ALSVV+WVYN ++ + +
Sbjct: 200 DKEIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQWVYNSKDHRKFQ 259
Query: 818 SRFVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDV 997
SRFVYTKLLAVLGKAR+ EALQIFN+M + R+YPDM AYHSI+VTLGQAGL+KEL ++
Sbjct: 260 SRFVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLGQAGLLKELLNI 319
Query: 998 IECMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQ 1177
+ECMRQKP + ++ K+WDP LEPDVV+YNAVLNACVPS+QWKGVSWV +QMRKS L+
Sbjct: 320 VECMRQKP-ETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGVSWVFQQMRKSSLK 378
Query: 1178 PNGAT 1192
PNGAT
Sbjct: 379 PNGAT 383
>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
gi|223535436|gb|EEF37106.1| GTP binding protein, putative
[Ricinus communis]
Length = 1010
Score = 483 bits (1242), Expect(2) = 0.0
Identities = 273/516 (52%), Positives = 336/516 (65%), Gaps = 11/516 (2%)
Frame = +3
Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
VML SGKY+LVH+ F KM +SGE PKALTYKVLVRAFWEEGKVNEA+EAVRDME RGVVG
Sbjct: 515 VMLNSGKYDLVHELFRKMNRSGEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVG 574
Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
TAS+YYELACCLC G W+DAMLEV+K+K LR +KPLEV FTG+IMS +DGGHV DCIS+
Sbjct: 575 TASLYYELACCLCYYGMWQDAMLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISI 634
Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
FE M +C PNIGTIN MLKVYGRND+F+KA+E+F K T + G++L PD
Sbjct: 635 FEYMKAYCVPNIGTINIMLKVYGRNDLFSKAKELFGEIKG--------TNNDGTYLVPDE 686
Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
FTYSS+LEASASA QWEYFE VYKEM GYQLDQ KHA LLVEAS+ GK HLLEHAFD
Sbjct: 687 FTYSSMLEASASALQWEYFELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDA 746
Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
LE GEIPH FTEMV QA+A+ NYERAV+L+N++A A +++SEKQW D+F ++ D+I
Sbjct: 747 ALEAGEIPHHLLFTEMVFQATAQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKIT 806
Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGDDSHDI 2363
+DGL L D L S+V +E T+ NL ++L S+CG + L+ +SL + D ++
Sbjct: 807 QDGLEKLLDALRSSDVASEPTVANLSRTLHSLCGRGRSEYLSGSTSLGI-----DVTNSS 861
Query: 2364 IMDGESFEQMKASPTEKVDGNLNSKNNGGVVKSDVFPVYQTNSNAEDCVAMAERSSS--- 2534
+D S + M E + L K + + D+ V ++N+ E E SSS
Sbjct: 862 YLDSGSRKIMGDKGPEMHEDTLIDKTD--IAYGDL-SVTRSNTGGEGSDDTDEASSSPRN 918
Query: 2535 -------ICGISDNSMDFGSTVPSGC-VDCSSASPVLGVNSQDSIEETLDLLTSHVDGSS 2690
I I N FG SG DC D E + + VD S
Sbjct: 919 YSTDRDGIASICTNVKIFGDDEASGASTDC-----------LDFDEMEYGIPINQVDDSC 967
Query: 2691 GPDLPSASEILKRWRESRNKDGVFLPFK*SPSEDKS 2798
G LPSA EIL W+ESR K +F PF+ +E S
Sbjct: 968 GTKLPSADEILDIWKESR-KGRLFFPFQLHKNEPTS 1002
Score = 344 bits (882), Expect(2) = 0.0
Identities = 179/335 (53%), Positives = 238/335 (71%), Gaps = 7/335 (2%)
Frame = +2
Query: 209 EIQKYNRKTKKTTQHEKPLTESQEQEISEQAHFQTIKNEYRQVKKVL---TSDKNENLMV 379
+IQK+NRK K +Q + LT SQ+Q ++E++HFQT+ +EYR K + T L+V
Sbjct: 177 QIQKHNRKITKVSQAQ--LTASQKQALAEESHFQTLTSEYRTFTKAIKGETRSSTSGLLV 234
Query: 380 GKPWERLEINGLKELGNRSKEYGGEKLKGEYLVELSEILAKRNKHWLLDEDIEA---GEW 550
G+PWER+E L+E+ + S ++ G KL E L EL E + +W+LD DIE +W
Sbjct: 235 GRPWERIERVKLREIVSGSNQFNGNKLNVESLRELKENF-EDGLNWVLDNDIELENNDDW 293
Query: 551 MESREGRKLSK-KREVGEAETIQFLVKRLSGTDLSMRDWKFSKMMQQSGLPFTERQLLSI 727
+ S + KR + E I+FLV RLS D+++RDWK +K+M+QSGL F+E QL+ I
Sbjct: 294 LSSENQWQYDPAKRRRNDKEEIRFLVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKI 353
Query: 728 VEGLGAVGCWKHALSVVEWVYNLEEFKHHKSRFVYTKLLAVLGKARKHAEALQIFNLMRE 907
VEGLG G W+ A++VVEWVYN +E + KSRFVYTKLL+VL R+ EAL+IFN MRE
Sbjct: 354 VEGLGNKGKWEQAMAVVEWVYNDKERRDSKSRFVYTKLLSVLRIERRPKEALRIFNSMRE 413
Query: 908 DCRIYPDMPAYHSISVTLGQAGLVKELTDVIECMRQKPTKRIRNTRSKDWDPCLEPDVVV 1087
D +YPDM AYH I+VTLGQAG +KEL ++ECM+Q+P+KRI K WDP LEPD+V+
Sbjct: 414 DHNLYPDMAAYHVIAVTLGQAGNLKELLKIVECMKQQPSKRINKMCYKRWDPVLEPDIVI 473
Query: 1088 YNAVLNACVPSRQWKGVSWVMEQMRKSGLQPNGAT 1192
YNAVLNACVP++QWKGV+WV EQ+RKSGL+PNGAT
Sbjct: 474 YNAVLNACVPTQQWKGVAWVFEQLRKSGLKPNGAT 508
>ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g67570, chloroplastic; AltName: Full=Protein DELAYED
GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
Flags: Precursor gi|332010978|gb|AED98361.1| delayed
greening 1 protein [Arabidopsis thaliana]
Length = 798
Score = 416 bits (1069), Expect(2) = 0.0
Identities = 199/369 (53%), Positives = 270/369 (73%), Gaps = 1/369 (0%)
Frame = +3
Query: 1284 VMLRSGKYELVHKFFEKMRKSGEVPKALTYKVLVRAFWEEGKVNEAVEAVRDMERRGVVG 1463
VML SGK++ VH FF KM+ SGE PKA+TYKVLVRA W EGK+ EAVEAVRDME++GV+G
Sbjct: 385 VMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIG 444
Query: 1464 TASVYYELACCLCRNGRWKDAMLEVEKLKKLRLTKPLEVAFTGMIMSCMDGGHVGDCISV 1643
T SVYYELACCLC NGRW DAMLEV ++K+L +PLE+ FTG+I + ++GGHV DC+++
Sbjct: 445 TGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAI 504
Query: 1644 FEQMDNHCSPNIGTINAMLKVYGRNDMFAKAQEMFERTKRMESGFSTVTCSGGSFLTPDA 1823
F+ M + C PNIGT N MLKVYGRNDMF++A+E+FE + + L P+
Sbjct: 505 FQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHLVPNE 554
Query: 1824 FTYSSILEASASAQQWEYFEYVYKEMALGGYQLDQNKHAWLLVEASKAGKIHLLEHAFDM 2003
+TYS +LEASA + QWEYFE+VY+ M L GYQ+DQ KHA +L+EAS+AGK LLEHAFD
Sbjct: 555 YTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDA 614
Query: 2004 ILEEGEIPHPTFFTEMVCQASAEHNYERAVILLNSMAHASYQVSEKQWTDIFMESRDRIG 2183
+LE+GEIPHP FFTE++C A+A+ +++RA+ L+N++A AS+Q+SE++WTD+F E +D +
Sbjct: 615 VLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQDWLT 674
Query: 2184 KDGLRHLFDKLCRSNVVTEATITNLLKSLQSICGLSSPKDLTAFSSLTVIRSPGD-DSHD 2360
+D L L D L + V+E T++NL KSL+S CG SS + +S G+ D
Sbjct: 675 QDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRCGSSSSSAQPLLAVDVTTQSQGEKPEED 734
Query: 2361 IIMDGESFE 2387
+++ + E
Sbjct: 735 LLLQDTTME 743
Score = 376 bits (965), Expect(2) = 0.0
Identities = 200/363 (55%), Positives = 262/363 (72%), Gaps = 5/363 (1%)
Frame = +2
Query: 119 FEPNAEKIKQNLLKKGVFPTPKIIHTLRKKEIQKYNRKTKKTTQHEKPL-TESQEQEISE 295
FEP+ EKIK+ LLK GV PTPKI++ LRKKEIQK+NR+TK+ T+ E + TE+Q+Q + E
Sbjct: 19 FEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEE 78
Query: 296 QAHFQTIKNEYRQVKKVLTSDKNEN--LMVGKPWERLEINGLKEL--GNRSKEYGGEKLK 463
+A FQT++ EY+Q + ++ + + LMVG PWE +E LKEL G R +E +LK
Sbjct: 79 EARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSAGELK 138
Query: 464 GEYLVELSEILAKRNKHWLLDEDIEAGEWMESREGRKLSKKREVGEAETIQFLVKRLSGT 643
E L EL +IL K + W+LD+D++ E+ +E + R GEA ++ LV RLSG
Sbjct: 139 KENLKELKKILEK-DLRWVLDDDVDVEEFDLDKEFDPAKRWRNEGEA--VRVLVDRLSGR 195
Query: 644 DLSMRDWKFSKMMQQSGLPFTERQLLSIVEGLGAVGCWKHALSVVEWVYNLEEFKHHKSR 823
+++ + WKF +MM QSGL FTE Q+L IV+ LG WK A +VV WVY+ ++ KH +SR
Sbjct: 196 EINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSR 255
Query: 824 FVYTKLLAVLGKARKHAEALQIFNLMREDCRIYPDMPAYHSISVTLGQAGLVKELTDVIE 1003
FVYTKLL+VLG AR+ EALQIFN M D ++YPDM AYH I+VTLGQAGL+KEL VIE
Sbjct: 256 FVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIE 315
Query: 1004 CMRQKPTKRIRNTRSKDWDPCLEPDVVVYNAVLNACVPSRQWKGVSWVMEQMRKSGLQPN 1183
MRQKPTK +N R K+WDP LEPD+VVYNA+LNACVP+ QWK VSWV ++RK+GL+PN
Sbjct: 316 RMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPN 375
Query: 1184 GAT 1192
GAT
Sbjct: 376 GAT 378