BLASTX nr result
ID: Coptis25_contig00000523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000523 (1498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|2... 226 1e-56 ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255... 218 3e-54 ref|XP_002313211.1| predicted protein [Populus trichocarpa] gi|2... 214 6e-53 ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254... 213 8e-53 gb|ACJ54183.1| PB1 domain-containing protein [Nicotiana benthami... 211 3e-52 >ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|222846065|gb|EEE83612.1| predicted protein [Populus trichocarpa] Length = 479 Score = 226 bits (576), Expect = 1e-56 Identities = 170/459 (37%), Positives = 211/459 (45%), Gaps = 18/459 (3%) Frame = +2 Query: 95 MENYPYTSSYPDSHDSSPRSESWD-----DXXXXXXXSSNYKVKFMCSYGGKILPRPHDN 259 MEN +SYPDS DSSPRS D S NYKVKFMCSYGGKI PRPHDN Sbjct: 1 MENNYSFNSYPDSGDSSPRSREIDFDNPTPWEEQSQQSQNYKVKFMCSYGGKIHPRPHDN 60 Query: 260 QLSYVGGDTKILSMDRNVKFSNIISKLSTLCSDSDICFKYQLPGEDLDALISVTNDEDLE 439 QLSY+GG+TKIL++DRN+KF +ISKLS LC D+D+ FKYQLPGEDLDALISVTND+DLE Sbjct: 61 QLSYMGGETKILAVDRNLKFPVMISKLSALCGDTDVAFKYQLPGEDLDALISVTNDDDLE 120 Query: 440 HMMLEYDRLYRSTSTXXXXXXXARPARLRXXXXXXXXXXXXXXXXXXADGGDKPNQQWFV 619 HMM EYDRLYR++ A+PAR+R GDK +++ FV Sbjct: 121 HMMHEYDRLYRAS---------AKPARMR-----LFLFPVNPSHASFGSDGDKSDRERFV 166 Query: 620 DALNXXXXXXXXXXXXXXXNQDFLFGFEKPKLPDPKIELSISEPKLPDI--SDRNDXXXX 793 +ALN N DFLFG +K P P + P LP+I +D Sbjct: 167 EALNSGPSQVVEATKTPANNVDFLFGLDKGASPPPP---PVKVPDLPEIHVGSGHDDRFI 223 Query: 794 XXXXXXXXXXXXXXXXXXXAMFIRKNEENL--NMTG--RGFQGDFFM---PEKPAPTVVP 952 I N +N+ N+ G GD++M PEK +P +P Sbjct: 224 GSDPSNLQAHLQRMQIREHEQSIGCNRKNIDENLVGGYAAAGGDYYMQKLPEKVSPANLP 283 Query: 953 V---PRQMPAGGYWQDRNMSAVTGGGYSDPVPGVESXXXXXXXXXXXXXXXXXXAGRYNT 1123 V P+ GYW ++ GGG+ V + A Y+ Sbjct: 284 VTMPPQVTAPPGYWPEKQ---AAGGGFPAAVAVTTAPGQMEQPVYMISGPAQGTA--YHA 338 Query: 1124 PAMNXXXXXXXXXXXXXXXXXXXXXXXXXXPDVYREQPVYSMGXXXXXXXXXXXXXXXXX 1303 P + PDVYREQPVY++ Sbjct: 339 PQV----MRQVTGQTGQAYYMQRMGAPGHGPDVYREQPVYNV---------VPQHHQPPP 385 Query: 1304 XXXXXXXXXXTKMMMGETGGYSTQVAFDSA-GRQVYYTA 1417 + + T G QVA+DSA GRQVYYTA Sbjct: 386 QMGPMGVMRPSGPGVAVTDGGYAQVAYDSAVGRQVYYTA 424 >ref|XP_002285601.1| PREDICTED: uncharacterized protein LOC100255721 [Vitis vinifera] Length = 462 Score = 218 bits (556), Expect = 3e-54 Identities = 173/476 (36%), Positives = 211/476 (44%), Gaps = 34/476 (7%) Frame = +2 Query: 95 MENYPYTSSYPDSHDSSPRSE-------SWDDXXXXXXXSSNYKVKFMCSYGGKILPRPH 253 MENY YPDSHDSSPRS SWD+ SNYKVKFMCSYGGKI PRP Sbjct: 1 MENY---YPYPDSHDSSPRSREIDTENASWDEPP------SNYKVKFMCSYGGKIHPRPQ 51 Query: 254 DNQLSYVGGDTKILSMDRNVKFSNIISKLSTLCSDSDICFKYQLPGEDLDALISVTNDED 433 DNQL+YVGG+TKILS+DRN+KF +SK+S++C + ++C KYQLPGEDLDALISVTNDED Sbjct: 52 DNQLAYVGGETKILSVDRNIKFPGFMSKISSIC-EGEVCLKYQLPGEDLDALISVTNDED 110 Query: 434 LEHMMLEYDRLYRSTSTXXXXXXXARPARLRXXXXXXXXXXXXXXXXXXADGGDKPNQQW 613 LEHMMLEYDRL R ++ + ARLR K +QW Sbjct: 111 LEHMMLEYDRLCRPSN---------KQARLR----LFLFPLTPPASTSFGSNETKSERQW 157 Query: 614 FVDALN----XXXXXXXXXXXXXXXNQDFLFGFEKPKLPDPKIELS--ISEPKLPDI--- 766 FVDALN N DFLFG +K P P ++L P +PD+ Sbjct: 158 FVDALNSVQIQPLEGSSPQAAASETNPDFLFGLDKGLAPPPPVKLQDPTPPPTVPDVLPK 217 Query: 767 --SDRND-------------XXXXXXXXXXXXXXXXXXXXXXXAMFIRKNEENLNMTGRG 901 S R+D AMF RKN+E+ R Sbjct: 218 DYSVRSDPGSEDRHVVGDPVVSPADYQRQIQELQRLQIASQEQAMFQRKNDES---NTRA 274 Query: 902 FQGDFF---MPEKPAPTVVPVPRQMPAGGYWQDRNMSAVTGGGYSDPVPGVESXXXXXXX 1072 + +++ +PEK AP +P +PA YW +R+M T GGY PV Sbjct: 275 YPAEYYAQKIPEKLAPAPQQMPVSIPA-TYWPERHM---TTGGY--PVAA-------STG 321 Query: 1073 XXXXXXXXXXXAGRYNTPAMNXXXXXXXXXXXXXXXXXXXXXXXXXXPDVYREQPVYSMG 1252 AG Y TP + DVYRE VY+ Sbjct: 322 TEQSVYLIHTSAGVYQTPGLR---------PMTGQLAQPYYGMQRVVSDVYREPQVYNAA 372 Query: 1253 XXXXXXXXXXXXXXXXXXXXXXXXXXXTKMMMGETGGYSTQVAFDSAGRQVYYTAP 1420 T+ GY+ QV +DS GRQVYYT P Sbjct: 373 PPHQQQKVGAYGEGMGMMRPSASGVGVTEQ------GYA-QVTYDSTGRQVYYTTP 421 >ref|XP_002313211.1| predicted protein [Populus trichocarpa] gi|222849619|gb|EEE87166.1| predicted protein [Populus trichocarpa] Length = 448 Score = 214 bits (544), Expect = 6e-53 Identities = 155/405 (38%), Positives = 197/405 (48%), Gaps = 20/405 (4%) Frame = +2 Query: 95 MENYPYTSSYPDSHDSSPRSES--------WDDXXXXXXXSSNYKVKFMCSYGGKILPRP 250 M+N +SYPDS DSSPRS W+D +YK KFMCSYGGKI PRP Sbjct: 1 MDNTYSYNSYPDSGDSSPRSREIDFDNPTPWEDQSQQP---QSYKAKFMCSYGGKIHPRP 57 Query: 251 HDNQLSYVGGDTKILSMDRNVKFSNIISKLSTLCSDSDICFKYQLPGEDLDALISVTNDE 430 HDNQL Y+GG+TKIL+ DRN+KFS +ISKLS LC D+D+ FKYQLPGEDLDALISVTND+ Sbjct: 58 HDNQLVYMGGETKILAADRNIKFSVMISKLSALCGDTDVAFKYQLPGEDLDALISVTNDD 117 Query: 431 DLEHMMLEYDRLYRSTSTXXXXXXXARPARLRXXXXXXXXXXXXXXXXXXADGGDKPNQQ 610 DLEHMM EYDRLYR+T A+PAR+R +DGG + +++ Sbjct: 118 DLEHMMHEYDRLYRAT---------AKPARMR----LFLFPVNPSPASFGSDGG-RSDRE 163 Query: 611 WFVDALNXXXXXXXXXXXXXXXNQDFLFGFEKPKLPDPKIELSISEPKLPDI---SDRND 781 FV+ALN N DFLFG +K P P +++ P LP+I S +D Sbjct: 164 RFVEALNSVPSQVVEATKTAANNVDFLFGLDKGAPPPPPVKV----PDLPEIHAGSGHDD 219 Query: 782 XXXXXXXXXXXXXXXXXXXXXXXAM--FIRKN-EENLNMTGRGFQGDFFM---PEKPAPT 943 + RKN +ENL GD++M PE+ P Sbjct: 220 RVIGSDPLSLQAQLQRMQIREPEQQVGYNRKNSDENLVGGYAAAGGDYYMQKLPERAPPA 279 Query: 944 VVPV--PRQMPAG-GYWQDRNMSAVTGGGYSDPVPGVESXXXXXXXXXXXXXXXXXXAGR 1114 +PV P+Q+ A GYW ++ GGG+ P + Sbjct: 280 NLPVTMPQQVTASPGYWSEKQ---AAGGGF--PAGMTVTTSPGQMEQPVYVIQGPGPGTV 334 Query: 1115 YNTPAMNXXXXXXXXXXXXXXXXXXXXXXXXXXPDVYREQPVYSM 1249 Y+ P + PDVYREQPVY+M Sbjct: 335 YHAPPV----MRQVTGQTGQGYYMQRMGGPGHGPDVYREQPVYNM 375 >ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254138 [Vitis vinifera] Length = 467 Score = 213 bits (543), Expect = 8e-53 Identities = 178/494 (36%), Positives = 221/494 (44%), Gaps = 34/494 (6%) Frame = +2 Query: 95 MENYPYTSSYPDSHDSSPRSE----------SWDDXXXXXXXSSNYKVKFMCSYGGKILP 244 MENY YTS Y DS +SSPRS SW+D KVKFMCSYGGKI P Sbjct: 1 MENYTYTS-YADSGESSPRSRELEFENSGAASWEDQPLHQPS----KVKFMCSYGGKIQP 55 Query: 245 RPHDNQLSYVGGDTKILSMDRNVKFSNIISKLSTLCSDSDICFKYQLPGEDLDALISVTN 424 RPHDNQLSY GG+TKILS+DR++KFS +I+KL LC ++D+CFKYQLPGEDLDALISVTN Sbjct: 56 RPHDNQLSYTGGETKILSVDRSIKFSPLINKLCALC-EADVCFKYQLPGEDLDALISVTN 114 Query: 425 DEDLEHMMLEYDRLYRSTSTXXXXXXXARPARLRXXXXXXXXXXXXXXXXXXADGGDKPN 604 D+DLEHMM EYDRL R + A+PARLR G K Sbjct: 115 DDDLEHMMHEYDRLCRPS---------AKPARLR-------LFLFPATPPSVGSGDMKTE 158 Query: 605 QQWFVDALN----XXXXXXXXXXXXXXXNQDFLFGFEK---PKLPDPKIELSISEPKLPD 763 ++ F +A+N N DFLFG +K P P K+ + + EP +P Sbjct: 159 RERFFEAMNSGPIQSVDATSPPATAPPSNVDFLFGLDKGVSPPAPVAKLPVPVPEPPVPA 218 Query: 764 -----ISDRNDXXXXXXXXXXXXXXXXXXXXXXXAMFIRKNEENL-------NMTGRGFQ 907 ++ D + I E+ NM G G+ Sbjct: 219 EIPSLVNPGGDGRVFAADLGVNQAEIQRQIQDLQRLQISAQEQGAYQRKSDDNMYG-GYA 277 Query: 908 GDFF---MPEKPAPTVVPVPRQMPAGGYWQDRNMSAVTGGGYSDPVPGVESXXXXXXXXX 1078 GD++ MPEK AP +P +PA YWQ++ GGG+ VP Sbjct: 278 GDYYVQKMPEK-APPQSTIPATVPA-TYWQEKR---APGGGFPGGVPATPG------LQE 326 Query: 1079 XXXXXXXXXAGRYNTPAMNXXXXXXXXXXXXXXXXXXXXXXXXXXPDVYREQ-PVYS-MG 1252 A Y+TP PDVYREQ P+YS M Sbjct: 327 QPVYMIPAPASVYHTPVAR----------PVTGQSGQGYYAMRMGPDVYREQTPMYSVMQ 376 Query: 1253 XXXXXXXXXXXXXXXXXXXXXXXXXXXTKMMMGETGGYSTQVAFDSAGRQVYYTAPPPPS 1432 + + + +TG TQVA+DS GRQVYYTA P Sbjct: 377 QPPVQATMPAPAPKLPNYSEGLGMGRPSGVGVADTG--YTQVAYDSQGRQVYYTA---PG 431 Query: 1433 GVVMTSSYPTAVTT 1474 GVV AV+T Sbjct: 432 GVVAPYQTMAAVST 445 >gb|ACJ54183.1| PB1 domain-containing protein [Nicotiana benthamiana] Length = 254 Score = 211 bits (538), Expect = 3e-52 Identities = 124/240 (51%), Positives = 147/240 (61%), Gaps = 16/240 (6%) Frame = +2 Query: 95 MENYPYTSSYPDSHDSSPRSE-------SWDDXXXXXXXSSNYKVKFMCSYGGKILPRPH 253 MENY Y SSYPDS +SSPRS +WDD S+YKVKFMCSYGGKI PRPH Sbjct: 1 MENYSY-SSYPDSVNSSPRSREIDCENAAWDDQPP-----SSYKVKFMCSYGGKIHPRPH 54 Query: 254 DNQLSYVGGDTKILSMDRNVKFSNIISKLSTLCSDSDICFKYQLPGEDLDALISVTNDED 433 DNQL+YVGG+TKILS+DRN++FSN+I+KLS++ SD ++CFKYQLPGEDLDALISVTNDED Sbjct: 55 DNQLAYVGGETKILSVDRNIRFSNLITKLSSI-SDCEVCFKYQLPGEDLDALISVTNDED 113 Query: 434 LEHMMLEYDRLYRSTSTXXXXXXXARPARLRXXXXXXXXXXXXXXXXXXADGGDKPNQQW 613 LEHMMLEYDRLYR + A+PARLR KP QW Sbjct: 114 LEHMMLEYDRLYRGS---------AKPARLR----LFLFPMNTPATSTFGSTDSKPESQW 160 Query: 614 FVDALN------XXXXXXXXXXXXXXXNQDFLFGFEKPKLPDP---KIELSISEPKLPDI 766 FVDALN DFLFG EK + P K++ + P +P++ Sbjct: 161 FVDALNSVQLQDVNSPTAVSSVPATAGTPDFLFGLEKGQAQQPPPVKLQDPVPPPPVPEV 220