BLASTX nr result

ID: Coptis25_contig00000521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000521
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|2...   247   e-125
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           248   e-124
ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vi...   248   e-123
emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]   248   e-123
ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|2...   243   e-123

>ref|XP_002315391.1| predicted protein [Populus trichocarpa] gi|222864431|gb|EEF01562.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  247 bits (631), Expect(2) = e-125
 Identities = 116/128 (90%), Positives = 122/128 (95%)
 Frame = +2

Query: 596 KLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 775
           KLPRI+RC QIMGR+EQD+L+AAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC
Sbjct: 140 KLPRIMRCVQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 199

Query: 776 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVN 955
           DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDEE EV  KIKKAYCPP IV 
Sbjct: 200 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEVEVKTKIKKAYCPPQIVE 259

Query: 956 GNPCLEYV 979
           GNPCLEY+
Sbjct: 260 GNPCLEYI 267



 Score =  227 bits (578), Expect(2) = e-125
 Identities = 111/157 (70%), Positives = 124/157 (78%), Gaps = 2/157 (1%)
 Frame = +3

Query: 48  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTIXXXXX 227
           L+LEERF++VRS+GEECIQEDEL NLLEKKP PI YDGFEPSGRMHIAQG++KTI     
Sbjct: 1   LSLEERFQLVRSVGEECIQEDELRNLLEKKPLPICYDGFEPSGRMHIAQGVMKTI----- 55

Query: 228 XXXXXXXXXXXXXXXXXTINVNKLVSASCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYL 407
                              NVNKL  A C++KIW+ADWFAQLNNKMGGDLKKI+T+GEYL
Sbjct: 56  -------------------NVNKLTKAGCKMKIWIADWFAQLNNKMGGDLKKIKTVGEYL 96

Query: 408 IEIWKAAGMNLDG--VEFLWSSDEINSRAHEYWPLVM 512
           IEIWKA GM++DG  VEFLWSSDEINSRAHEYWPLVM
Sbjct: 97  IEIWKAVGMDIDGDKVEFLWSSDEINSRAHEYWPLVM 133


>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  248 bits (634), Expect(2) = e-124
 Identities = 114/128 (89%), Positives = 125/128 (97%)
 Frame = +2

Query: 596 KLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 775
           KLPRI+RCCQIMGR+EQD+L+AAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC
Sbjct: 197 KLPRILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 256

Query: 776 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVN 955
           DDI+RKNKPIILSHHMLPGLQ+GQEKMSKSDPSSSIYMEDEEA+VN+KIKKA+CPP +V 
Sbjct: 257 DDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIYMEDEEADVNLKIKKAFCPPKVVE 316

Query: 956 GNPCLEYV 979
            NPCLEY+
Sbjct: 317 KNPCLEYI 324



 Score =  225 bits (574), Expect(2) = e-124
 Identities = 111/157 (70%), Positives = 122/157 (77%), Gaps = 2/157 (1%)
 Frame = +3

Query: 48  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTIXXXXX 227
           ++LEE+FKIVRSIGEECIQEDELMNLL KKPQP+ YDGFEPSGRMHIAQG+LK +     
Sbjct: 58  MSLEEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKAL----- 112

Query: 228 XXXXXXXXXXXXXXXXXTINVNKLVSASCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYL 407
                              NVNKL SA C+VKIW+ADWFAQLNNKMGGDLKKI  +G+YL
Sbjct: 113 -------------------NVNKLTSAGCKVKIWIADWFAQLNNKMGGDLKKIEVVGQYL 153

Query: 408 IEIWKAAGMNLDG--VEFLWSSDEINSRAHEYWPLVM 512
           IEIWKA GMNL+G  VEFLWSS EINSRAHEYWPLVM
Sbjct: 154 IEIWKAVGMNLEGGHVEFLWSSKEINSRAHEYWPLVM 190


>ref|XP_002274369.1| PREDICTED: tyrosyl-tRNA synthetase [Vitis vinifera]
           gi|297742518|emb|CBI34667.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  248 bits (632), Expect(2) = e-123
 Identities = 117/128 (91%), Positives = 123/128 (96%)
 Frame = +2

Query: 596 KLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 775
           KLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKADICQLGMDQRKVNVLAREYC
Sbjct: 174 KLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 233

Query: 776 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVN 955
           DDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDEEAEVNVKIKKAYCPP +V 
Sbjct: 234 DDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVNVKIKKAYCPPKVVE 293

Query: 956 GNPCLEYV 979
           GNPCLEYV
Sbjct: 294 GNPCLEYV 301



 Score =  221 bits (564), Expect(2) = e-123
 Identities = 109/157 (69%), Positives = 121/157 (77%), Gaps = 2/157 (1%)
 Frame = +3

Query: 48  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTIXXXXX 227
           +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI     
Sbjct: 35  MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTI----- 89

Query: 228 XXXXXXXXXXXXXXXXXTINVNKLVSASCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYL 407
                              +VNKL SA CRVKIW+ADWFAQLNNKMGGDLKKI T+G YL
Sbjct: 90  -------------------SVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYL 130

Query: 408 IEIWKAAGMNLDG--VEFLWSSDEINSRAHEYWPLVM 512
           IEIWKA GM+LDG  VEFLWSS EIN+RAHEYWP VM
Sbjct: 131 IEIWKAVGMDLDGGKVEFLWSSKEINARAHEYWPRVM 167


>emb|CAN65657.1| hypothetical protein VITISV_000951 [Vitis vinifera]
          Length = 385

 Score =  248 bits (632), Expect(2) = e-123
 Identities = 117/128 (91%), Positives = 123/128 (96%)
 Frame = +2

Query: 596 KLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 775
           KLPRI+RC QIMGR+EQ++LSAAQI YPCMQCADIFFLKADICQLGMDQRKVNVLAREYC
Sbjct: 174 KLPRIMRCVQIMGRSEQEELSAAQILYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 233

Query: 776 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPNIVN 955
           DDIK KNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDEEAEVNVKIKKAYCPP +V 
Sbjct: 234 DDIKMKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVNVKIKKAYCPPKVVE 293

Query: 956 GNPCLEYV 979
           GNPCLEYV
Sbjct: 294 GNPCLEYV 301



 Score =  221 bits (564), Expect(2) = e-123
 Identities = 109/157 (69%), Positives = 121/157 (77%), Gaps = 2/157 (1%)
 Frame = +3

Query: 48  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTIXXXXX 227
           +TLEE+F+IVRS+GEECIQEDELMNLL  KP+PI YDGFEPSGRMHIAQG++KTI     
Sbjct: 35  MTLEEKFRIVRSVGEECIQEDELMNLLRNKPEPICYDGFEPSGRMHIAQGVMKTI----- 89

Query: 228 XXXXXXXXXXXXXXXXXTINVNKLVSASCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYL 407
                              +VNKL SA CRVKIW+ADWFAQLNNKMGGDLKKI T+G YL
Sbjct: 90  -------------------SVNKLTSAGCRVKIWIADWFAQLNNKMGGDLKKIETVGRYL 130

Query: 408 IEIWKAAGMNLDG--VEFLWSSDEINSRAHEYWPLVM 512
           IEIWKA GM+LDG  VEFLWSS EIN+RAHEYWP VM
Sbjct: 131 IEIWKAVGMDLDGGKVEFLWSSKEINARAHEYWPRVM 167


>ref|XP_002310952.1| predicted protein [Populus trichocarpa] gi|222850772|gb|EEE88319.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  243 bits (619), Expect(2) = e-123
 Identities = 116/129 (89%), Positives = 122/129 (94%), Gaps = 1/129 (0%)
 Frame = +2

Query: 596 KLPRIVRCCQIMGRNEQDDLSAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 775
           KLPRI+RC QIMGR+EQD+L+AAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC
Sbjct: 140 KLPRIMRCVQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYC 199

Query: 776 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYC-PPNIV 952
           DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSI+MEDEEAEV  KIKKAYC PP I 
Sbjct: 200 DDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVKTKIKKAYCPPPQIA 259

Query: 953 NGNPCLEYV 979
            GNPCLEY+
Sbjct: 260 EGNPCLEYI 268



 Score =  226 bits (576), Expect(2) = e-123
 Identities = 110/157 (70%), Positives = 124/157 (78%), Gaps = 2/157 (1%)
 Frame = +3

Query: 48  LTLEERFKIVRSIGEECIQEDELMNLLEKKPQPIAYDGFEPSGRMHIAQGILKTIXXXXX 227
           ++LEERF++VRS+GEECIQEDEL NLL+KKP PI YDGFEPSGRMHIAQG++KTI     
Sbjct: 1   MSLEERFQLVRSVGEECIQEDELRNLLDKKPLPICYDGFEPSGRMHIAQGVMKTI----- 55

Query: 228 XXXXXXXXXXXXXXXXXTINVNKLVSASCRVKIWVADWFAQLNNKMGGDLKKIRTIGEYL 407
                              NVNKL  A C+VKIW+ADWFAQLNNKMGGDLKKI+T+GEYL
Sbjct: 56  -------------------NVNKLTKAGCKVKIWIADWFAQLNNKMGGDLKKIKTVGEYL 96

Query: 408 IEIWKAAGMNLDG--VEFLWSSDEINSRAHEYWPLVM 512
           IEIWKA GM++DG  VEFLWSSDEINSRAHEYWPLVM
Sbjct: 97  IEIWKAVGMDIDGDKVEFLWSSDEINSRAHEYWPLVM 133


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