BLASTX nr result

ID: Coptis25_contig00000493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000493
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265235.1| PREDICTED: uncharacterized protein LOC100251...   284   4e-74
ref|XP_004136870.1| PREDICTED: uncharacterized protein LOC101218...   270   5e-70
ref|XP_003531037.1| PREDICTED: uncharacterized protein LOC100780...   265   3e-68
gb|AFK41555.1| unknown [Lotus japonicus]                              260   7e-67
gb|AFK42545.1| unknown [Medicago truncatula]                          252   1e-64

>ref|XP_002265235.1| PREDICTED: uncharacterized protein LOC100251961 [Vitis vinifera]
            gi|147777022|emb|CAN74476.1| hypothetical protein
            VITISV_032714 [Vitis vinifera]
            gi|296085667|emb|CBI29466.3| unnamed protein product
            [Vitis vinifera]
          Length = 246

 Score =  284 bits (727), Expect = 4e-74
 Identities = 156/254 (61%), Positives = 182/254 (71%), Gaps = 1/254 (0%)
 Frame = +1

Query: 529  MSLSLIQSYSSDEEEEQLHKLQKFLSXXXXXXXXXXXXXXXXXXXXXXRNSSRFEDPNQP 708
            MSL+LIQ YSS EEEE      +F                        + S  F  P   
Sbjct: 1    MSLALIQGYSSAEEEEN----DRFSQNSSEEDDQNDVAYAPLSRPIGDKPSFHF--PTAS 54

Query: 709  NNSILPSAFDAFSEVSGPPGFLNNSVAEHVLAEDAVDQSRGRRGGRKYQREKQDLPAGVV 888
            + S LPSAFDAFSE+SGPP FLNN V E   AED V++ R R GG K + EK+ LPAG V
Sbjct: 55   SGSALPSAFDAFSEISGPPDFLNNCVQEQASAED-VERQRRRHGGWKNRSEKE-LPAGAV 112

Query: 889  LEAKAQLVGIRERVRSDMDGNHPPTSSVPSQKGSPSTVPGEGKRVVSATNPDAKDAAELL 1068
            +++KAQLVGI ERVRSD++GN  P SSV   KGS ST  GEGKRV +A NP+A+DAAELL
Sbjct: 113  VKSKAQLVGIHERVRSDIEGNLAPKSSVQPPKGSLSTTQGEGKRVATAANPNAEDAAELL 172

Query: 1069 RMCLQCGIPKTYSSARGMVCPVCGDRPI-DPDKESDKKKGSTVKDKEKNKRMKGQSSHST 1245
            RMC+QCGIPKTYSSARGMVCP CGDRP+ D +KE+DKKKGST+K+KEKNKRMKGQSSH++
Sbjct: 173  RMCMQCGIPKTYSSARGMVCPQCGDRPLEDANKETDKKKGSTIKEKEKNKRMKGQSSHAS 232

Query: 1246 WKSETEMQLRQQFD 1287
            WKSETEMQLRQQ+D
Sbjct: 233  WKSETEMQLRQQYD 246


>ref|XP_004136870.1| PREDICTED: uncharacterized protein LOC101218280 [Cucumis sativus]
            gi|449478896|ref|XP_004155447.1| PREDICTED:
            uncharacterized protein LOC101224609 [Cucumis sativus]
          Length = 249

 Score =  270 bits (691), Expect = 5e-70
 Identities = 153/258 (59%), Positives = 175/258 (67%), Gaps = 5/258 (1%)
 Frame = +1

Query: 529  MSLSLIQSYSSDEEEEQLHKLQKFLSXXXXXXXXXXXXXXXXXXXXXX---RNSSRFEDP 699
            MSLSL+Q YSS EEE Q + +    S                         R+ S FE P
Sbjct: 1    MSLSLLQGYSSAEEEAQHNSVFNHTSSDDDDEDLASAPAAAASTVTVNLSIRDKSLFELP 60

Query: 700  NQPNNSILPSAFDAFSEVSGPPGFLNNSVAEHVLAEDAVDQSRGRRG--GRKYQREKQDL 873
               +   LPSAFDAFSEVSGPP FLNNSV E+    DA DQ RG  G  GR+ ++EK+DL
Sbjct: 61   QPSSQPGLPSAFDAFSEVSGPPEFLNNSVEEYAAPRDA-DQPRGGHGHGGRRNRKEKKDL 119

Query: 874  PAGVVLEAKAQLVGIRERVRSDMDGNHPPTSSVPSQKGSPSTVPGEGKRVVSATNPDAKD 1053
            P G VLEAKAQLVGI ERVRSD++ NH   SS+       S    E KRV +A NP+A+D
Sbjct: 120  PTGAVLEAKAQLVGIHERVRSDVESNHSSNSSI-------SNATPESKRVATAANPNAED 172

Query: 1054 AAELLRMCLQCGIPKTYSSARGMVCPVCGDRPIDPDKESDKKKGSTVKDKEKNKRMKGQS 1233
            AAELLRMCL CGIPKT+S+ARGM CP+CGDRP +PD ES KKKGSTVKDKEK KRM+GQS
Sbjct: 173  AAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPDSES-KKKGSTVKDKEKIKRMRGQS 231

Query: 1234 SHSTWKSETEMQLRQQFD 1287
            SH+TWKSETEMQLRQQFD
Sbjct: 232  SHATWKSETEMQLRQQFD 249


>ref|XP_003531037.1| PREDICTED: uncharacterized protein LOC100780521 [Glycine max]
          Length = 248

 Score =  265 bits (676), Expect = 3e-68
 Identities = 148/256 (57%), Positives = 177/256 (69%), Gaps = 3/256 (1%)
 Frame = +1

Query: 529  MSLSLIQSYSSDEEEEQLHKLQKFLSXXXXXXXXXXXXXXXXXXXXXXRNSSRFED--PN 702
            MSLSLIQ YSS EEE+   + Q   S                             D  PN
Sbjct: 1    MSLSLIQGYSSAEEEQDEDQPQPHNSDLEDSDDDDAAAGTITAANHPSLGDRSIFDHVPN 60

Query: 703  QPNNSILPSAFDAFSEVSGPPGFLNNSVAEHVLAEDAVDQSRGRRGGRKYQREKQDLPAG 882
             P+ S LPSAFDAFSE++GPP FLNNSV E+  + DA D+ +G+   R+ ++ K+DLP G
Sbjct: 61   PPSASGLPSAFDAFSEIAGPPQFLNNSVEEYKPSRDA-DEQQGKHANRRRRKNKKDLPTG 119

Query: 883  VVLEAKAQLVGIRERVRSDMDGNHPPTSSVPSQKGSPSTVPGEGKRVVSATNPDAKDAAE 1062
             V+EAK QLVGI ERVRSD++G+ PPTS+      +  T  G GKRV +ATNP+A+DAA+
Sbjct: 120  AVVEAKPQLVGIHERVRSDINGSQPPTSA------ALGTSEG-GKRVPTATNPNAEDAAD 172

Query: 1063 LLRMCLQCGIPKTYSSARGMVCPVCGDRPIDPDKESD-KKKGSTVKDKEKNKRMKGQSSH 1239
            LLRMCLQCGIPKTYS+ARGMVCPVCGDRP   D  ++ KKKGSTVKDKEK+KRMKGQSSH
Sbjct: 173  LLRMCLQCGIPKTYSNARGMVCPVCGDRPPKDDTSAESKKKGSTVKDKEKSKRMKGQSSH 232

Query: 1240 STWKSETEMQLRQQFD 1287
            +TWKSETEM LRQQFD
Sbjct: 233  ATWKSETEMHLRQQFD 248


>gb|AFK41555.1| unknown [Lotus japonicus]
          Length = 240

 Score =  260 bits (664), Expect = 7e-67
 Identities = 142/253 (56%), Positives = 171/253 (67%)
 Frame = +1

Query: 529  MSLSLIQSYSSDEEEEQLHKLQKFLSXXXXXXXXXXXXXXXXXXXXXXRNSSRFEDPNQP 708
            MSLSL+QSYSSDE+E      Q ++S                      R  S F+     
Sbjct: 1    MSLSLLQSYSSDEDEHH----QPYISNSDEDHDGDGEPSTAAHPSLADR--SIFDHLPPQ 54

Query: 709  NNSILPSAFDAFSEVSGPPGFLNNSVAEHVLAEDAVDQSRGRRGGRKYQREKQDLPAGVV 888
            ++S LPSAFDAFSEVSGPP FLNNS+ E+    +  +Q + RRG R+ ++ K+DLP+G V
Sbjct: 55   SSSALPSAFDAFSEVSGPPQFLNNSMEEYNPVREEAEQEQERRGSRRQRKVKKDLPSGAV 114

Query: 889  LEAKAQLVGIRERVRSDMDGNHPPTSSVPSQKGSPSTVPGEGKRVVSATNPDAKDAAELL 1068
            LEAK QLVGI ERVRSD++G+ PPTS+  S          E KRV S TNP  +DAA+LL
Sbjct: 115  LEAKPQLVGIHERVRSDINGSQPPTSTTLSTSE-------ETKRVPSVTNPTPEDAADLL 167

Query: 1069 RMCLQCGIPKTYSSARGMVCPVCGDRPIDPDKESDKKKGSTVKDKEKNKRMKGQSSHSTW 1248
            RMCLQCGIPKT+S+ARGMVCPVCGDRP        K KGST+KDKEK+KRMKGQSSH++W
Sbjct: 168  RMCLQCGIPKTFSNARGMVCPVCGDRPPKDPSTETKNKGSTIKDKEKSKRMKGQSSHASW 227

Query: 1249 KSETEMQLRQQFD 1287
            KSETEM LRQQFD
Sbjct: 228  KSETEMHLRQQFD 240


>gb|AFK42545.1| unknown [Medicago truncatula]
          Length = 242

 Score =  252 bits (644), Expect = 1e-64
 Identities = 141/254 (55%), Positives = 167/254 (65%), Gaps = 1/254 (0%)
 Frame = +1

Query: 529  MSLSLIQSYSS-DEEEEQLHKLQKFLSXXXXXXXXXXXXXXXXXXXXXXRNSSRFEDPNQ 705
            MSLSLIQ YSS +EEEE    +   +S                        S     P  
Sbjct: 1    MSLSLIQGYSSAEEEEEDQPHIHNSVSDDQDDADYNSAEPSAASHPSLGDRSIFDHHPPP 60

Query: 706  PNNSILPSAFDAFSEVSGPPGFLNNSVAEHVLAEDAVDQSRGRRGGRKYQREKQDLPAGV 885
            P+ S LPSAFDAFSE+ GPP FLN+S  E         Q+  +R  R++++EK+DLP G 
Sbjct: 61   PSASGLPSAFDAFSEIPGPPQFLNHSTGEF-----NPPQNDHQRSSRRHRKEKRDLPTGA 115

Query: 886  VLEAKAQLVGIRERVRSDMDGNHPPTSSVPSQKGSPSTVPGEGKRVVSATNPDAKDAAEL 1065
            V+EAKAQLVGI ERVRSD++G  PPT +  S   +       GKRV +ATNP+A+DAAEL
Sbjct: 116  VVEAKAQLVGIHERVRSDINGGQPPTPATVSTSET-------GKRVPTATNPNAEDAAEL 168

Query: 1066 LRMCLQCGIPKTYSSARGMVCPVCGDRPIDPDKESDKKKGSTVKDKEKNKRMKGQSSHST 1245
            LRMC+QCGIPKTYSSARGMVCPVCGDRP        KKKGSTVKDKEK+KRM+GQSSH++
Sbjct: 169  LRMCVQCGIPKTYSSARGMVCPVCGDRPPPEPSAEAKKKGSTVKDKEKSKRMRGQSSHAS 228

Query: 1246 WKSETEMQLRQQFD 1287
            WKSETEMQLRQ FD
Sbjct: 229  WKSETEMQLRQHFD 242


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