BLASTX nr result

ID: Coptis25_contig00000474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000474
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphata...   185   1e-44
emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]   183   4e-44
gb|AAG49895.1| PnFL-1 [Ipomoea nil]                                   149   9e-34
ref|XP_002979958.1| hypothetical protein SELMODRAFT_111947 [Sela...   123   4e-26
ref|NP_001169593.1| uncharacterized protein LOC100383474 [Zea ma...   123   5e-26

>ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphatase [Vitis vinifera]
          Length = 214

 Score =  185 bits (469), Expect = 1e-44
 Identities = 95/188 (50%), Positives = 122/188 (64%)
 Frame = -3

Query: 640 SLHIHQICQPIPRSLLKLLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           SLH+H + QP+PRSLLK LE++GDGRF+FP+ ++                          
Sbjct: 33  SLHLHTLFQPVPRSLLKTLELAGDGRFFFPVAVSLLSSSSLRPILIPLLIGLLLDLLL-- 90

Query: 460 XXXIVGSIKFLIKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVQSL 281
               VG IK++++RPRPVYNKGMHLTVA+DHWSFPSGHSSRV F ++FLYLS+  I +++
Sbjct: 91  ----VGVIKYIVRRPRPVYNKGMHLTVAVDHWSFPSGHSSRVVFAAAFLYLSTALIGEAV 146

Query: 280 VHFGLKGSNWIGSDGILIVRNFVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVQAQ 101
                  S +   D    V   V +V LWS ATS+SRVLLGRHFVFDV+AGACLG+++A 
Sbjct: 147 AQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLLGRHFVFDVVAGACLGVLEAL 206

Query: 100 LVFRFYMY 77
            VF F  Y
Sbjct: 207 FVFHFLRY 214


>emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]
          Length = 288

 Score =  183 bits (464), Expect = 4e-44
 Identities = 94/188 (50%), Positives = 121/188 (64%)
 Frame = -3

Query: 640 SLHIHQICQPIPRSLLKLLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           SLH+H + QP+PRSLLK LE++GDGRF+FP+ ++                          
Sbjct: 107 SLHLHTLFQPVPRSLLKTLELAGDGRFFFPVAVSLLSSSSLRPILIPLLIGLLLDLLL-- 164

Query: 460 XXXIVGSIKFLIKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVQSL 281
               VG IK++++RPRP YNKGMHLTVA+DHWSFPSGHSSRV F ++FLYLS+  I +++
Sbjct: 165 ----VGVIKYIVRRPRPXYNKGMHLTVAVDHWSFPSGHSSRVVFAAAFLYLSTALIGEAV 220

Query: 280 VHFGLKGSNWIGSDGILIVRNFVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVQAQ 101
                  S +   D    V   V +V LWS ATS+SRVLLGRHFVFDV+AGACLG+++A 
Sbjct: 221 AQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLLGRHFVFDVVAGACLGVLEAL 280

Query: 100 LVFRFYMY 77
            VF F  Y
Sbjct: 281 FVFHFLRY 288


>gb|AAG49895.1| PnFL-1 [Ipomoea nil]
          Length = 209

 Score =  149 bits (375), Expect = 9e-34
 Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 1/189 (0%)
 Frame = -3

Query: 640 SLHIHQICQPI-PRSLLKLLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXX 464
           SL ++ +  PI P S+LK LEISGDGR +FP+ I+                         
Sbjct: 28  SLRLYTLTHPILPYSVLKTLEISGDGRLFFPVIISILLATSAAAAFLVDLLLGAVLDLAV 87

Query: 463 XXXXIVGSIKFLIKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVQS 284
                +G +K LI+RPRPVYNK M L+ A+DHWSFPSGHSSRV FI++  YLS + +   
Sbjct: 88  -----IGILKHLIQRPRPVYNKNMFLSFAVDHWSFPSGHSSRVFFIATMFYLSFDLVQGF 142

Query: 283 LVHFGLKGSNWIGSDGILIVRNFVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVQA 104
           L+               L   +FVY++G W+  TS+SR+LLGRHFV DV+AGACLG+++ 
Sbjct: 143 LLDLRYD----------LFADHFVYIIGAWATITSVSRILLGRHFVLDVVAGACLGVLEG 192

Query: 103 QLVFRFYMY 77
              FRF+ Y
Sbjct: 193 LFSFRFFNY 201


>ref|XP_002979958.1| hypothetical protein SELMODRAFT_111947 [Selaginella moellendorffii]
           gi|300152185|gb|EFJ18828.1| hypothetical protein
           SELMODRAFT_111947 [Selaginella moellendorffii]
          Length = 212

 Score =  123 bits (309), Expect = 4e-26
 Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
 Frame = -3

Query: 640 SLHIHQICQPIPRSLLKLLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           SL IHQ    IPR +L++LE SGDG FW  + IA                          
Sbjct: 12  SLWIHQAGARIPRFVLRVLEFSGDGVFWI-VAIAALAFAAPSSPQLQLLVPDLMLGFVLD 70

Query: 460 XXXIVGSIKFLIKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVQSL 281
               V SIK +++RPRP+YNKGM++  ++DHWSFPSGHSSR  F+++F +L + S + S 
Sbjct: 71  VLL-VASIKTIVRRPRPIYNKGMYVISSVDHWSFPSGHSSRALFMATFFWLKAASSISS- 128

Query: 280 VHFGLKGSNWIGSDGILIVRNFV----YLVGLWSVATSMSRVLLGRHFVFDVIAGACLGL 113
                  S+   S     +  FV    +L   W+VAT++SRVLLGRH+V DV  G+ LG+
Sbjct: 129 ------SSSLPPSPPRASLLEFVVTVEFLALSWAVATAISRVLLGRHYVMDVFVGSSLGV 182

Query: 112 VQAQLVFRF 86
           ++A +V +F
Sbjct: 183 LEAAVVDKF 191


>ref|NP_001169593.1| uncharacterized protein LOC100383474 [Zea mays]
           gi|224030267|gb|ACN34209.1| unknown [Zea mays]
           gi|413923360|gb|AFW63292.1| hypothetical protein
           ZEAMMB73_037308 [Zea mays]
          Length = 204

 Score =  123 bits (308), Expect = 5e-26
 Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
 Frame = -3

Query: 640 SLHIHQICQPIPRSLLKLLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 461
           SL +H +  P+PR LLK LE++GDGR W P+PI+                          
Sbjct: 30  SLRLHALFLPVPRLLLKALEVAGDGRIWLPVPISLLLLSASPANASGAASPLLAGLVAGL 89

Query: 460 XXXI--VGSIKFLIKRPRPVYN-KGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIV 290
              +  VG +K  ++RPRP YN K M++ V+ DHWSFPSGHSSR   ++SFL        
Sbjct: 90  VLDLILVGLVKVFVRRPRPAYNAKDMYVAVSADHWSFPSGHSSRAFLVASFLAAGGFRPR 149

Query: 289 QSLVHFGLKGSNWIGSDGILIVRNFVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLV 110
           ++L                           LW+ ATS SRVLLGRH+V DV+AGACLG+ 
Sbjct: 150 EALF--------------------------LWAAATSASRVLLGRHYVLDVVAGACLGVF 183

Query: 109 QAQL 98
           +A L
Sbjct: 184 EAWL 187


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