BLASTX nr result

ID: Coptis25_contig00000461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000461
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516040.1| conserved hypothetical protein [Ricinus comm...   312   1e-82
ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|2...   297   3e-78
ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262...   293   7e-77
emb|CAN73131.1| hypothetical protein VITISV_030259 [Vitis vinifera]   293   7e-77
emb|CBI34984.3| unnamed protein product [Vitis vinifera]              290   6e-76

>ref|XP_002516040.1| conserved hypothetical protein [Ricinus communis]
            gi|223544945|gb|EEF46460.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 318

 Score =  312 bits (799), Expect = 1e-82
 Identities = 154/284 (54%), Positives = 208/284 (73%), Gaps = 1/284 (0%)
 Frame = -2

Query: 1054 IKRRKNGQPFFISVRFIGVALFTFCFIFDSLVSLVDAYNSKDRVGFALQLEIIAIACLFL 875
            I++   GQ    S+ +IG+ +F+F FI DSL+SL +A +SKD +G+ALQL+++AIA LFL
Sbjct: 40   IEKNPKGQ----SLIYIGITVFSFLFIIDSLISLFNAIDSKDTIGYALQLQVLAIAALFL 95

Query: 874  MYAVFGLLFVFTSFFTVPYSMLNLIVLFAFGQEFMHFYLQRKDPDGMENRYFDLLLVPIM 695
            +Y++ GLL  F+S    P S+LNL++LFAF +EF+ +YLQRKD  G+ENRYFDLLLVPI 
Sbjct: 96   LYSILGLLSKFSSSVLFPSSILNLVLLFAFVEEFLLYYLQRKDTSGIENRYFDLLLVPIS 155

Query: 694  VCMFSTVLEMSGWYNKSNLPVLSRGVGLIFQGTWFVQMGFSFYTNAIAQGCSLVEKSRGN 515
            +C+ ST+LE+      +N   L+RGVGLI QGTWFVQMG SFYTN I  GCSL E+SRG+
Sbjct: 156  ICVLSTILELKSSSKSNNYARLARGVGLILQGTWFVQMGISFYTNMIVHGCSLHERSRGD 215

Query: 514  FTVLCKGHMANHRGRAVATLQFNCHLAFMVMVIVAVYSFVAYKYGLADDYLNYKPLNAEL 335
            +T+ CKGH   HR R +ATLQFNCHLA +V+++ + YS +A K G  DD++ YKPL AE+
Sbjct: 216  YTIKCKGHPEYHRARGIATLQFNCHLALLVVMVTSAYSIMAKKNGGRDDFMRYKPLGAEM 275

Query: 334  RHLDHQGQFTLDSD-DEIVVEENGMKAKDLQMLLVSGVNGFGDH 206
            + ++  G FTLDSD DEI  EEN  + K  ++ +  GVNG+G H
Sbjct: 276  QQMEINGHFTLDSDEDEIQEEENVTEEKSTRIEV--GVNGYGSH 317


>ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|222836885|gb|EEE75278.1|
            predicted protein [Populus trichocarpa]
          Length = 325

 Score =  297 bits (761), Expect = 3e-78
 Identities = 149/280 (53%), Positives = 198/280 (70%)
 Frame = -2

Query: 1045 RKNGQPFFISVRFIGVALFTFCFIFDSLVSLVDAYNSKDRVGFALQLEIIAIACLFLMYA 866
            ++N      S  +I V +F+  FI +SL+S  +A NS+D+VG ALQL+I+A+A LFL+Y+
Sbjct: 50   QRNSNSSSSSANYITVTIFSLLFIVNSLISFFNAVNSRDQVGSALQLQILAVAALFLLYS 109

Query: 865  VFGLLFVFTSFFTVPYSMLNLIVLFAFGQEFMHFYLQRKDPDGMENRYFDLLLVPIMVCM 686
            V GLL  F+SF   P S+LNLIVLFAF +EF+ FY+QRKDP G+ENRYFDL+LVPI++C+
Sbjct: 110  VLGLLSNFSSFVRFPSSILNLIVLFAFVEEFLLFYMQRKDPSGIENRYFDLMLVPILICV 169

Query: 685  FSTVLEMSGWYNKSNLPVLSRGVGLIFQGTWFVQMGFSFYTNAIAQGCSLVEKSRGNFTV 506
             ST LE+   +  ++ P ++RGVGLI QG W VQMG SFYTN I  GCSL EKSRGN+++
Sbjct: 170  VSTTLELKSPWKSNDYPRIARGVGLILQGMWIVQMGLSFYTNLIVHGCSLHEKSRGNYSI 229

Query: 505  LCKGHMANHRGRAVATLQFNCHLAFMVMVIVAVYSFVAYKYGLADDYLNYKPLNAELRHL 326
             CKGH   HR R +ATLQFNCHLA +V+  ++VYS +A   G   D  +YKPL AE++ +
Sbjct: 230  KCKGHPEYHRARGIATLQFNCHLALLVISAMSVYSVMAKNNGARGD--SYKPLGAEMQQM 287

Query: 325  DHQGQFTLDSDDEIVVEENGMKAKDLQMLLVSGVNGFGDH 206
            ++ G FTLDSDD+ + EE  +  K      V  VNGFG H
Sbjct: 288  ENHGLFTLDSDDDEIREEEDVTMK---KGAVVAVNGFGSH 324


>ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262740 [Vitis vinifera]
          Length = 318

 Score =  293 bits (750), Expect = 7e-77
 Identities = 149/275 (54%), Positives = 193/275 (70%)
 Frame = -2

Query: 1030 PFFISVRFIGVALFTFCFIFDSLVSLVDAYNSKDRVGFALQLEIIAIACLFLMYAVFGLL 851
            P+   + F  +AL +F FI +SL SL+DA NSKDRVG  LQL+++A A LFL+YAV GLL
Sbjct: 47   PYSSPLTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATAFLFLLYAVLGLL 106

Query: 850  FVFTSFFTVPYSMLNLIVLFAFGQEFMHFYLQRKDPDGMENRYFDLLLVPIMVCMFSTVL 671
              FT    +P S L+LI LFAF +EF+ FYLQRKD  G+ENRYFD++LVPI +C+FSTVL
Sbjct: 107  MKFTDSIPLPSSFLSLICLFAFAEEFLLFYLQRKDTVGIENRYFDMMLVPITICLFSTVL 166

Query: 670  EMSGWYNKSNLPVLSRGVGLIFQGTWFVQMGFSFYTNAIAQGCSLVEKSRGNFTVLCKGH 491
            E+     KSNLP L+RG+GLI  GTWF+QMG SF+++ +  GCSL EKSRGN+TV CKGH
Sbjct: 167  ELKS--PKSNLPRLARGIGLILHGTWFLQMGISFFSSWMVHGCSLYEKSRGNYTVRCKGH 224

Query: 490  MANHRGRAVATLQFNCHLAFMVMVIVAVYSFVAYKYGLADDYLNYKPLNAELRHLDHQGQ 311
               HRGRA+ATLQFN HLAF+V+++VA +S ++ + G       Y+P+ AE   LD  GQ
Sbjct: 225  PEYHRGRAIATLQFNFHLAFLVVLVVAAFSIISRRNGGQGGSEQYRPIGAETHSLDLTGQ 284

Query: 310  FTLDSDDEIVVEENGMKAKDLQMLLVSGVNGFGDH 206
            F+L SDD+ +  E  M+ K     +  G NG G H
Sbjct: 285  FSLASDDDEIKGEESME-KQKPAAIEMGANGHGSH 318


>emb|CAN73131.1| hypothetical protein VITISV_030259 [Vitis vinifera]
          Length = 318

 Score =  293 bits (750), Expect = 7e-77
 Identities = 149/275 (54%), Positives = 193/275 (70%)
 Frame = -2

Query: 1030 PFFISVRFIGVALFTFCFIFDSLVSLVDAYNSKDRVGFALQLEIIAIACLFLMYAVFGLL 851
            P+   + F  +AL +F FI +SL SL+DA NSKDRVG  LQL+++A A LFL+YAV GLL
Sbjct: 47   PYSSPLTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATAFLFLLYAVLGLL 106

Query: 850  FVFTSFFTVPYSMLNLIVLFAFGQEFMHFYLQRKDPDGMENRYFDLLLVPIMVCMFSTVL 671
              FT    +P S L+LI LFAF +EF+ FYLQRKD  G+ENRYFD++LVPI +C+FSTVL
Sbjct: 107  XKFTDSIPLPSSFLSLICLFAFAEEFLLFYLQRKDTVGIENRYFDMMLVPITICLFSTVL 166

Query: 670  EMSGWYNKSNLPVLSRGVGLIFQGTWFVQMGFSFYTNAIAQGCSLVEKSRGNFTVLCKGH 491
            E+     KSNLP L+RG+GLI  GTWF+QMG SF+++ +  GCSL EKSRGN+TV CKGH
Sbjct: 167  ELKS--PKSNLPRLARGIGLILHGTWFLQMGISFFSSWMVHGCSLYEKSRGNYTVRCKGH 224

Query: 490  MANHRGRAVATLQFNCHLAFMVMVIVAVYSFVAYKYGLADDYLNYKPLNAELRHLDHQGQ 311
               HRGRA+ATLQFN HLAF+V+++VA +S ++ + G       Y+P+ AE   LD  GQ
Sbjct: 225  PEYHRGRAIATLQFNXHLAFLVVLVVAAFSIISRRNGGQGGSEQYRPIGAETHSLDLTGQ 284

Query: 310  FTLDSDDEIVVEENGMKAKDLQMLLVSGVNGFGDH 206
            F+L SDD+ +  E  M+ K     +  G NG G H
Sbjct: 285  FSLASDDDEIKGEESME-KQKPAAIEMGANGHGSH 318


>emb|CBI34984.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  290 bits (742), Expect = 6e-76
 Identities = 148/273 (54%), Positives = 192/273 (70%)
 Frame = -2

Query: 1030 PFFISVRFIGVALFTFCFIFDSLVSLVDAYNSKDRVGFALQLEIIAIACLFLMYAVFGLL 851
            P+   + F  +AL +F FI +SL SL+DA NSKDRVG  LQL+++A A LFL+YAV GLL
Sbjct: 59   PYSSPLTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATAFLFLLYAVLGLL 118

Query: 850  FVFTSFFTVPYSMLNLIVLFAFGQEFMHFYLQRKDPDGMENRYFDLLLVPIMVCMFSTVL 671
              FT    +P S L+LI LFAF +EF+ FYLQRKD  G+ENRYFD++LVPI +C+FSTVL
Sbjct: 119  MKFTDSIPLPSSFLSLICLFAFAEEFLLFYLQRKDTVGIENRYFDMMLVPITICLFSTVL 178

Query: 670  EMSGWYNKSNLPVLSRGVGLIFQGTWFVQMGFSFYTNAIAQGCSLVEKSRGNFTVLCKGH 491
            E+     KSNLP L+RG+GLI  GTWF+QMG SF+++ +  GCSL EKSRGN+TV CKGH
Sbjct: 179  ELKS--PKSNLPRLARGIGLILHGTWFLQMGISFFSSWMVHGCSLYEKSRGNYTVRCKGH 236

Query: 490  MANHRGRAVATLQFNCHLAFMVMVIVAVYSFVAYKYGLADDYLNYKPLNAELRHLDHQGQ 311
               HRGRA+ATLQFN HLAF+V+++VA +S ++ + G       Y+P+ AE   LD  GQ
Sbjct: 237  PEYHRGRAIATLQFNFHLAFLVVLVVAAFSIISRRNGGQGGSEQYRPIGAETHSLDLTGQ 296

Query: 310  FTLDSDDEIVVEENGMKAKDLQMLLVSGVNGFG 212
            F+L SDD+ +  E  M+ K     +  G NG G
Sbjct: 297  FSLASDDDEIKGEESME-KQKPAAIEMGANGHG 328


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