BLASTX nr result

ID: Coptis25_contig00000454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000454
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32925.3| unnamed protein product [Vitis vinifera]               81   4e-27
ref|XP_003543151.1| PREDICTED: interactor of constitutive active...    80   3e-26
ref|XP_003546766.1| PREDICTED: interactor of constitutive active...    80   7e-26
ref|XP_002300426.1| predicted protein [Populus trichocarpa] gi|2...    86   7e-26
emb|CAN73256.1| hypothetical protein VITISV_002134 [Vitis vinifera]    81   9e-26

>emb|CBI32925.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 81.3 bits (199), Expect(2) = 4e-27
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = -2

Query: 176 DSLHQKKLGTRVADLESQLGQAQEQLKKLKDQLASTEAAKREAQEELEKNKKEPV 12
           DS++QKKLGTR+ADLESQLGQA E+LK LK QLAS EAAK+EAQEELEK    P+
Sbjct: 55  DSVNQKKLGTRIADLESQLGQALEELKNLKFQLASAEAAKKEAQEELEKKANMPI 109



 Score = 67.4 bits (163), Expect(2) = 4e-27
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = -1

Query: 339 RERVSDVPQRQSSKVPFQVRTSGSDSNLLHQRPIVDRSSPKLGDRRSPRGSPTD 178
           R R S++PQRQS +   Q+RTS SDS+ LH RPI DR SPK+GDRRSPRG+ +D
Sbjct: 3   RTRGSEMPQRQSPRGSLQLRTSSSDSDPLHHRPITDR-SPKVGDRRSPRGAQSD 55


>ref|XP_003543151.1| PREDICTED: interactor of constitutive active ROPs 1-like isoform 1
           [Glycine max] gi|356549542|ref|XP_003543152.1|
           PREDICTED: interactor of constitutive active ROPs 1-like
           isoform 2 [Glycine max]
          Length = 377

 Score = 80.1 bits (196), Expect(2) = 3e-26
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = -2

Query: 176 DSLHQKKLGTRVADLESQLGQAQEQLKKLKDQLASTEAAKREAQEELEKNKKEPVIP 6
           + L+QKKLGTR+ADLESQLGQAQ +LK LKDQLAS EAAK+EAQ+EL K   + V+P
Sbjct: 55  EGLNQKKLGTRIADLESQLGQAQVELKVLKDQLASAEAAKKEAQDELVKKAVQSVVP 111



 Score = 65.5 bits (158), Expect(2) = 3e-26
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = -1

Query: 339 RERVSDVPQRQSSKVPFQVRTSGSDSNLLHQRPIVDRSSPKLGDRRSPRGSPTD 178
           R R S++PQRQS +   Q RTS SDS+ LH RPI DR SPKLGDRRSPRG+ ++
Sbjct: 3   RSRGSELPQRQSPRGAHQHRTSSSDSDPLHHRPIADR-SPKLGDRRSPRGTQSE 55


>ref|XP_003546766.1| PREDICTED: interactor of constitutive active ROPs 1-like isoform 1
           [Glycine max] gi|356556918|ref|XP_003546767.1|
           PREDICTED: interactor of constitutive active ROPs 1-like
           isoform 2 [Glycine max]
          Length = 380

 Score = 79.7 bits (195), Expect(2) = 7e-26
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = -2

Query: 176 DSLHQKKLGTRVADLESQLGQAQEQLKKLKDQLASTEAAKREAQEELEKNKKEPVIP 6
           + L+QKKLGTR+ADLESQLGQAQ +LK LKDQLAS EAAK+EAQ+EL K   + V+P
Sbjct: 55  EGLNQKKLGTRIADLESQLGQAQVELKVLKDQLASAEAAKKEAQDELVKKAVQSVLP 111



 Score = 64.7 bits (156), Expect(2) = 7e-26
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = -1

Query: 339 RERVSDVPQRQSSKVPFQVRTSGSDSNLLHQRPIVDRSSPKLGDRRSPRGSPTD 178
           R R S++PQRQS + P Q RTS SDS+ LH R I DR SPKLGDRRSPRG+ ++
Sbjct: 3   RSRGSELPQRQSPRGPHQHRTSSSDSDPLHHRLIADR-SPKLGDRRSPRGTQSE 55


>ref|XP_002300426.1| predicted protein [Populus trichocarpa] gi|222847684|gb|EEE85231.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 85.5 bits (210), Expect(2) = 7e-26
 Identities = 42/58 (72%), Positives = 51/58 (87%)
 Frame = -2

Query: 176 DSLHQKKLGTRVADLESQLGQAQEQLKKLKDQLASTEAAKREAQEELEKNKKEPVIPE 3
           DSL+QKKLGTR+ADLESQLGQAQ +LK LK+QLAS EAAK+EAQ+ELEK  ++  +PE
Sbjct: 55  DSLNQKKLGTRIADLESQLGQAQVELKTLKEQLASAEAAKKEAQKELEKKARKGAVPE 112



 Score = 58.9 bits (141), Expect(2) = 7e-26
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -1

Query: 339 RERVSDVPQRQSSKVPFQVRTSGSDSNLLHQRPIVDRSSPKLGDRRSPRGSPTD 178
           R R S++PQRQS +    +RTS SDS+ LH RPI DR   KLGDR SPRGS  D
Sbjct: 3   RSRGSEMPQRQSPRGSHPLRTSNSDSDPLHHRPITDRRE-KLGDRCSPRGSQPD 55


>emb|CAN73256.1| hypothetical protein VITISV_002134 [Vitis vinifera]
          Length = 376

 Score = 81.3 bits (199), Expect(2) = 9e-26
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = -2

Query: 176 DSLHQKKLGTRVADLESQLGQAQEQLKKLKDQLASTEAAKREAQEELEKNKKEPV 12
           DS++QKKLGTR+ADLESQLGQA E+LK LK QLAS EAAK+EAQEELEK    P+
Sbjct: 47  DSVNQKKLGTRIADLESQLGQALEELKNLKFQLASAEAAKKEAQEELEKKANMPI 101



 Score = 62.8 bits (151), Expect(2) = 9e-26
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = -1

Query: 321 VPQRQSSKVPFQVRTSGSDSNLLHQRPIVDRSSPKLGDRRSPRGSPTD 178
           +PQRQS +   Q+RTS SDS+ LH RPI DR SPK+GDRRSPRG+ +D
Sbjct: 1   MPQRQSPRGSLQLRTSSSDSDPLHHRPITDR-SPKVGDRRSPRGAQSD 47


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