BLASTX nr result

ID: Coptis25_contig00000368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000368
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517338.1| formate dehydrogenase, putative [Ricinus com...   657   0.0  
ref|XP_002278444.1| PREDICTED: formate dehydrogenase, mitochondr...   656   0.0  
emb|CAE12168.2| formate dehydrogenase [Quercus robur]                 655   0.0  
emb|CAN71454.1| hypothetical protein VITISV_036417 [Vitis vinifera]   654   0.0  
ref|XP_004141089.1| PREDICTED: formate dehydrogenase, mitochondr...   642   0.0  

>ref|XP_002517338.1| formate dehydrogenase, putative [Ricinus communis]
            gi|223543349|gb|EEF44880.1| formate dehydrogenase,
            putative [Ricinus communis]
          Length = 386

 Score =  657 bits (1694), Expect = 0.0
 Identities = 317/354 (89%), Positives = 337/354 (95%)
 Frame = -1

Query: 1335 ASPGGKKIVGVFYKANEYASMNPNFVGCVEGALGIRDWLESKGHEYIVTDDKDGPNCELE 1156
            AS G KKIVGVFYKANEYASMNPNF GC EGALGIRDWLES+GH+YIVTDDK+GP+CELE
Sbjct: 33   ASAGSKKIVGVFYKANEYASMNPNFSGCAEGALGIRDWLESQGHQYIVTDDKEGPHCELE 92

Query: 1155 KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLQXXXXAGLTVAEVTG 976
            KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDL+    AGLTVAEVTG
Sbjct: 93   KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLKAAAEAGLTVAEVTG 152

Query: 975  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAAISYRAYDLEGKTVGTVGAGRIGK 796
            SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVA I+YRAYDLEGKTVGTVGAGRIG+
Sbjct: 153  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAGIAYRAYDLEGKTVGTVGAGRIGR 212

Query: 795  LLLQRLKPFNCNLLYHDRVKMDPELESQIGAKFEEDLDAMLPKCDIIVINTPLTEKTKGM 616
            LLLQRLKPFNCNLLYHDR+KMDPELE+Q GAK+EEDLDAMLPKCDI+VINTPLTEKT+G+
Sbjct: 213  LLLQRLKPFNCNLLYHDRIKMDPELENQTGAKYEEDLDAMLPKCDIVVINTPLTEKTRGL 272

Query: 615  FNKEKISKCKRGVLIVNNARGAIMDAQAVADASSSGHIGGYSGDVWFPQPAPKDHPWRYM 436
            FNK++I+K K+GVLIVNNARGAIMD QAVADA SSGHIGGYSGDVW+PQPA KDHPWRYM
Sbjct: 273  FNKDRIAKLKKGVLIVNNARGAIMDTQAVADACSSGHIGGYSGDVWYPQPASKDHPWRYM 332

Query: 435  PNHAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEEFPEQNYIVKEGQLASQYR 274
            PN AMTPHISGTTIDAQLRYAAG KDMLDRYFKGEEFP QNYIVKEG+LASQY+
Sbjct: 333  PNQAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEEFPLQNYIVKEGKLASQYQ 386


>ref|XP_002278444.1| PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
            gi|296087673|emb|CBI34929.3| unnamed protein product
            [Vitis vinifera]
          Length = 383

 Score =  656 bits (1693), Expect = 0.0
 Identities = 317/354 (89%), Positives = 338/354 (95%)
 Frame = -1

Query: 1335 ASPGGKKIVGVFYKANEYASMNPNFVGCVEGALGIRDWLESKGHEYIVTDDKDGPNCELE 1156
            AS G KKIVGVFYKANEYA+MNPNFVGCVEGALGIRDWLES+GH+YIVTDDK+GP+CELE
Sbjct: 30   ASAGSKKIVGVFYKANEYAAMNPNFVGCVEGALGIRDWLESQGHQYIVTDDKEGPDCELE 89

Query: 1155 KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLQXXXXAGLTVAEVTG 976
            KHIPDLHVLI+TPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDL+    AGLTVAEVTG
Sbjct: 90   KHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLKAAAAAGLTVAEVTG 149

Query: 975  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAAISYRAYDLEGKTVGTVGAGRIGK 796
            SNVVSVAEDELMRILILVRNFLPG+HQVISG+WNVA I+YRAYDLEGKTVGTVGAGRIG+
Sbjct: 150  SNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGIAYRAYDLEGKTVGTVGAGRIGR 209

Query: 795  LLLQRLKPFNCNLLYHDRVKMDPELESQIGAKFEEDLDAMLPKCDIIVINTPLTEKTKGM 616
            LLLQRLKPFNCNLLYHDR+KMDPELE+QIGAKFEED+D MLPKCDIIVIN PLTEKTKGM
Sbjct: 210  LLLQRLKPFNCNLLYHDRIKMDPELENQIGAKFEEDVDVMLPKCDIIVINMPLTEKTKGM 269

Query: 615  FNKEKISKCKRGVLIVNNARGAIMDAQAVADASSSGHIGGYSGDVWFPQPAPKDHPWRYM 436
            FNKE+I+K K+GVLIVNNARGAIMD QAVADA SSGHI GYSGDVW+PQPAPKDHPWRYM
Sbjct: 270  FNKERIAKLKKGVLIVNNARGAIMDTQAVADACSSGHIAGYSGDVWYPQPAPKDHPWRYM 329

Query: 435  PNHAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEEFPEQNYIVKEGQLASQYR 274
            PN AMTPHISGTTIDAQLRYAAG KDMLDRYFKGE+FP Q+YIVKEGQLASQY+
Sbjct: 330  PNQAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEDFPAQHYIVKEGQLASQYQ 383


>emb|CAE12168.2| formate dehydrogenase [Quercus robur]
          Length = 372

 Score =  655 bits (1690), Expect = 0.0
 Identities = 316/354 (89%), Positives = 338/354 (95%)
 Frame = -1

Query: 1335 ASPGGKKIVGVFYKANEYASMNPNFVGCVEGALGIRDWLESKGHEYIVTDDKDGPNCELE 1156
            ASPG KKIVGVFYKANE A++NPNFVGCVEG+LGIRDWLES+GH+YIVTDDK+GPN ELE
Sbjct: 19   ASPGSKKIVGVFYKANENAALNPNFVGCVEGSLGIRDWLESQGHQYIVTDDKEGPNSELE 78

Query: 1155 KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLQXXXXAGLTVAEVTG 976
            KHIPDLHVLITTPFHPAYVTAERI KAKNLQLLLTAGIGSDHIDL     AGLTVAEVTG
Sbjct: 79   KHIPDLHVLITTPFHPAYVTAERITKAKNLQLLLTAGIGSDHIDLPAAAAAGLTVAEVTG 138

Query: 975  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAAISYRAYDLEGKTVGTVGAGRIGK 796
            SNVVSVAEDELMRILILVRNFLPGYHQ ISG+WNVAAIS+RAYDLEGKTVGTVGAGRIGK
Sbjct: 139  SNVVSVAEDELMRILILVRNFLPGYHQAISGEWNVAAISHRAYDLEGKTVGTVGAGRIGK 198

Query: 795  LLLQRLKPFNCNLLYHDRVKMDPELESQIGAKFEEDLDAMLPKCDIIVINTPLTEKTKGM 616
            LLLQRLKPFNCNLLYHDR+KMDPELE+QIGA FEEDLDAMLPKCDIIVINTPLT+KT+G+
Sbjct: 199  LLLQRLKPFNCNLLYHDRLKMDPELENQIGANFEEDLDAMLPKCDIIVINTPLTDKTRGL 258

Query: 615  FNKEKISKCKRGVLIVNNARGAIMDAQAVADASSSGHIGGYSGDVWFPQPAPKDHPWRYM 436
            F+K++I+KCK+GVLIVNNARGAIMD QAVADA SSGH+ GYSGDVWFPQPAPKDHPWRYM
Sbjct: 259  FDKDRIAKCKKGVLIVNNARGAIMDIQAVADACSSGHVAGYSGDVWFPQPAPKDHPWRYM 318

Query: 435  PNHAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEEFPEQNYIVKEGQLASQYR 274
            PNHAMTPHISGTTIDAQLRYAAGTKDML+RYFKGEEFP QNYIVK G+LASQY+
Sbjct: 319  PNHAMTPHISGTTIDAQLRYAAGTKDMLERYFKGEEFPSQNYIVKGGKLASQYQ 372


>emb|CAN71454.1| hypothetical protein VITISV_036417 [Vitis vinifera]
          Length = 383

 Score =  654 bits (1686), Expect = 0.0
 Identities = 316/354 (89%), Positives = 337/354 (95%)
 Frame = -1

Query: 1335 ASPGGKKIVGVFYKANEYASMNPNFVGCVEGALGIRDWLESKGHEYIVTDDKDGPNCELE 1156
            AS G KKIVGVFYKANEYA+MNPNFVGCVEGALGIR WLES+GH+YIVTDDK+GP+CELE
Sbjct: 30   ASAGSKKIVGVFYKANEYAAMNPNFVGCVEGALGIRXWLESQGHQYIVTDDKEGPDCELE 89

Query: 1155 KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLQXXXXAGLTVAEVTG 976
            KHIPDLHVLI+TPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDL+    AGLTVAEVTG
Sbjct: 90   KHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLKAAAAAGLTVAEVTG 149

Query: 975  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAAISYRAYDLEGKTVGTVGAGRIGK 796
            SNVVSVAEDELMRILILVRNFLPG+HQVISG+WNVA I+YRAYDLEGKTVGTVGAGRIG+
Sbjct: 150  SNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGIAYRAYDLEGKTVGTVGAGRIGR 209

Query: 795  LLLQRLKPFNCNLLYHDRVKMDPELESQIGAKFEEDLDAMLPKCDIIVINTPLTEKTKGM 616
            LLLQRLKPFNCNLLYHDR+KMDPELE+QIGAKFEED+D MLPKCDIIVIN PLTEKTKGM
Sbjct: 210  LLLQRLKPFNCNLLYHDRIKMDPELENQIGAKFEEDVDVMLPKCDIIVINMPLTEKTKGM 269

Query: 615  FNKEKISKCKRGVLIVNNARGAIMDAQAVADASSSGHIGGYSGDVWFPQPAPKDHPWRYM 436
            FNKE+I+K K+GVLIVNNARGAIMD QAVADA SSGHI GYSGDVW+PQPAPKDHPWRYM
Sbjct: 270  FNKERIAKLKKGVLIVNNARGAIMDTQAVADACSSGHIAGYSGDVWYPQPAPKDHPWRYM 329

Query: 435  PNHAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEEFPEQNYIVKEGQLASQYR 274
            PN AMTPHISGTTIDAQLRYAAG KDMLDRYFKGE+FP Q+YIVKEGQLASQY+
Sbjct: 330  PNQAMTPHISGTTIDAQLRYAAGVKDMLDRYFKGEDFPAQHYIVKEGQLASQYQ 383


>ref|XP_004141089.1| PREDICTED: formate dehydrogenase, mitochondrial-like [Cucumis
            sativus]
          Length = 384

 Score =  642 bits (1656), Expect = 0.0
 Identities = 308/354 (87%), Positives = 334/354 (94%)
 Frame = -1

Query: 1335 ASPGGKKIVGVFYKANEYASMNPNFVGCVEGALGIRDWLESKGHEYIVTDDKDGPNCELE 1156
            AS   KKIVGVFYKANEYA+MNPNFVGCVEGALGIR+WLES+GHEYIVTDDK+G + ELE
Sbjct: 31   ASAESKKIVGVFYKANEYAAMNPNFVGCVEGALGIREWLESQGHEYIVTDDKEGLDSELE 90

Query: 1155 KHIPDLHVLITTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHIDLQXXXXAGLTVAEVTG 976
            KHIPDLHVLITTPFHPAYVTAERIKKAKNL+LLLTAGIGSDH+DL     AGLTVAEVTG
Sbjct: 91   KHIPDLHVLITTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHVDLNAAAAAGLTVAEVTG 150

Query: 975  SNVVSVAEDELMRILILVRNFLPGYHQVISGDWNVAAISYRAYDLEGKTVGTVGAGRIGK 796
            SNVVSVAEDELMRILILVRNFLPGYHQV++G+WNVA I++RAYDLEGKTVGTVGAGRIGK
Sbjct: 151  SNVVSVAEDELMRILILVRNFLPGYHQVVNGEWNVAGIAHRAYDLEGKTVGTVGAGRIGK 210

Query: 795  LLLQRLKPFNCNLLYHDRVKMDPELESQIGAKFEEDLDAMLPKCDIIVINTPLTEKTKGM 616
            LLLQRLKPFNCNLLYHDR+K+DPELE QIGA+FEEDLDAMLPKCD++VINTPLT+KT+G+
Sbjct: 211  LLLQRLKPFNCNLLYHDRLKIDPELEKQIGAQFEEDLDAMLPKCDVLVINTPLTDKTRGL 270

Query: 615  FNKEKISKCKRGVLIVNNARGAIMDAQAVADASSSGHIGGYSGDVWFPQPAPKDHPWRYM 436
            FNKE+I+KCK+GVLIVNNARGAIMD QAV DA +SGH+GGYSGDVW PQPAPKDHPWRYM
Sbjct: 271  FNKERIAKCKKGVLIVNNARGAIMDTQAVVDACNSGHVGGYSGDVWNPQPAPKDHPWRYM 330

Query: 435  PNHAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEEFPEQNYIVKEGQLASQYR 274
            PN AMTPHISGTTIDAQLRYAAG KDML+RYFKGEEFP QNYIVKEGQLA QYR
Sbjct: 331  PNQAMTPHISGTTIDAQLRYAAGVKDMLERYFKGEEFPAQNYIVKEGQLAPQYR 384


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