BLASTX nr result

ID: Coptis25_contig00000350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000350
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894020.1| hypothetical protein ARALYDRAFT_473852 [Arab...    64   1e-08
ref|NP_001031151.1| uncharacterized protein [Arabidopsis thalian...    61   1e-07
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...    59   4e-07
ref|XP_002454603.1| hypothetical protein SORBIDRAFT_04g034170 [S...    59   4e-07
dbj|BAD17127.1| DCL protein-like [Oryza sativa Japonica Group] g...    58   7e-07

>ref|XP_002894020.1| hypothetical protein ARALYDRAFT_473852 [Arabidopsis lyrata subsp.
           lyrata] gi|297339862|gb|EFH70279.1| hypothetical protein
           ARALYDRAFT_473852 [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -3

Query: 231 SPEHEKTI*ERLLPYHSEFEKKIGCGVDYIKVW 133
           SPEHE+TI E LLPYH EFEKKIGCG+DYI VW
Sbjct: 130 SPEHERTIVEMLLPYHPEFEKKIGCGIDYIMVW 162


>ref|NP_001031151.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332193993|gb|AEE32114.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 231 SPEHEKTI*ERLLPYHSEFEKKIGCGVDYIKVW 133
           SPEHE+TI E LLPYH E EKKIGCG+DYI VW
Sbjct: 131 SPEHERTIIEMLLPYHPECEKKIGCGIDYIMVW 163


>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/31 (87%), Positives = 27/31 (87%)
 Frame = -3

Query: 228 PEHEKTI*ERLLPYHSEFEKKIGCGVDYIKV 136
           PEHEKTI ERLLPYH E EKKIGCGVDYI V
Sbjct: 136 PEHEKTILERLLPYHPESEKKIGCGVDYITV 166


>ref|XP_002454603.1| hypothetical protein SORBIDRAFT_04g034170 [Sorghum bicolor]
           gi|241934434|gb|EES07579.1| hypothetical protein
           SORBIDRAFT_04g034170 [Sorghum bicolor]
          Length = 236

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 231 SPEHEKTI*ERLLPYHSEFEKKIGCGVDYIKV 136
           SPEHEK I ERLLPYH E++KKIGCG+DYI V
Sbjct: 149 SPEHEKAILERLLPYHPEYDKKIGCGIDYITV 180


>dbj|BAD17127.1| DCL protein-like [Oryza sativa Japonica Group]
           gi|46806067|dbj|BAD17315.1| DCL protein-like [Oryza
           sativa Japonica Group]
          Length = 107

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 231 SPEHEKTI*ERLLPYHSEFEKKIGCGVDYIKV 136
           SPEHEK I ERLLPYH ++EKKIGCG+DY+ V
Sbjct: 15  SPEHEKAILERLLPYHPQYEKKIGCGIDYLTV 46


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