BLASTX nr result

ID: Coptis25_contig00000338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000338
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26171.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252...   374   e-101
ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ric...   370   e-100
emb|CBI32341.3| unnamed protein product [Vitis vinifera]              367   3e-99
emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]   367   3e-99

>emb|CBI26171.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  379 bits (974), Expect = e-103
 Identities = 180/239 (75%), Positives = 203/239 (84%)
 Frame = -3

Query: 1044 MSSSQCCENPPTLNPACGAGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 865
            MS  QCCE+PP+LNP  G+GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+PN RKLA
Sbjct: 1    MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEAPNFRKLA 60

Query: 864  DKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKPVIAALKRKGIST 685
            DK+AAAGFYVV PDF++GD Y P+ AERP  VWIK HG DKG E+ KPVI ALK KG+S 
Sbjct: 61   DKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEALKSKGVSA 120

Query: 684  IGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVLGAEIDQMSPPEL 505
            IGAAGFCWGAKVVV+LAKS YI+AAVL HPSFV++DDIK V  P AVLGAEIDQMSPP L
Sbjct: 121  IGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLGAEIDQMSPPAL 180

Query: 504  VKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 328
            VKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQDML WF+KYVK
Sbjct: 181  VKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQDMLGWFSKYVK 239


>ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252854 [Vitis vinifera]
          Length = 505

 Score =  374 bits (959), Expect = e-101
 Identities = 180/243 (74%), Positives = 203/243 (83%), Gaps = 4/243 (1%)
 Frame = -3

Query: 1044 MSSSQCCENPPTLNPACGAGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 865
            MS  QCCE+PP+LNP  G+GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+PN RKLA
Sbjct: 263  MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEAPNFRKLA 322

Query: 864  DKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKPVIAALKRKGIST 685
            DK+AAAGFYVV PDF++GD Y P+ AERP  VWIK HG DKG E+ KPVI ALK KG+S 
Sbjct: 323  DKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEALKSKGVSA 382

Query: 684  IGAAGFCWG----AKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVLGAEIDQMS 517
            IGAAGFCWG    AKVVV+LAKS YI+AAVL HPSFV++DDIK V  P AVLGAEIDQMS
Sbjct: 383  IGAAGFCWGGILAAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLGAEIDQMS 442

Query: 516  PPELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTK 337
            PP LVKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQDML WF+K
Sbjct: 443  PPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQDMLGWFSK 502

Query: 336  YVK 328
            YVK
Sbjct: 503  YVK 505



 Score =  307 bits (787), Expect = 2e-81
 Identities = 149/240 (62%), Positives = 181/240 (75%), Gaps = 3/240 (1%)
 Frame = -3

Query: 1044 MSSSQCCENPPTLNPACGAGHVEQIGG---LSSYISASSHSKLGVLLVSDIFGYESPNLR 874
            MS S+C ENPP+ +P  GAG V+++GG   L +Y++    SKL +L VSD+FGYE+PNLR
Sbjct: 1    MSISRCYENPPSFSPGSGAGTVQEVGGGGRLKAYVTGPLDSKLAILFVSDVFGYEAPNLR 60

Query: 873  KLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKPVIAALKRKG 694
            KLADK+AAAGF VV PDF +GDP +        QVWI  HG DKG E+AK VIAAL+ KG
Sbjct: 61   KLADKVAAAGFLVVAPDFFYGDPVDLSNPNFDRQVWIAAHGTDKGCEDAKAVIAALRSKG 120

Query: 693  ISTIGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVLGAEIDQMSP 514
            +S IGAAGFCWG KVVV LA SD+I+AAV+ HP  +T D+I +V  PIA+LGAEID  SP
Sbjct: 121  VSAIGAAGFCWGGKVVVNLASSDHIQAAVVLHPGRITDDEINEVKTPIAILGAEIDDASP 180

Query: 513  PELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKY 334
            PE ++ F E+LSAK  +D FVKIFPGVAHGWTVRY  EDE  VK A+EAH DML+WF+KY
Sbjct: 181  PEQLEHFGEILSAKSGIDCFVKIFPGVAHGWTVRYSVEDEWGVKSAEEAHGDMLNWFSKY 240


>ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ricinus communis]
            gi|223535996|gb|EEF37655.1|
            endo-1,3-1,4-beta-d-glucanase, putative [Ricinus
            communis]
          Length = 239

 Score =  370 bits (949), Expect = e-100
 Identities = 172/239 (71%), Positives = 205/239 (85%)
 Frame = -3

Query: 1044 MSSSQCCENPPTLNPACGAGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 865
            MS SQCCENPPTL+   G G V +IGGL  Y +  S  K  ++L+SDIFG+E+PNLRKLA
Sbjct: 1    MSGSQCCENPPTLSSGSGIGSVTEIGGLKVYATGPSDCKRSIVLISDIFGWEAPNLRKLA 60

Query: 864  DKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKPVIAALKRKGIST 685
            DK+AAAGFYVVVPDF +GDPY PE A+RPL +WIK+HG DKG E+AKP+IAALK KG+S 
Sbjct: 61   DKVAAAGFYVVVPDFFYGDPYVPENADRPLPIWIKSHGTDKGFEDAKPIIAALKSKGVSA 120

Query: 684  IGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVLGAEIDQMSPPEL 505
            IGAAGFCWGAKVVV+LAKSD I+AAVL HPSFVTVDDIK++  PIA+LGAEID +SPP L
Sbjct: 121  IGAAGFCWGAKVVVELAKSDPIQAAVLLHPSFVTVDDIKEIKEPIAILGAEIDHLSPPTL 180

Query: 504  VKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 328
            +KQF+EVLSA+PE++ +VKIFPGVAHGWTVRYK EDE AV+CA+EAH+DMLDWF +YV+
Sbjct: 181  LKQFEEVLSARPEINGYVKIFPGVAHGWTVRYKTEDEKAVECAEEAHKDMLDWFAEYVQ 239


>emb|CBI32341.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  367 bits (942), Expect = 3e-99
 Identities = 173/240 (72%), Positives = 206/240 (85%)
 Frame = -3

Query: 1047 DMSSSQCCENPPTLNPACGAGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKL 868
            +MS SQCCENPP L   CG G V ++GGL +Y++  S SK  +LLVSDIFGYE+P  RKL
Sbjct: 18   NMSDSQCCENPPNLTSICGGGSVIEVGGLKAYVAGPSDSKHAILLVSDIFGYEAPKFRKL 77

Query: 867  ADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKPVIAALKRKGIS 688
            ADK+AAAGFYVVVPDF +GDP+  +I E+P++VW ++HG DKG E+AKPVIAALK KGIS
Sbjct: 78   ADKVAAAGFYVVVPDFFYGDPFVFDIPEKPIEVWRESHGTDKGFEDAKPVIAALKSKGIS 137

Query: 687  TIGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVLGAEIDQMSPPE 508
            TIGAAGFCWGAKVVV+LAKSDYI++AVL HPS VTVDDIK+V APIAVLGAEID+ SPPE
Sbjct: 138  TIGAAGFCWGAKVVVELAKSDYIQSAVLLHPSRVTVDDIKEVKAPIAVLGAEIDKASPPE 197

Query: 507  LVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 328
            L+KQF+EVLS KPEV+ +VKIFPGV HGW+VRYKDE+E  VK A+EAHQ+M+DWFT+YVK
Sbjct: 198  LLKQFEEVLSTKPEVNSYVKIFPGVVHGWSVRYKDENEIEVKSAEEAHQNMVDWFTRYVK 257


>emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]
          Length = 251

 Score =  367 bits (941), Expect = 3e-99
 Identities = 179/251 (71%), Positives = 205/251 (81%), Gaps = 12/251 (4%)
 Frame = -3

Query: 1044 MSSSQCCENPPTLNPACGAGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYES------- 886
            MS  QCCE+PP+LNP  G+GHVEQ+GGLS YI+ S HSKL +LLVSDI+GY +       
Sbjct: 1    MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYNTNCFSCMA 60

Query: 885  --PNL---RKLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDKGAEEAKP 721
              P++   +KLADK+AAAGFYVV PDF++GDPY P+ AERPL VWIK HG DKG E+ KP
Sbjct: 61   SKPDIMKNKKLADKVAAAGFYVVAPDFLYGDPYVPDKAERPLPVWIKDHGMDKGFEDTKP 120

Query: 720  VIAALKRKGISTIGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVNAPIAVL 541
            VI ALK KG+S IGAAGFCWGAKVVV+LAKS YI+AAVL HPSFV++DDIK V  P AVL
Sbjct: 121  VIEALKSKGVSAIGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVL 180

Query: 540  GAEIDQMSPPELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQ 361
            GAEIDQMSPP LVKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQ
Sbjct: 181  GAEIDQMSPPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQ 240

Query: 360  DMLDWFTKYVK 328
            DML WF+KYVK
Sbjct: 241  DMLGWFSKYVK 251


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