BLASTX nr result

ID: Coptis25_contig00000328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000328
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23666.3| unnamed protein product [Vitis vinifera]              220   2e-55
emb|CBI25584.3| unnamed protein product [Vitis vinifera]              219   4e-55
ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like ...   217   3e-54
ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like ...   216   5e-54
gb|ABA40467.1| glycoprotein-like protein [Solanum tuberosum]          216   6e-54

>emb|CBI23666.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  220 bits (561), Expect = 2e-55
 Identities = 117/159 (73%), Positives = 125/159 (78%), Gaps = 7/159 (4%)
 Frame = +1

Query: 22  LSPQKP*NPLHS-------YSLQHSKMPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQN 180
           LSP  P  PL S        S   + MPFKRYVE+GRVALVNYGKDYG+         QN
Sbjct: 61  LSPVSPSTPLASSIFPLPAVSRALANMPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQN 120

Query: 181 RALVDAPDMVRSQMNFKRLSLTDIKIDIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLI 360
           RALVDAPDMVR QMNFKRLSLTDIKIDI RVPKKK+LI+AM AADVKNKWE SSWGRKLI
Sbjct: 121 RALVDAPDMVRCQMNFKRLSLTDIKIDIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLI 180

Query: 361 VQKRRVSLNDFDRFKLMVAKIKRASAIRQELAKLKKQSA 477
           VQKRR SLNDFDRFK+M+AKIKR   IRQELAKLKKQ+A
Sbjct: 181 VQKRRASLNDFDRFKIMLAKIKRGGVIRQELAKLKKQTA 219


>emb|CBI25584.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score =  219 bits (559), Expect = 4e-55
 Identities = 112/143 (78%), Positives = 121/143 (84%)
 Frame = +1

Query: 49  LHSYSLQHSKMPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNF 228
           L + S   +KMPFKRYVEIGRVALVNYGK+YG+         QNRALVDAPDMVR QMNF
Sbjct: 36  LSALSHAQAKMPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNF 95

Query: 229 KRLSLTDIKIDIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKL 408
           KRLSLTDIKIDI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+
Sbjct: 96  KRLSLTDIKIDIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKI 155

Query: 409 MVAKIKRASAIRQELAKLKKQSA 477
           M+AKIKR   IRQELAKLKKQ+A
Sbjct: 156 MLAKIKRGGVIRQELAKLKKQTA 178


>ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera]
          Length = 134

 Score =  217 bits (552), Expect = 3e-54
 Identities = 109/133 (81%), Positives = 116/133 (87%)
 Frame = +1

Query: 79  MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 258
           MPFKRYVE+GRVALVNYGKDYG+         QNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60

Query: 259 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 438
           DI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+M+AKIKR   
Sbjct: 61  DIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120

Query: 439 IRQELAKLKKQSA 477
           IRQELAKLKKQ+A
Sbjct: 121 IRQELAKLKKQTA 133


>ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera]
          Length = 134

 Score =  216 bits (550), Expect = 5e-54
 Identities = 109/133 (81%), Positives = 116/133 (87%)
 Frame = +1

Query: 79  MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 258
           MPFKRYVEIGRVALVNYGK+YG+         QNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60

Query: 259 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 438
           DI RVPKKK+LI+AM AADVKNKWE SSWGRKLIVQKRR SLNDFDRFK+M+AKIKR   
Sbjct: 61  DIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120

Query: 439 IRQELAKLKKQSA 477
           IRQELAKLKKQ+A
Sbjct: 121 IRQELAKLKKQTA 133


>gb|ABA40467.1| glycoprotein-like protein [Solanum tuberosum]
          Length = 134

 Score =  216 bits (549), Expect = 6e-54
 Identities = 109/133 (81%), Positives = 116/133 (87%)
 Frame = +1

Query: 79  MPFKRYVEIGRVALVNYGKDYGQXXXXXXXXXQNRALVDAPDMVRSQMNFKRLSLTDIKI 258
           MPFKR+VEIGRVALVNYGKDYG+         QNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 259 DIPRVPKKKSLIQAMEAADVKNKWEKSSWGRKLIVQKRRVSLNDFDRFKLMVAKIKRASA 438
           DI R+PKKK+LI AMEAADVK KWE SSWGRKLIVQKRR SLNDFDRFKLM+AKIKRA  
Sbjct: 61  DIKRIPKKKTLIAAMEAADVKTKWESSSWGRKLIVQKRRASLNDFDRFKLMLAKIKRAGV 120

Query: 439 IRQELAKLKKQSA 477
           +RQELAKLKK+ A
Sbjct: 121 VRQELAKLKKEVA 133


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