BLASTX nr result
ID: Coptis25_contig00000310
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00000310
(590 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515369.1| DNA binding protein, putative [Ricinus commu... 96 5e-18
ref|NP_567162.2| putative B3 domain-containing protein REM15 [Ar... 90 2e-16
dbj|BAC42177.1| unknown protein [Arabidopsis thaliana] 84 2e-14
ref|NP_001189594.1| Transcriptional factor B3 family protein [Ar... 84 2e-14
gb|AAD23895.1| hypothetical protein [Arabidopsis thaliana] 84 2e-14
>ref|XP_002515369.1| DNA binding protein, putative [Ricinus communis]
gi|223545313|gb|EEF46818.1| DNA binding protein,
putative [Ricinus communis]
Length = 368
Score = 95.9 bits (237), Expect = 5e-18
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDV---VGSDDEKMEKVQTKEKNKKFTKNSPS- 170
LVF+HEG + F+V +FDP+ACE+EY +V + + +E+ E +T + +KFTKN
Sbjct: 76 LVFRHEGDMVFYVMVFDPSACEREYTSFNVKEEMETSEEEKEPAKTSDL-RKFTKNKQIM 134
Query: 171 -SKVTRMAREVKEPPHFAVTLRAYNFKG-----SIMY-----IPAKFGRDNGLTNRAEVM 317
S + V E PHFAV + +Y +Y IP KF NGL NR +
Sbjct: 135 ISVEGKGNPPVFENPHFAVNMTSYTASHPRKPLKFIYLFKQNIPKKFAEANGLYNRYCKI 194
Query: 318 TLKDPIGKAWKVYLRYKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLL 464
L D ++W L YK + G Y+++ W F +N LK GD F+L+
Sbjct: 195 VLVDQESRSWLADLGYKKADGTVYVKDGWSTFCIANDLKKGDSFIFELI 243
>ref|NP_567162.2| putative B3 domain-containing protein REM15 [Arabidopsis thaliana]
gi|238065256|sp|O23076.2|REM15_ARATH RecName:
Full=Putative B3 domain-containing protein REM15;
AltName: Full=Protein REPRODUCTIVE MERISTEM 15
gi|332656447|gb|AEE81847.1| putative B3
domain-containing protein REM15 [Arabidopsis thaliana]
Length = 528
Score = 90.1 bits (222), Expect = 2e-16
Identities = 51/156 (32%), Positives = 78/156 (50%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEKMEKVQTKEKNKKFTKNSPSSKVT 182
+VF+ E L FHV + P+ C +Y V EK ++ KK K +P+ +
Sbjct: 77 VVFRQESDLAFHVTLLGPSCCGIQYGSCSV--------EKNNLGDEKKK-VKENPNGEAE 127
Query: 183 RMAREVKEPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLR 362
+R+ P F + + + +M P F RDNG+ E++ + + G++W LR
Sbjct: 128 SSSRD---PSCFVANVAPSSLRYDLMRFPRGFVRDNGVVGSGEIVLMNEK-GRSWNFNLR 183
Query: 363 YKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSR 470
KPS G Y+R W+ F D+N LK GD TFKL+ R
Sbjct: 184 QKPSNGTVYVRGGWVSFCDANGLKAGDNYTFKLIKR 219
Score = 70.1 bits (170), Expect = 3e-10
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Frame = +3
Query: 6 VFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEK-MEKVQTKEKNKKFTKNSPSSKVT 182
+ K G L + +P E L + SD E+ +EK+Q KEK KK VT
Sbjct: 216 LIKRAGTLVLRLLPNEPKEEANEVSLPEEPESDAERNLEKIQRKEKVKK--------NVT 267
Query: 183 RMAREVKEPPH-FAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYL 359
R A + P F + + + +Y+P +F R+NG+ R M L + GK+W + L
Sbjct: 268 REAESSSQDPSCFVANVSPSSLRYDTLYLPKRFMRENGVDKRCGEMILINEKGKSWTLDL 327
Query: 360 RYKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSR 470
+ K S G I+ W F +N L+ G T KL+ +
Sbjct: 328 KVKKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKK 364
>dbj|BAC42177.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 83.6 bits (205), Expect = 2e-14
Identities = 49/157 (31%), Positives = 79/157 (50%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEKMEKVQTKEKNKKFTKNSPSSKVT 182
+VF+ E + FHV + P+ CE +Y SD+E+ EK K + SS +
Sbjct: 77 VVFRQERDMSFHVTMLGPSCCEIQYGSC----SDEER-----NLEKKKNPNGEAKSSSL- 126
Query: 183 RMAREVKEPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLR 362
+P F+ + + + +M P F R+NG+ +++ + + G++W LR
Sbjct: 127 -------DPSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLR 178
Query: 363 YKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSRG 473
KPS G Y+R W+ F D+N L+ GD TFKL+ RG
Sbjct: 179 QKPSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRG 215
Score = 58.9 bits (141), Expect = 6e-07
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +3
Query: 204 EPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGM 383
+P F + + +Y+P +F R+NG+ R M L + GK+W + L+ K S G
Sbjct: 233 DPSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGT 292
Query: 384 CYIRNDWLHFADSNKLKLGDGCTFKLLSR 470
IR W F +N L+ G TFKL+ +
Sbjct: 293 SLIRRGWRSFCSANGLRAGSIITFKLIKK 321
>ref|NP_001189594.1| Transcriptional factor B3 family protein [Arabidopsis thaliana]
gi|322510067|sp|Q8GYM4.2|REM14_ARATH RecName: Full=B3
domain-containing protein REM14; AltName: Full=Protein
REPRODUCTIVE MERISTEM 14 gi|330252515|gb|AEC07609.1|
Transcriptional factor B3 family protein [Arabidopsis
thaliana]
Length = 490
Score = 83.6 bits (205), Expect = 2e-14
Identities = 49/157 (31%), Positives = 79/157 (50%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEKMEKVQTKEKNKKFTKNSPSSKVT 182
+VF+ E + FHV + P+ CE +Y SD+E+ EK K + SS +
Sbjct: 77 VVFRQERDMSFHVTMLGPSCCEIQYGSC----SDEER-----NLEKKKNPNGEAKSSSL- 126
Query: 183 RMAREVKEPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLR 362
+P F+ + + + +M P F R+NG+ +++ + + G++W LR
Sbjct: 127 -------DPSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLR 178
Query: 363 YKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSRG 473
KPS G Y+R W+ F D+N L+ GD TFKL+ RG
Sbjct: 179 QKPSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRG 215
Score = 58.9 bits (141), Expect = 6e-07
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +3
Query: 204 EPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGM 383
+P F + + +Y+P +F R+NG+ R M L + GK+W + L+ K S G
Sbjct: 233 DPSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGT 292
Query: 384 CYIRNDWLHFADSNKLKLGDGCTFKLLSR 470
IR W F +N L+ G TFKL+ +
Sbjct: 293 SLIRRGWRSFCSANGLRAGSIITFKLIKK 321
>gb|AAD23895.1| hypothetical protein [Arabidopsis thaliana]
Length = 1440
Score = 83.6 bits (205), Expect = 2e-14
Identities = 49/157 (31%), Positives = 79/157 (50%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEKMEKVQTKEKNKKFTKNSPSSKVT 182
+VF+ E + FHV + P+ CE +Y SD+E+ EK K + SS +
Sbjct: 1027 VVFRQERDMSFHVTMLGPSCCEIQYGSC----SDEER-----NLEKKKNPNGEAKSSSL- 1076
Query: 183 RMAREVKEPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLR 362
+P F+ + + + +M P F R+NG+ +++ + + G++W LR
Sbjct: 1077 -------DPSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEK-GRSWNFNLR 1128
Query: 363 YKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSRG 473
KPS G Y+R W+ F D+N L+ GD TFKL+ RG
Sbjct: 1129 QKPSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRG 1165
Score = 58.9 bits (141), Expect = 6e-07
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +3
Query: 204 EPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLRYKPSQGM 383
+P F + + +Y+P +F R+NG+ R M L + GK+W + L+ K S G
Sbjct: 1183 DPSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGT 1242
Query: 384 CYIRNDWLHFADSNKLKLGDGCTFKLLSR 470
IR W F +N L+ G TFKL+ +
Sbjct: 1243 SLIRRGWRSFCSANGLRAGSIITFKLIKK 1271
Score = 58.2 bits (139), Expect = 1e-06
Identities = 42/157 (26%), Positives = 67/157 (42%)
Frame = +3
Query: 3 LVFKHEGGLKFHVRIFDPTACEKEYPLLDVVGSDDEKMEKVQTKEKNKKFTKNSPSSKVT 182
+ F++ G L FHV P E E+ +DE ++ + K +++ S SS
Sbjct: 78 VAFRYVGNLVFHVSNLGPNYYEIEH--------NDELPKEKKAKTNSEEADAVSSSSSAD 129
Query: 183 RMAREVKEPPHFAVTLRAYNFKGSIMYIPAKFGRDNGLTNRAEVMTLKDPIGKAWKVYLR 362
+ F + A + +Y+P F NGLT + + L D ++ + LR
Sbjct: 130 KSC--------FMAIITALDLTTDTLYLPLHFTSANGLTRKNREIILTDGGERSRVLDLR 181
Query: 363 YKPSQGMCYIRNDWLHFADSNKLKLGDGCTFKLLSRG 473
+ S G YI W +F D N K G FKL+ +G
Sbjct: 182 FDESSGTFYISRGWRNFCDENGQKAGGFFLFKLVGKG 218