BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000289
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19566.3| unnamed protein product [Vitis vinifera]              282   8e-74
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   282   8e-74
emb|CBI32444.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   275   1e-71
emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]   275   1e-71

>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  282 bits (722), Expect = 8e-74
 Identities = 147/219 (67%), Positives = 162/219 (73%)
 Frame = +3

Query: 6   AKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATGHQQQY 185
           AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPRK++G+QQQY
Sbjct: 113 AKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQY 172

Query: 186 SSQALVLVGGYASNGASAQTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPV 365
           SS      GGYASNGAS Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPV
Sbjct: 173 SSH-----GGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 227

Query: 366 GKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXX 545
           GKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLSWGRNPANKQ R D            
Sbjct: 228 GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGG 287

Query: 546 XXXXXXXXAPATSQDPNXXXXXXXXXXXPVYGNPQQQVS 662
                   A     DP            PVYGN QQQVS
Sbjct: 288 QVYDGYGYALPPPHDPT--MYAAAYGAYPVYGNHQQQVS 324


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score =  282 bits (722), Expect = 8e-74
 Identities = 147/219 (67%), Positives = 162/219 (73%)
 Frame = +3

Query: 6   AKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATGHQQQY 185
           AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPRK++G+QQQY
Sbjct: 207 AKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQY 266

Query: 186 SSQALVLVGGYASNGASAQTDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSVKIPV 365
           SS      GGYASNGAS Q+D DS NTTIFVGGLDP ++DEDLRQPFSQYGE+VSVKIPV
Sbjct: 267 SSH-----GGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 321

Query: 366 GKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLSWGRNPANKQSRTDSXXXXXXXXXXX 545
           GKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLSWGRNPANKQ R D            
Sbjct: 322 GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGG 381

Query: 546 XXXXXXXXAPATSQDPNXXXXXXXXXXXPVYGNPQQQVS 662
                   A     DP            PVYGN QQQVS
Sbjct: 382 QVYDGYGYALPPPHDPT--MYAAAYGAYPVYGNHQQQVS 418


>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  275 bits (704), Expect = 1e-71
 Identities = 138/173 (79%), Positives = 154/173 (89%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   GAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATGHQQQ 182
           GAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+KA+G+QQQ
Sbjct: 131 GAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQ 190

Query: 183 YSSQALVLVGGYASNGASAQ---TDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSV 353
           YSSQALVL GG ASNGA AQ    + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSV
Sbjct: 191 YSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSV 250

Query: 354 KIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 512
           KIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 251 KIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 416

 Score =  275 bits (704), Expect = 1e-71
 Identities = 138/173 (79%), Positives = 154/173 (89%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   GAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATGHQQQ 182
           GAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+KA+G+QQQ
Sbjct: 205 GAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQ 264

Query: 183 YSSQALVLVGGYASNGASAQ---TDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSV 353
           YSSQALVL GG ASNGA AQ    + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSV
Sbjct: 265 YSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSV 324

Query: 354 KIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 512
           KIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 325 KIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 377


>emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
          Length = 434

 Score =  275 bits (704), Expect = 1e-71
 Identities = 138/173 (79%), Positives = 154/173 (89%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   GAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPRKATGHQQQ 182
           GAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+KA+G+QQQ
Sbjct: 223 GAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQ 282

Query: 183 YSSQALVLVGGYASNGASAQ---TDDDSANTTIFVGGLDPTITDEDLRQPFSQYGEVVSV 353
           YSSQALVL GG ASNGA AQ    + DS NTTIFVGGLD  +TDEDLRQ FSQ+GEVVSV
Sbjct: 283 YSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSV 342

Query: 354 KIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLSWGRNPANKQSRTDS 512
           KIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLSWGRNPA+KQ R DS
Sbjct: 343 KIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 395