BLASTX nr result

ID: Coptis25_contig00000251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000251
         (1717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61111.1| hypothetical protein VITISV_006466 [Vitis vinifera]   296   1e-77
ref|XP_002285064.1| PREDICTED: probable carboxylesterase 2 [Viti...   295   3e-77
ref|XP_002285067.1| PREDICTED: probable carboxylesterase 2-like ...   289   1e-75
gb|ABB89010.1| CXE carboxylesterase [Malus pumila]                    289   2e-75
ref|XP_003608006.1| Gibberellin receptor GID1 [Medicago truncatu...   283   1e-73

>emb|CAN61111.1| hypothetical protein VITISV_006466 [Vitis vinifera]
          Length = 323

 Score =  296 bits (757), Expect = 1e-77
 Identities = 146/271 (53%), Positives = 189/271 (69%), Gaps = 11/271 (4%)
 Frame = +3

Query: 141 TADDIVFEYPPFIRVYKDGRKERLREDVFVAASVDPSTGVSSKDVVIQPETGLSARMYLP 320
           T  ++ F +PPF+RV+KDG+ ER      V  S++  TGV+SKD+VI+PETG+SAR+Y+P
Sbjct: 5   TNPELSFNFPPFLRVFKDGKVERFVGTDSVPPSLNIETGVNSKDIVIEPETGVSARLYIP 64

Query: 321 KGANPKTKLPLVIYYHGGGFCIESAFCPTYHNYLNLLVSKANVVAVSVDYRRAPEYPLPI 500
           K  +   KLPL++Y+HGG FCIE++  PTYHNYL+ LV++ANVVAVS++YRRAPE+PLP+
Sbjct: 65  KINDQSQKLPLLVYFHGGAFCIETSSSPTYHNYLDSLVAEANVVAVSIEYRRAPEHPLPV 124

Query: 501 AYEDSWTALKWVFSHPD----EEWLTKYADYDRVYMAGDSAGGNISHNMAVRAHI---EP 659
           AY+D W A+KWV SH +    E WL  YAD D ++ AGDSAG N+SHNMA+RA     E 
Sbjct: 125 AYDDCWAAVKWVVSHSNSQGPEPWLNDYADLDXLFFAGDSAGANLSHNMAIRAGTRGHEL 184

Query: 660 NNFKFKGIVLAHPYFIGSTPLASE----GDMDLLGKLWLAVYPTTSGLDDPLVNPFKDPN 827
            + K  GI+L HPYF G  P+ +E        L+  LWL V PTTSG DDPL+NP  DP 
Sbjct: 185 GSVKVSGIILIHPYFWGKDPVGAEVKDLQKKGLVDSLWLFVCPTTSGCDDPLINPATDPK 244

Query: 828 FSKVACKRVLVCVAGLDVLVHRGKHYHENLG 920
            + + C+RVLV VA  D L  RG  YHE LG
Sbjct: 245 LASLGCQRVLVFVAEKDTLRDRGWFYHETLG 275


>ref|XP_002285064.1| PREDICTED: probable carboxylesterase 2 [Vitis vinifera]
          Length = 323

 Score =  295 bits (755), Expect = 3e-77
 Identities = 146/271 (53%), Positives = 188/271 (69%), Gaps = 11/271 (4%)
 Frame = +3

Query: 141 TADDIVFEYPPFIRVYKDGRKERLREDVFVAASVDPSTGVSSKDVVIQPETGLSARMYLP 320
           T  ++ F +PPF+RV+KDG+ ER      V  S++  TGV+SKD+VI PETG+SAR+Y+P
Sbjct: 5   TNPELSFNFPPFLRVFKDGKVERFVGTDSVPPSLNIETGVNSKDIVIDPETGVSARLYIP 64

Query: 321 KGANPKTKLPLVIYYHGGGFCIESAFCPTYHNYLNLLVSKANVVAVSVDYRRAPEYPLPI 500
           K  +   KLPL++Y+HGG FCIE+   PTYHNYL+ LV++ANVVAVS++YRRAPE+PLP+
Sbjct: 65  KINDQSQKLPLLVYFHGGAFCIETFSSPTYHNYLDSLVAEANVVAVSIEYRRAPEHPLPV 124

Query: 501 AYEDSWTALKWVFSHPD----EEWLTKYADYDRVYMAGDSAGGNISHNMAVRAHI---EP 659
           AY+D W A+KW+ SH +    E WL  YAD DR++ AGDSAG N+SHNMA+RA     E 
Sbjct: 125 AYDDCWAAVKWLVSHSNSQGPEPWLNDYADLDRLFFAGDSAGANLSHNMAIRAGTRGHEL 184

Query: 660 NNFKFKGIVLAHPYFIGSTPLASE----GDMDLLGKLWLAVYPTTSGLDDPLVNPFKDPN 827
            + K  GI+L HPYF G  P+ +E        L+  LWL V PTTSG DDPL+NP  DP 
Sbjct: 185 GSVKVSGIILIHPYFWGKDPVGAEVKDLQKKGLVDSLWLFVCPTTSGCDDPLINPATDPK 244

Query: 828 FSKVACKRVLVCVAGLDVLVHRGKHYHENLG 920
            + + C+RVLV VA  D L  RG  YHE LG
Sbjct: 245 LASLGCQRVLVFVAEKDTLRDRGWFYHETLG 275


>ref|XP_002285067.1| PREDICTED: probable carboxylesterase 2-like [Vitis vinifera]
          Length = 322

 Score =  289 bits (740), Expect = 1e-75
 Identities = 143/269 (53%), Positives = 187/269 (69%), Gaps = 12/269 (4%)
 Frame = +3

Query: 150 DIVFEYPPFIRVYKDGRKERLREDVFVAASVDPSTGVSSKDVVIQPETGLSARMYLPKGA 329
           ++ F +PPF+RV+KDGR ER   +  V  S++   GV SKD+VI+PETG+SAR+Y+PK  
Sbjct: 8   ELTFNFPPFLRVFKDGRVERFLGNDTVPPSLNVENGVHSKDIVIEPETGISARLYIPKIT 67

Query: 330 NPKTKLPLVIYYHGGGFCIESAFCPTYHNYLNLLVSKANVVAVSVDYRRAPEYPLPIAYE 509
            P  KLPL+IY+HGGGFCIE++  PTYHNYL+ LV++ NVVAVSV+YRRAPE PLP+AY+
Sbjct: 68  YPSQKLPLLIYFHGGGFCIETSSSPTYHNYLDSLVAEGNVVAVSVNYRRAPEDPLPVAYD 127

Query: 510 DSWTALKWVFSHPD----EEWLTKYADYDRVYMAGDSAGGNISHNMAVRAHIEPNNF--- 668
           D WTA KWV SH +    E WL  +AD++ +++AGD AG N++HNMA+RA    N     
Sbjct: 128 DCWTAFKWVVSHSNSQGLEPWLNDHADFNHLFLAGDDAGANLAHNMAIRAGTRVNELGGV 187

Query: 669 KFKGIVLAHPYFIGSTPLASEGDMDLLGK-----LWLAVYPTTSGLDDPLVNPFKDPNFS 833
           K  GI+L HPYF G  P+ SE + DL  K     LW  V PTTSG DDPL+NP  DP   
Sbjct: 188 KVSGIILVHPYFWGKDPIGSEMN-DLQKKARVDTLWHFVCPTTSGCDDPLINPATDPQLR 246

Query: 834 KVACKRVLVCVAGLDVLVHRGKHYHENLG 920
            + C++VL+ +A  D+L  RG  Y+E LG
Sbjct: 247 SLGCQKVLIFLAEKDMLRDRGWFYYETLG 275


>gb|ABB89010.1| CXE carboxylesterase [Malus pumila]
          Length = 371

 Score =  289 bits (739), Expect = 2e-75
 Identities = 157/334 (47%), Positives = 201/334 (60%), Gaps = 13/334 (3%)
 Frame = +3

Query: 144  ADDIVFEYPPFIRVYKDGRKERLREDVFVAASVDPSTGVSSKDVVIQPETGLSARMYLPK 323
            ++++  ++ PF+++YKDGR ERL     V  S+DP TGV  KD VI  ETG+SAR+Y+PK
Sbjct: 57   SNEVAQDFSPFLKIYKDGRVERLSGTDVVPTSLDPQTGVECKDAVISAETGVSARLYIPK 116

Query: 324  G--ANPKTKLPLVIYYHGGGFCIESAFCPTYHNYLNLLVSKANVVAVSVDYRRAPEYPLP 497
                   TKLPL+IYYHGGGFC+ S FC  YHNYL  LV++ANVVAVSVDYR+APE PLP
Sbjct: 117  TKITTNSTKLPLLIYYHGGGFCMGSPFCAYYHNYLTTLVAEANVVAVSVDYRKAPENPLP 176

Query: 498  IAYEDSWTALKWVFSHPD----EEWLTKYADYDRVYMAGDSAGGNISHNMAVR-AHIEPN 662
            + Y+DSW AL WV SH +    EEWL  YAD++RV+ AGDSAG NI+H+MAVR  H    
Sbjct: 177  LGYDDSWAALGWVQSHIEGQGPEEWLNSYADFERVFFAGDSAGANIAHHMAVRLGHEGLV 236

Query: 663  NFKFKGIVLAHPYFIGSTPLASEGDMDLLGK------LWLAVYPTTSGLDDPLVNPFKDP 824
                KGI+L HPYF GS P+  EG+ D++        +W   YPTTSG DD L+NP KDP
Sbjct: 237  GVNLKGIILVHPYFWGSEPI--EGETDVVENRARAEAIWRFAYPTTSGADDLLINPGKDP 294

Query: 825  NFSKVACKRVLVCVAGLDVLVHRGKHYHENLGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1004
              SK+  +RVLVCVA  D L  RG +Y + L                             
Sbjct: 295  KLSKLGAERVLVCVAEQDALRQRGWYYSDLL--------------------RKSEWGGNV 334

Query: 1005 XXXXXXXXXXXFHVSTPEIENASKLMEQVVAFLN 1106
                       FH++ P  +NA  L+ ++ +FLN
Sbjct: 335  EVVESKEEDHVFHLNNPVGDNAVALLMKIASFLN 368


>ref|XP_003608006.1| Gibberellin receptor GID1 [Medicago truncatula]
            gi|355509061|gb|AES90203.1| Gibberellin receptor GID1
            [Medicago truncatula]
          Length = 320

 Score =  283 bits (723), Expect = 1e-73
 Identities = 151/332 (45%), Positives = 197/332 (59%), Gaps = 10/332 (3%)
 Frame = +3

Query: 138  TTADDIVFEYPPFIRVYKDGRKERLREDVFVAASVDPSTGVSSKDVVIQPETGLSARMYL 317
            T  D+I  + PP +RVYK GR E L  + F+  S+D +T V SKDVVI  E  +SAR+++
Sbjct: 6    TINDEIAIDIPPILRVYKSGRVENLIGEEFLPPSLDQATNVESKDVVISEEHNISARLFI 65

Query: 318  PKGANPKT-KLPLVIYYHGGGFCIESAFCPTYHNYLNLLVSKANVVAVSVDYRRAPEYPL 494
            PK  +P   KLP+ +Y+HGGGFCIE+ F P YHNYLN + S ANV+ VSV YRRAPEYP+
Sbjct: 66   PKTNHPPIQKLPVFVYFHGGGFCIETPFSPCYHNYLNSVTSLANVIGVSVHYRRAPEYPV 125

Query: 495  PIAYEDSWTALKWVFSH----PDEEWLTKYADYDRVYMAGDSAGGNISHNMAVRAHIEP- 659
            PIA+EDSW ALKWV SH      +EWL +YAD+++V++ GDSAG NISH + +R   E  
Sbjct: 126  PIAHEDSWLALKWVASHVGGNGSDEWLNQYADFEKVFLGGDSAGANISHYLGIRVGKENL 185

Query: 660  NNFKFKGIVLAHPYFIGSTPLASEGDM----DLLGKLWLAVYPTTSGLDDPLVNPFKDPN 827
            +  K +G V  HPYF G   + SE +M    + +  LW    PTT+G DDPL+NP  DP+
Sbjct: 186  DGVKLEGSVYIHPYFWGVDLIGSESNMAEFVEKIHNLWRFSCPTTTGSDDPLINPANDPD 245

Query: 828  FSKVACKRVLVCVAGLDVLVHRGKHYHENLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1007
              K+ CKR+LVCVAG D+L  RG +Y E L                              
Sbjct: 246  LGKLGCKRLLVCVAGKDILRDRGLYYKELL--------------------EKSGWGGVVE 285

Query: 1008 XXXXXXXXXXFHVSTPEIENASKLMEQVVAFL 1103
                      FH+  P  ENA  L+ QVV+F+
Sbjct: 286  VVEIEDEGHIFHLFKPSCENAMALLNQVVSFI 317


Top