BLASTX nr result

ID: Coptis25_contig00000177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000177
         (2566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25055.3| unnamed protein product [Vitis vinifera]              246   3e-62
ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251...   246   3e-62
ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-58
ref|XP_002520955.1| cyclophilin, putative [Ricinus communis] gi|...   231   7e-58
emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]   231   7e-58

>emb|CBI25055.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  246 bits (627), Expect = 3e-62
 Identities = 131/210 (62%), Positives = 147/210 (70%)
 Frame = +1

Query: 40  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 219
           M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 220 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 399
           GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 400 SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 579
           SQFF+T K  PHLD            +DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121 SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 580 FNXXXXXXXXXXXXXXXXXXSFSDDSSDEK 669
            +                    SDDSSDE+
Sbjct: 180 IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 64/218 (29%), Positives = 87/218 (39%), Gaps = 6/218 (2%)
 Frame = +1

Query: 982  TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQ----- 1146
            T S  S SDD+ A    SA     NS H E          KHP     +   ++Q     
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTE---------SKHPRNLGKKTGALEQDTITK 369

Query: 1147 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXX 1323
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+         
Sbjct: 370  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 428

Query: 1324 XXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYNRQTNXXXXXXXXXXXXXXXXX 1503
                  +                             R + + N                 
Sbjct: 429  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 488

Query: 1504 XXVAXXXXXXXXXXXPDGNPKRIRRGRGFTERYASARK 1617
               +           P+G PKRIR+GRGFT+R++ AR+
Sbjct: 489  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 526


>ref|XP_002280876.1| PREDICTED: uncharacterized protein LOC100251093 [Vitis vinifera]
          Length = 702

 Score =  246 bits (627), Expect = 3e-62
 Identities = 131/210 (62%), Positives = 147/210 (70%)
 Frame = +1

Query: 40  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 219
           M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 220 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 399
           GS FHRIIKGFM QGGDFSK +GTGGESI+GG+FADENFK +H   G LSMAN+G +TNG
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKRAHEGPGFLSMANSGPNTNG 120

Query: 400 SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 579
           SQFF+T K  PHLD            +DT+ +IE Q G+ DGKP  LVKIVDCGE SE K
Sbjct: 121 SQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKIE-QLGTGDGKPARLVKIVDCGETSENK 179

Query: 580 FNXXXXXXXXXXXXXXXXXXSFSDDSSDEK 669
            +                    SDDSSDE+
Sbjct: 180 IHGAVGTEKGRKKKSGKALS--SDDSSDEQ 207



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 62/212 (29%), Positives = 85/212 (40%)
 Frame = +1

Query: 982  TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQQKKDG 1161
            T S  S SDD+ A    SA     NS H E K   +    K     + +      QK   
Sbjct: 320  TSSSRSSSDDEKASHHVSAHKTS-NSTHTESKHPRNLDAGKKTGA-LEQDTITKPQKDHE 377

Query: 1162 LKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXXXXXXXY 1341
            LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+               
Sbjct: 378  LKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTPSPRRRA 436

Query: 1342 QXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYNRQTNXXXXXXXXXXXXXXXXXXXVAXX 1521
            +                             R + + N                    +  
Sbjct: 437  KISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATEPPASNH 496

Query: 1522 XXXXXXXXXPDGNPKRIRRGRGFTERYASARK 1617
                     P+G PKRIR+GRGFT+R++ AR+
Sbjct: 497  GRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 528


>ref|XP_002306802.1| predicted protein [Populus trichocarpa] gi|222856251|gb|EEE93798.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  231 bits (590), Expect = 6e-58
 Identities = 122/180 (67%), Positives = 134/180 (74%)
 Frame = +1

Query: 40  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 219
           M+K KNPLVFLDV IDG   E+I IELF+DVVP+TAENFRALCTGEKGTG  T K LH+K
Sbjct: 1   MSKKKNPLVFLDVSIDGDPAERIFIELFADVVPRTAENFRALCTGEKGTGKTTGKPLHYK 60

Query: 220 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 399
           GS FHRIIK FM QGGDFSK +GTGGESI+GG+FADENF L H  AG LSMAN+G +TNG
Sbjct: 61  GSSFHRIIKEFMAQGGDFSKGNGTGGESIYGGKFADENFILRHEGAGHLSMANSGPNTNG 120

Query: 400 SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 579
           SQFFITLK   HLD            MD V +IE Q GS  G+P   VKIVDCGE SE K
Sbjct: 121 SQFFITLKPQAHLDGKHVVFGKVVKGMDIVKKIE-QVGSARGQPARPVKIVDCGETSESK 179


>ref|XP_002520955.1| cyclophilin, putative [Ricinus communis]
           gi|223539792|gb|EEF41372.1| cyclophilin, putative
           [Ricinus communis]
          Length = 688

 Score =  231 bits (589), Expect = 7e-58
 Identities = 125/210 (59%), Positives = 140/210 (66%)
 Frame = +1

Query: 40  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 219
           M+K KNPLV+ DV IDG   E+IVIELF+DV PKTAENFRALCTGE G G  T K LH+K
Sbjct: 1   MSKKKNPLVYFDVSIDGDPVERIVIELFADVAPKTAENFRALCTGEMGIGKTTGKPLHYK 60

Query: 220 GSLFHRIIKGFMVQGGDFSKRDGTGGESIWGGRFADENFKLSHNEAGLLSMANAGKHTNG 399
           GS FHRIIKGFM QGGDFSK +GTGGESI+GG+F+DENF L H+ AG LSMAN+G +TNG
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFSDENFILKHDGAGFLSMANSGPNTNG 120

Query: 400 SQFFITLKATPHLDXXXXXXXXXXXXMDTVFRIEKQAGSEDGKPCCLVKIVDCGEGSEKK 579
           SQFFIT K  P LD            ++ V RIE Q G+ DGKP   VKIVDCGE SE K
Sbjct: 121 SQFFITFKRQPQLDRKHVVFGKVIKGIEVVKRIE-QLGTADGKPVHPVKIVDCGETSENK 179

Query: 580 FNXXXXXXXXXXXXXXXXXXSFSDDSSDEK 669
                                 SD SSDEK
Sbjct: 180 IQ--DTVGKDAGKKKKSGKVPLSDSSSDEK 207


>emb|CAN75764.1| hypothetical protein VITISV_034442 [Vitis vinifera]
          Length = 786

 Score =  231 bits (589), Expect = 7e-58
 Identities = 131/237 (55%), Positives = 147/237 (62%), Gaps = 27/237 (11%)
 Frame = +1

Query: 40  MAKSKNPLVFLDVVIDGGRPEKIVIELFSDVVPKTAENFRALCTGEKGTGSCTKKQLHFK 219
           M K KNPLVFLDV IDG   EKIVIELF+DVVPKTAENFRALCTGEKG G+ T K LH+K
Sbjct: 1   MTKKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGVGTSTGKPLHYK 60

Query: 220 GSLFHRIIKGFMVQGGDFSKRDG---------------------------TGGESIWGGR 318
           GS FHRIIKGFM QGGDFSK +G                           TGGESI+GG+
Sbjct: 61  GSFFHRIIKGFMAQGGDFSKGNGMCFLFPSSIASVDAYSLFDLYLNAQTCTGGESIYGGK 120

Query: 319 FADENFKLSHNEAGLLSMANAGKHTNGSQFFITLKATPHLDXXXXXXXXXXXXMDTVFRI 498
           FADENFK +H   G LSMAN+G +TNGSQFF+T K  PHLD            +DT+ +I
Sbjct: 121 FADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKI 180

Query: 499 EKQAGSEDGKPCCLVKIVDCGEGSEKKFNXXXXXXXXXXXXXXXXXXSFSDDSSDEK 669
           E Q G+ DGKP  LVKIVDCGE SE K +                    SDDSSDE+
Sbjct: 181 E-QLGTGDGKPARLVKIVDCGETSENKIHGAVGTEKGRKKKSGKALS--SDDSSDEQ 234



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 64/218 (29%), Positives = 87/218 (39%), Gaps = 6/218 (2%)
 Frame = +1

Query: 982  TDSGISESDDDVAHPQESAPAAFINSLHDEIKSSEDPAVDKHPPQPISRKADIDQ----- 1146
            T S  S SDD+ A    SA     NS H E          KHP     +   ++Q     
Sbjct: 386  TSSSRSSSDDEKASXHVSAHKTS-NSTHTE---------SKHPXNLGKKTGALEQDTIAK 435

Query: 1147 -QKKDGLKLAKDDSSHEEGEFAQEKGDHLNNGHDTEMKSDKIANKYPDSDNEXXXXXXXX 1323
             QK   LK+++DDSSHEEGEF+Q K + LNNGH TE KS+K A ++P SD+         
Sbjct: 436  PQKDHELKMSEDDSSHEEGEFSQ-KNELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTP 494

Query: 1324 XXXXXYQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRYNRQTNXXXXXXXXXXXXXXXXX 1503
                  +                             R + + N                 
Sbjct: 495  SPRRRAKISPRRNPSISPKKISTMSPRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATE 554

Query: 1504 XXVAXXXXXXXXXXXPDGNPKRIRRGRGFTERYASARK 1617
               +           P+G PKRIR+GRGFT+R++ AR+
Sbjct: 555  PPASNHGRGLSRSPSPNGAPKRIRKGRGFTDRFSFARR 592


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