BLASTX nr result

ID: Coptis25_contig00000169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000169
         (2501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632476.1| PREDICTED: homeobox-leucine zipper protein A...   300   1e-78
emb|CAN62215.1| hypothetical protein VITISV_008512 [Vitis vinifera]   292   3e-76
emb|CBI33148.3| unnamed protein product [Vitis vinifera]              288   4e-75
gb|ABK95942.1| unknown [Populus trichocarpa]                          287   8e-75
ref|XP_004143453.1| PREDICTED: homeobox-leucine zipper protein A...   282   4e-73

>ref|XP_003632476.1| PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Vitis
            vinifera]
          Length = 335

 Score =  300 bits (769), Expect = 1e-78
 Identities = 171/338 (50%), Positives = 214/338 (63%), Gaps = 18/338 (5%)
 Frame = -2

Query: 1786 MKRLGSSDSLGGVISMCPSTDEKTLGGKNSNLVYNRGFQSMXXXXXXXXXXXESGHVSEK 1607
            MKRLGSS+SLG ++++CP+TDE +     +N VY+R FQ+M           ESG + EK
Sbjct: 1    MKRLGSSESLGALMAICPTTDEHS---PRNNHVYSREFQTMFDGLDEEGCVEESGQIVEK 57

Query: 1606 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 1427
            KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD
Sbjct: 58   KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 117

Query: 1426 YGILKASYDSLKQNFEALQHDXXXXXXXXXXXKSKQREVNTDSNLSIKEEVLITESENKI 1247
            YGILKA+Y++LK N++A+QHD           KSK  E  T+SNLS+KEE++++ES+ K+
Sbjct: 118  YGILKANYETLKLNYDAIQHDNEALLKEIRELKSKLNEEKTESNLSVKEELVVSESDEKV 177

Query: 1246 SDQNKSSAAMLV-----EAENMDRNQDFYKTNNVVETTLYGDFKDGXXXXXXSAIFNEEN 1082
                +S  AM       +A+++  +  F   N     +++ D KDG      SAI NE+N
Sbjct: 178  KVMEQSETAMGAGVGGSDAKDLSNDDSFKDGNGGGRVSVFPDMKDGSSDSDSSAILNEDN 237

Query: 1081 --------NGV----XXXXXXXXXXXXXXXXXXXXXXXXXXFQFAD-SKTISASTQKPYQ 941
                    +GV                              F F+D S+    +TQK YQ
Sbjct: 238  SPNAAISSSGVLQNNHHHHLLMSPPSSSLRFNSSSSSSINCFHFSDSSRPTLGNTQKAYQ 297

Query: 940  HHQFIKMEEHNFFGTEEPCNFFSEEQAPTLQWYCPDQW 827
              QF+KMEEHNFFG +E CNFFS++Q PTL WYCPDQW
Sbjct: 298  -PQFVKMEEHNFFGADESCNFFSDDQPPTLPWYCPDQW 334


>emb|CAN62215.1| hypothetical protein VITISV_008512 [Vitis vinifera]
          Length = 345

 Score =  292 bits (748), Expect = 3e-76
 Identities = 172/348 (49%), Positives = 215/348 (61%), Gaps = 28/348 (8%)
 Frame = -2

Query: 1786 MKRLGSSDSLGGVISMCPSTDEKTLGGKNSNLVYNRGFQSMXXXXXXXXXXXESGHVSEK 1607
            MKRLGSS+SLG ++++CP+TDE +     +N VY+R FQ+M           ESG + EK
Sbjct: 1    MKRLGSSESLGALMAICPTTDEHS---PRNNHVYSREFQTMFDGLDEEGCVEESGQIVEK 57

Query: 1606 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 1427
            KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD
Sbjct: 58   KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 117

Query: 1426 YGILKASYDSLKQNFEALQH----------DXXXXXXXXXXXKSKQREVNTDSNLSIKEE 1277
            YGILKA+Y++LK N++A+QH          D           KSK  E  T+SNLS+KEE
Sbjct: 118  YGILKANYETLKLNYDAIQHDNEALLKEVWDILPTMRMIRELKSKLNEEKTESNLSVKEE 177

Query: 1276 VLITESENKISDQNKSSAAMLV-----EAENMDRNQDFYKTNNVVETTLYGDFKDGXXXX 1112
            ++++ES+ K+    +S  AM       +A+++  +  F   N     +++ D KDG    
Sbjct: 178  LVVSESDEKVKVMEQSETAMGAGVGGSDAKDLSNDDSFKDGNGGGRVSVFPDMKDGSSDS 237

Query: 1111 XXSAIFNEEN--------NGV----XXXXXXXXXXXXXXXXXXXXXXXXXXFQFAD-SKT 971
              SAI NE+N        +GV                              F F+D S+ 
Sbjct: 238  DSSAILNEDNSPNAAISSSGVLQNNHHHHLLMSPPSSSLRFNXSSSSSINCFHFSDSSRP 297

Query: 970  ISASTQKPYQHHQFIKMEEHNFFGTEEPCNFFSEEQAPTLQWYCPDQW 827
               +TQK YQ  QF+KMEEHNFFG +E CNFFS++Q PTL WYCPDQW
Sbjct: 298  XLGNTQKAYQ-PQFVKMEEHNFFGADESCNFFSDDQPPTLPWYCPDQW 344


>emb|CBI33148.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  288 bits (738), Expect = 4e-75
 Identities = 162/320 (50%), Positives = 197/320 (61%)
 Frame = -2

Query: 1786 MKRLGSSDSLGGVISMCPSTDEKTLGGKNSNLVYNRGFQSMXXXXXXXXXXXESGHVSEK 1607
            MKRLGSS+SLG ++++CP+TDE +     +N VY+R FQ+M           ESG + EK
Sbjct: 1    MKRLGSSESLGALMAICPTTDEHS---PRNNHVYSREFQTMFDGLDEEGCVEESGQIVEK 57

Query: 1606 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 1427
            KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD
Sbjct: 58   KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 117

Query: 1426 YGILKASYDSLKQNFEALQHDXXXXXXXXXXXKSKQREVNTDSNLSIKEEVLITESENKI 1247
            YGILKA+Y++LK N++A+QHD           KSK  E  T+SNLS+KEE++++ES+ K+
Sbjct: 118  YGILKANYETLKLNYDAIQHDNEALLKEIRELKSKLNEEKTESNLSVKEELVVSESDEKV 177

Query: 1246 SDQNKSSAAMLVEAENMDRNQDFYKTNNVVETTLYGDFKDGXXXXXXSAIFNEENNGVXX 1067
                +S  AM                       ++ D KDG      SAI NE+N+    
Sbjct: 178  KVMEQSETAM-----------------------VFPDMKDGSSDSDSSAILNEDNSPNAA 214

Query: 1066 XXXXXXXXXXXXXXXXXXXXXXXXFQFADSKTISASTQKPYQHHQFIKMEEHNFFGTEEP 887
                                               +TQK YQ  QF+KMEEHNFFG +E 
Sbjct: 215  ISSSGVLQNNHHHHLLIPTL--------------GNTQKAYQ-PQFVKMEEHNFFGADES 259

Query: 886  CNFFSEEQAPTLQWYCPDQW 827
            CNFFS++Q PTL WYCPDQW
Sbjct: 260  CNFFSDDQPPTLPWYCPDQW 279


>gb|ABK95942.1| unknown [Populus trichocarpa]
          Length = 328

 Score =  287 bits (735), Expect = 8e-75
 Identities = 167/331 (50%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
 Frame = -2

Query: 1786 MKR-LGSSDSLGGVISMCPSTDEKTLGGKNSNLVYNRGFQSMXXXXXXXXXXXESG-HVS 1613
            MKR LGSSDSLG ++S+CPS +E +   +N   VY+R FQSM           E+G HV+
Sbjct: 1    MKRSLGSSDSLGALMSICPSAEEHS--PRNHTHVYSREFQSMLDGLDEEGCVEEAGGHVT 58

Query: 1612 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 1433
            EKKRRLS DQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE
Sbjct: 59   EKKRRLSGDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118

Query: 1432 RDYGILKASYDSLKQNFEALQHDXXXXXXXXXXXKSKQREVNTDSNLSIKEEVLITESEN 1253
            RDYG+LKA+YDSLK NF+ALQHD           K+K  E N +SN+S+KEE+++ ESE+
Sbjct: 119  RDYGVLKANYDSLKHNFDALQHDNEALLKEIRELKAKLNEENAESNVSVKEEIILAESED 178

Query: 1252 KISDQNKSSAAMLVEA-ENMDRNQDFYKTNNVVE----TTLYGDFKDGXXXXXXSAIFNE 1088
            K+ +++  +    V A E  + N + +  ++ +      +L+ DFKDG      SAI NE
Sbjct: 179  KMPEEDTPALLDSVAASETKELNYETFNNHSSINIGLGASLFPDFKDGSSDSDSSAILNE 238

Query: 1087 ENNGVXXXXXXXXXXXXXXXXXXXXXXXXXXFQFADSKTISAST---QKPYQHHQFIKME 917
            +N+                               + S   S +     K YQ  QF+K+E
Sbjct: 239  DNSPNPAISSSGILQSQLMMSPPPSSSLRFNCSASSSSPSSMNCFQFSKSYQT-QFVKLE 297

Query: 916  EHNFFGTEEPCNFFSEEQAPTLQWYCPDQWN 824
            EHNFF +EE CNFFS+EQ P+L WY  DQWN
Sbjct: 298  EHNFFSSEEACNFFSDEQPPSLPWYSSDQWN 328


>ref|XP_004143453.1| PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis
            sativus] gi|449533808|ref|XP_004173863.1| PREDICTED:
            homeobox-leucine zipper protein ATHB-6-like [Cucumis
            sativus]
          Length = 324

 Score =  282 bits (721), Expect = 4e-73
 Identities = 164/340 (48%), Positives = 208/340 (61%), Gaps = 19/340 (5%)
 Frame = -2

Query: 1786 MKRLGSSDSLGGVISMCPSTDEKTLGGKNSNLVYNRGFQSMXXXXXXXXXXXESGHVSEK 1607
            MKR GSSDSLG ++S+CP+++E++   +NS+ VY R FQSM           E  HV EK
Sbjct: 1    MKRHGSSDSLGALMSVCPTSEEQS--PRNSH-VYGREFQSMLDGLDEEGSIEEHCHVGEK 57

Query: 1606 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 1427
            KRRLSVDQVKALEK FE+ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD
Sbjct: 58   KRRLSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERD 117

Query: 1426 YGILKASYDSLKQNFEALQHDXXXXXXXXXXXKSKQREVNTDSNLSIKEEVLITESENKI 1247
            YG+LKA+Y+SLK++F+ LQ D           KSK  E  T+SNLS+KEE+ ++ES+N +
Sbjct: 118  YGLLKANYESLKRSFDTLQQDNDALLKEIKELKSKLEEEKTESNLSVKEEIFVSESDNLL 177

Query: 1246 SDQNKSSAAM------LVEAENMDRNQDFYKT-------NNVVETTLYGDFKDGXXXXXX 1106
             +Q  +   +      +    + D N + ++T       +  VE +L+ DFKDG      
Sbjct: 178  IEQTTNHLPVDHISLPVASDHSDDFNYESFRTVGADDGDDQRVEVSLFTDFKDGSSDSDS 237

Query: 1105 SAIFNEENNGVXXXXXXXXXXXXXXXXXXXXXXXXXXFQFADSKTISASTQKPYQH---- 938
            SAI NE+N+                             Q   S   S +   P+Q     
Sbjct: 238  SAILNEDNS------------PNAVVSSATAGMLQSHHQILSSPATSLNCY-PFQKAAYN 284

Query: 937  --HQFIKMEEHNFFGTEEPCNFFSEEQAPTLQWYCPDQWN 824
               QF+K+EEHNFF  EE CN FS+EQAP++ WYCPDQWN
Sbjct: 285  NAQQFVKIEEHNFFSGEETCNLFSDEQAPSMHWYCPDQWN 324


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