BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000056
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|2...   235   3e-59
ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, ...   226   1e-56
ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, ...   211   3e-52
ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...   208   3e-51
ref|XP_002324716.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-51

>ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|222854246|gb|EEE91793.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  235 bits (599), Expect = 3e-59
 Identities = 133/263 (50%), Positives = 165/263 (62%), Gaps = 8/263 (3%)
 Frame = +2

Query: 653  EVPHMEGCNPHRQ---SGFSETVGKRAEGHMKSVLSLGTPDFILPTSQADYSQSLARIPY 823
            E+  M G N   Q   S   E+ GK  EG M+ VL L TPD +   SQAD S S+ R PY
Sbjct: 79   EMSAMGGTNSQGQCISSESDESCGKGVEGKMRPVLLLSTPDGVSNHSQADCSYSMVRTPY 138

Query: 824  SYPDPYFGGMLAPCAPQAIIHPPM----LGMTLSRVPLPLDPAEDEPIYVNPKQYRGILR 991
               DPYFGG+  P  P A I P M    +GMT  RVPLPLD A+D PIYVN KQY GILR
Sbjct: 139  PCADPYFGGLFNPYGPHAFIQPQMGSHMVGMTAGRVPLPLDLADDGPIYVNAKQYHGILR 198

Query: 992  RRESRAKLEAQNKLIKSRKPYLHESRHLHALKRVRGSGGRFLNTNKSQQSERSRSNGQ-K 1168
            RR+SRAKLEAQNKL+K+RKPYLHESRH+HAL RVRGSGGRFL+T K Q+S+ + S+GQ  
Sbjct: 199  RRQSRAKLEAQNKLVKNRKPYLHESRHIHALNRVRGSGGRFLSTKKLQRSDPTSSHGQCN 258

Query: 1169 AAERALLKLRGHKLESEVLQSETCNTGGSHTSCSETTSVSNGYGTLQMSDLRFSSYPSHT 1348
              +   L  + +  E E  QS T  +  S+T+ S+TTSVSN     +  D  FS   +H 
Sbjct: 259  VLDTIHLHPKNNASELESFQSRTGQSSASNTTRSDTTSVSNSDVNFRQPDRGFSGIAAHL 318

Query: 1349 NGPLLSDGAIMGNGSQYRVPVIR 1417
             G    +G +M +G+Q+   V+R
Sbjct: 319  VGGRQINGGLMSSGNQHHASVVR 341


>ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
            communis] gi|223539430|gb|EEF41020.1| Nuclear
            transcription factor Y subunit A-3, putative [Ricinus
            communis]
          Length = 335

 Score =  226 bits (577), Expect = 1e-56
 Identities = 129/243 (53%), Positives = 156/243 (64%), Gaps = 3/243 (1%)
 Frame = +2

Query: 695  GFSETVGKRAEGHMKSVLSLGTPDFILPTSQADYSQSLARIPYSYPDPYFGGMLAPCAPQ 874
            GF+E+  K   GH+K V  +GT DFI P SQ D SQS+AR+P  + +PYFGG+LA   PQ
Sbjct: 93   GFNESHEKAEGGHVKLVSLMGTQDFIFP-SQFDCSQSVARVPLHFTEPYFGGLLAAYGPQ 151

Query: 875  AIIH-PPMLGMTLSRVPLPLDPAEDEPIYVNPKQYRGILRRRESRAKLEAQNKLIKSRKP 1051
            ++IH P M GMT +RVPLP    EDEPI+VN KQY  ILRRR  RAKLEAQNKLIK+RKP
Sbjct: 152  SMIHHPQMFGMTSARVPLPPVFTEDEPIFVNAKQYAAILRRRRYRAKLEAQNKLIKARKP 211

Query: 1052 YLHESRHLHALKRVRGSGGRFLNTNKSQQSERSRSNGQKAAERALLKLRGHKLESEVLQS 1231
            YLHESRHLHAL+R RGSGGRFLN  K + S  + ++           L G+  ESEV   
Sbjct: 212  YLHESRHLHALRRARGSGGRFLNAKKLEDSNPTPASHGLDGAGTQFHLAGNISESEVHHP 271

Query: 1232 ETCNTGGSHTSCSETTSVSNGYGTL-QMSDLRFSSYPSHTNGPLLSDGAIM-GNGSQYRV 1405
            E    G S TSCS+ TS SN      Q ++ +FS YPSH  G +      M G GSQ+ V
Sbjct: 272  ENHRDGASTTSCSDVTSASNSDDIFQQQTEFKFSGYPSHFVGTMRGRSVGMHGGGSQHHV 331

Query: 1406 PVI 1414
             V+
Sbjct: 332  SVL 334


>ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
            communis] gi|223546530|gb|EEF48028.1| Nuclear
            transcription factor Y subunit A-3, putative [Ricinus
            communis]
          Length = 327

 Score =  211 bits (538), Expect = 3e-52
 Identities = 114/235 (48%), Positives = 148/235 (62%)
 Frame = +2

Query: 689  QSGFSETVGKRAEGHMKSVLSLGTPDFILPTSQADYSQSLARIPYSYPDPYFGGMLAPCA 868
            +SG  E+ GK AEG MK VL    P+     SQ D S+S+A  P  Y D YFG +  P  
Sbjct: 96   ESGEDESCGKNAEGRMKPVLLFSAPEISRNPSQTDNSRSMAHAPVPYADHYFGELFTPYG 155

Query: 869  PQAIIHPPMLGMTLSRVPLPLDPAEDEPIYVNPKQYRGILRRRESRAKLEAQNKLIKSRK 1048
            P+ I+   +LGMT +RV LPLD A+D PIYVN KQY GILRRR+SRAKLEA+NKL+K+RK
Sbjct: 156  PKDIMGSQILGMTAARVALPLDLADDGPIYVNAKQYHGILRRRQSRAKLEARNKLVKARK 215

Query: 1049 PYLHESRHLHALKRVRGSGGRFLNTNKSQQSERSRSNGQKAAERALLKLRGHKLESEVLQ 1228
            PYLHESRHLHAL RVRGSGGRFL+ NK QQ + + ++ ++    ++L L     ++E  Q
Sbjct: 216  PYLHESRHLHALNRVRGSGGRFLSKNKVQQLDANATSSRQGVSDSILHLHS---KNETSQ 272

Query: 1229 SETCNTGGSHTSCSETTSVSNGYGTLQMSDLRFSSYPSHTNGPLLSDGAIMGNGS 1393
             E C    +  SC++ TSVSNG    +  D  FS       G + + G  M +G+
Sbjct: 273  LENCPYSRTLKSCTDVTSVSNGDAIYRQQDHWFSGTAVRFGGGMQTSGGHMYSGT 327


>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
            vinifera]
          Length = 350

 Score =  208 bits (530), Expect = 3e-51
 Identities = 112/231 (48%), Positives = 142/231 (61%), Gaps = 3/231 (1%)
 Frame = +2

Query: 689  QSGFSETVGKRAEGH--MKSVLSLGTPDFILPTSQADYSQSLARIPYSYPDPYFGGMLAP 862
            +S   E+  KR EG   MK V  +  PD +   SQ DY  S+  + Y Y DPY GG++A 
Sbjct: 102  ESVHGESCEKRVEGQSQMKPVFFMANPDVVFNPSQVDYGHSVTHVAYPYADPYHGGLVAA 161

Query: 863  CAPQAIIHPPMLGMTLSRVPLPLDPAEDEPIYVNPKQYRGILRRRESRAKLEAQNKLIKS 1042
              P A+I P ++G+  +RVPLP D AED PI+VN KQY GILRRR+SRAK+EAQNKL+K+
Sbjct: 162  YGPHAVIQPQLVGIAPTRVPLPFDIAEDGPIFVNAKQYHGILRRRQSRAKMEAQNKLVKA 221

Query: 1043 RKPYLHESRHLHALKRVRGSGGRFLNTNKSQQSERSRSNG-QKAAERALLKLRGHKLESE 1219
            RKPYLHESRHLHAL RVRGSGGRFL+T K Q+ + + + G    +       +G   E E
Sbjct: 222  RKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCHSVSGSGHFHQKGDTTEYE 281

Query: 1220 VLQSETCNTGGSHTSCSETTSVSNGYGTLQMSDLRFSSYPSHTNGPLLSDG 1372
            V QS+T     S TS S+ TSVSN     +  + RFS    H  G +   G
Sbjct: 282  VHQSDTGKFVASTTSSSDVTSVSNSDVLFRQPEHRFSGMSPHMGGAMQGGG 332


>ref|XP_002324716.1| predicted protein [Populus trichocarpa] gi|222866150|gb|EEF03281.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  207 bits (526), Expect = 9e-51
 Identities = 115/232 (49%), Positives = 149/232 (64%), Gaps = 4/232 (1%)
 Frame = +2

Query: 734  MKSVLSLGTPDFILPTSQADYSQSLARIPYSYPDPYFGGMLAPCAPQAIIHPP----MLG 901
            MK VL L TPD +   SQAD S S+ R PY+  DPYFGG+  P    A I P     M+G
Sbjct: 1    MKPVLLLSTPDSVSNHSQADCSYSMVRAPYA--DPYFGGLCNPYELHAFIQPHLGSHMVG 58

Query: 902  MTLSRVPLPLDPAEDEPIYVNPKQYRGILRRRESRAKLEAQNKLIKSRKPYLHESRHLHA 1081
            MT  RVPLP+D A+D PIYVN KQYRGI+RRR+SRAKLEAQNKL+K+RKPYLHESRH+HA
Sbjct: 59   MTAGRVPLPVDLADDGPIYVNAKQYRGIIRRRQSRAKLEAQNKLVKNRKPYLHESRHIHA 118

Query: 1082 LKRVRGSGGRFLNTNKSQQSERSRSNGQKAAERALLKLRGHKLESEVLQSETCNTGGSHT 1261
            L RVRGSGGRFL+  K Q+S+ + S      +     ++    E E  QS T  +G S+T
Sbjct: 119  LNRVRGSGGRFLSKKKLQESDPTPSQ-CNVTDTIHSHVKNDASELESYQSGTGQSGASNT 177

Query: 1262 SCSETTSVSNGYGTLQMSDLRFSSYPSHTNGPLLSDGAIMGNGSQYRVPVIR 1417
            +CS+ TSVS    T +  + RFS   +H  G +  +  ++  G+Q+   V++
Sbjct: 178  TCSDITSVSYSNVTFRQPERRFSGIATHLGGGMEINSRLICRGTQHHTSVVQ 229