BLASTX nr result

ID: Coptis25_contig00000051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000051
         (2301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum cr...   533   e-149
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope...   529   e-147
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl...   528   e-147
ref|NP_001237572.1| cystathionine-gamma-synthase precursor [Glyc...   526   e-147
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ...   526   e-146

>gb|AAC19395.1| cystathionine gamma-synthase [Mesembryanthemum crystallinum]
          Length = 548

 Score =  533 bits (1373), Expect = e-149
 Identities = 280/455 (61%), Positives = 326/455 (71%), Gaps = 25/455 (5%)
 Frame = +2

Query: 77   ASCHARVLPTFECRSDPGN--------SKPEPNRXXXXXXXXXXXXVVGVNLYRFPPNFV 232
            +SC ARVLP FECR +P +         K  P                   + RFPPNFV
Sbjct: 6    SSCCARVLPPFECRPEPADFSTAAAKQEKNIPKSFFGGANGRLFSSSSSSLILRFPPNFV 65

Query: 233  RQLSNKARRNCSNIGVAQVVAASWSNNDKNGS----------------VAAVDSVTTDVN 364
            RQLS KARRNCSNIGVAQVVAASWSNN   G+                +AAVD V  D  
Sbjct: 66   RQLSTKARRNCSNIGVAQVVAASWSNNSDAGATSCGGVPAATAVDAAAIAAVDHVEIDGG 125

Query: 365  EVVA-VGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFT 541
             VV    DGG                         +  FL +DGS+A+HAGERLGRGI T
Sbjct: 126  AVVEDSNDGG--------VKELSSNNSNTLGLGDFRPPFLSSDGSVAIHAGERLGRGIVT 177

Query: 542  DGITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLF 721
            D ITTPVVNT+AY+FK + +LIDFKEGR  SFEYGRYGNPT+  LE KISALE AE+T+ 
Sbjct: 178  DAITTPVVNTSAYFFKKTADLIDFKEGRQTSFEYGRYGNPTSVVLEDKISALEGAESTIL 237

Query: 722  LASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQ 901
            LASGMCAS VLM ALV  GGHIVTTTDCYRKTRIFI+ +L P M ++ TVIDP DV GL+
Sbjct: 238  LASGMCASIVLMLALVPAGGHIVTTTDCYRKTRIFIETFL-PKMGITATVIDPADVEGLK 296

Query: 902  YALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGAD 1081
             ALD+NNV+LFFTESPTNP+LRCVDI+LVS+LCH KG+LVC+DGTFATP+NQKAL+LGAD
Sbjct: 297  SALDENNVTLFFTESPTNPFLRCVDIKLVSELCHKKGALVCIDGTFATPLNQKALALGAD 356

Query: 1082 IVLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLR 1261
             V++S TK+IGGHNDV+GGCISGS  +I+ IR  HHVLGG LNPNAAYL IRG+KTLHLR
Sbjct: 357  FVVHSMTKFIGGHNDVLGGCISGSKNLISTIRTFHHVLGGTLNPNAAYLMIRGMKTLHLR 416

Query: 1262 VKQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1366
            V+QQN+TAL MA++LEAHPK+  V+YPGLPSHP++
Sbjct: 417  VQQQNTTALRMAEILEAHPKVKHVYYPGLPSHPEH 451



 Score =  100 bits (250), Expect = 1e-18
 Identities = 47/58 (81%), Positives = 51/58 (87%)
 Frame = +3

Query: 1497 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1670
            SFGGCESIVDQPAIMSYWDL+   R  +GIKDNLVRFSFGVEDFEDLKAD+LQAL  +
Sbjct: 491  SFGGCESIVDQPAIMSYWDLSPSDRLKYGIKDNLVRFSFGVEDFEDLKADVLQALEAI 548


>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
            gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
            [Solanum lycopersicum]
          Length = 540

 Score =  529 bits (1363), Expect = e-147
 Identities = 279/454 (61%), Positives = 329/454 (72%), Gaps = 21/454 (4%)
 Frame = +2

Query: 68   MAVASCHARVLPTFECRSDP--GNSKPEPNRXXXXXXXXXXXX----VVGVN--LYRFPP 223
            MAV+S +AR  P+FECRS+P    S P P                  V G++  +YRFPP
Sbjct: 1    MAVSS-YARAFPSFECRSEPDFSGSLPHPKAGVRFSGKYNSGSNRSQVYGLSSLIYRFPP 59

Query: 224  NFVRQLSNKARRNCSNIGVAQVVAASWSNN-------------DKNGSVAAVDSVTTDVN 364
            NFVRQLS KARRNCSNIGVAQVVAASWSNN             D + S A      T  +
Sbjct: 60   NFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITTGD 119

Query: 365  EVVAVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTD 544
            E VAV +  DC                        ASFL +DGS+A+HAGERLGRGI TD
Sbjct: 120  EEVAVVENADCSDQNVQIKGSTGVKY---------ASFLNSDGSVAIHAGERLGRGIVTD 170

Query: 545  GITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFL 724
             ITTPVVNT+AY+F  + +LIDFKE R ASFEYGRYGNPTT  LE KISALE AE+TL +
Sbjct: 171  AITTPVVNTSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIV 230

Query: 725  ASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQY 904
            ASGMCASTV+  ALV  GGHIVTTTDCYRKTR+FI+  L P M ++ TVIDP D+  L+ 
Sbjct: 231  ASGMCASTVMFLALVPAGGHIVTTTDCYRKTRVFIETIL-PKMGITATVIDPADMGALEL 289

Query: 905  ALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADI 1084
            AL+Q  V LFFTESPTNP+LRCVDIELVSKLC  KG+LVC+DGTFATP+NQKAL+LGAD+
Sbjct: 290  ALNQKKVDLFFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 349

Query: 1085 VLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRV 1264
            V++SATK++GGHNDV+ GCISG  ++++ IR LHH+LGG LNPNAAYL IRG+KTLHLRV
Sbjct: 350  VVHSATKFLGGHNDVLAGCISGPEKLVSVIRNLHHILGGALNPNAAYLIIRGMKTLHLRV 409

Query: 1265 KQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1366
            +QQNSTAL MA++LEAHPK+  V+YPGLPSHP+Y
Sbjct: 410  QQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEY 443



 Score =  101 bits (251), Expect = 1e-18
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 1497 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1670
            SFGGCESIVDQPAIMSYWDL+Q  RA +GI DNLVRFSFGVEDFED+KAD+LQAL ++
Sbjct: 483  SFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI 540


>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
            vinifera]
          Length = 531

 Score =  528 bits (1361), Expect = e-147
 Identities = 282/451 (62%), Positives = 328/451 (72%), Gaps = 18/451 (3%)
 Frame = +2

Query: 68   MAVASCHARVLPTFECRSDP----GNSKPEP----NRXXXXXXXXXXXXVVGVN-----L 208
            MAV+SC  RV   FECRS+P    G  +PE      R            + G +     +
Sbjct: 1    MAVSSC-PRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLI 59

Query: 209  YRFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNDK-----NGSVAAVDSVTTDVNEVV 373
            +RFPPNFVRQLS KARRNCSNIGVAQVVAASWS +       + S AA  SV   V   V
Sbjct: 60   FRFPPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSV 119

Query: 374  AVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTDGIT 553
                G D                        KASFL  DG++ +HAGERLGRGI TD IT
Sbjct: 120  VESSGSDVQYEDLADE---------------KASFLGFDGTLTIHAGERLGRGIVTDAIT 164

Query: 554  TPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFLASG 733
            TPVVNT+AY+FK + ELIDFKE R ASFEYGRYGNPTT  LE KISALE AE+T+ +ASG
Sbjct: 165  TPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVIMASG 224

Query: 734  MCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQYALD 913
            MCASTV++ ALV  GGH+VTTTDCYR+TRIFI+ +L P + V VTVIDP D   L+ ALD
Sbjct: 225  MCASTVMLLALVPPGGHMVTTTDCYRRTRIFIETFL-PKLGVEVTVIDPADTEALKSALD 283

Query: 914  QNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADIVLN 1093
            +NNV+LFFTESPTNP+LRCVDIELVS+LCH KG+LVC+D TFATP+NQK LSLGAD+VL+
Sbjct: 284  KNNVTLFFTESPTNPFLRCVDIELVSELCHRKGALVCIDSTFATPLNQKTLSLGADLVLH 343

Query: 1094 SATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRVKQQ 1273
            SATKYI GHNDVI GCISGS ++++ IR LHHVLGGVLNPNAAYL IRG+KTLHLRV+QQ
Sbjct: 344  SATKYIAGHNDVIAGCISGSEKLVSTIRNLHHVLGGVLNPNAAYLIIRGMKTLHLRVQQQ 403

Query: 1274 NSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1366
            NSTAL MAK+LEAHPK+  V+YPGLPSHP++
Sbjct: 404  NSTALRMAKILEAHPKVKCVYYPGLPSHPEH 434



 Score =  103 bits (257), Expect = 2e-19
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = +3

Query: 1497 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1670
            SFGGCESIVDQPAIMSYWDL Q  RA +GI+DNLVRFSFGVEDFEDLKADILQAL ++
Sbjct: 474  SFGGCESIVDQPAIMSYWDLNQSERAKYGIQDNLVRFSFGVEDFEDLKADILQALESI 531


>ref|NP_001237572.1| cystathionine-gamma-synthase precursor [Glycine max]
            gi|4959932|gb|AAD34548.1|AF141602_1
            cystathionine-gamma-synthase precursor [Glycine max]
          Length = 536

 Score =  526 bits (1356), Expect = e-147
 Identities = 274/449 (61%), Positives = 329/449 (73%), Gaps = 16/449 (3%)
 Frame = +2

Query: 68   MAVASCHARVLPTFECRSDPGNSKPEPN-----RXXXXXXXXXXXXVVGVN--LYRFPPN 226
            MAV+S H R   TFECRSDP  S P P+     R              G++  + RFPPN
Sbjct: 1    MAVSSSHMRF--TFECRSDPDFSPPPPSFDNLRRRNFRSSADSGAAFHGISSLILRFPPN 58

Query: 227  FVRQLSNKARRNCSNIGVAQVVAASWSNNDKNGSVA---------AVDSVTTDVNEVVAV 379
            F RQLS KARRNCSNIGVAQ+VAASWSNN  N   A         A D+ T  +  VVA 
Sbjct: 59   FQRQLSTKARRNCSNIGVAQIVAASWSNNSDNSPAAGAPAPPAATATDAATVPLPVVVAA 118

Query: 380  GDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTDGITTP 559
             +                            +SFL +D S  +HA ERLGRGI TDGITTP
Sbjct: 119  NED-------VVVSAAADENGAVQLNSSSYSSFLKSDASKTIHAAERLGRGIETDGITTP 171

Query: 560  VVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFLASGMC 739
            VVNT+AY+FK + +LIDFKE R  S+EYGRYGNPTT  LE KISALE AE+T+ +ASGMC
Sbjct: 172  VVNTSAYFFKKTADLIDFKENRQVSYEYGRYGNPTTVVLEEKISALEGAESTVIMASGMC 231

Query: 740  ASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQYALDQN 919
            AS VL  ALV  GGH+VTTTDCYRKTRIFI+ +L P M ++ TVIDP DV  L+ AL+Q+
Sbjct: 232  ASVVLFMALVPAGGHLVTTTDCYRKTRIFIETFL-PKMGITTTVIDPADVGALESALEQH 290

Query: 920  NVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADIVLNSA 1099
            NVSLFFTESPTNP+LRCVDI+LVS+LCH KG+L+C+DGTFATP+NQKAL+LGAD++L+S 
Sbjct: 291  NVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSL 350

Query: 1100 TKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRVKQQNS 1279
            TKY+GGH+DV+GGCISGS++V+++IR LHHVLGG LNPNAAYLFIRG+KTLHLRV+QQNS
Sbjct: 351  TKYMGGHHDVLGGCISGSIKVVSQIRTLHHVLGGTLNPNAAYLFIRGMKTLHLRVQQQNS 410

Query: 1280 TALEMAKVLEAHPKIARVHYPGLPSHPDY 1366
            T + MAK+LEAHPK+ RV+YPGLPSHP++
Sbjct: 411  TGMRMAKLLEAHPKVKRVYYPGLPSHPEH 439



 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = +3

Query: 1497 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1670
            SFGGCESIVDQPAI+SYWDL Q  RA + I DNLVRFSFGVEDFEDLKAD+LQAL  +
Sbjct: 479  SFGGCESIVDQPAILSYWDLPQSERAKYKIYDNLVRFSFGVEDFEDLKADVLQALEAI 536


>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
          Length = 539

 Score =  526 bits (1354), Expect = e-146
 Identities = 277/454 (61%), Positives = 328/454 (72%), Gaps = 21/454 (4%)
 Frame = +2

Query: 68   MAVASCHARVLPTFECRSDP--GNSKPEPNRXXXXXXXXXXXX----VVGVN--LYRFPP 223
            MAV+S +AR  P+FECRS+P    S P P                  V G++  ++RFPP
Sbjct: 1    MAVSS-YARAFPSFECRSEPDFSGSLPHPKAGVRFSGKYNSGSNRSQVYGLSSLIFRFPP 59

Query: 224  NFVRQLSNKARRNCSNIGVAQVVAASWSNN-------------DKNGSVAAVDSVTTDVN 364
            NFVRQLS KARRNCSNIGVAQVVAASWSNN             D + S A      T  +
Sbjct: 60   NFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITAGD 119

Query: 365  EVVAVGDGGDCXXXXXXXXXXXXXXXXXXXXXXLKASFLCADGSIAVHAGERLGRGIFTD 544
            E VAV +  DC                        ASFL +DGS+A+HAGERLGRGI TD
Sbjct: 120  EEVAVVENADCNDQNVQITGTGVKY----------ASFLNSDGSVAIHAGERLGRGIVTD 169

Query: 545  GITTPVVNTTAYWFKNSDELIDFKEGRYASFEYGRYGNPTTESLERKISALEQAETTLFL 724
             ITTPVVNT+AY+F  + +LIDFKE R ASFEYGRYGNPTT  LE KISALE AE+TL +
Sbjct: 170  AITTPVVNTSAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIV 229

Query: 725  ASGMCASTVLMFALVEKGGHIVTTTDCYRKTRIFIQDYLVPNMDVSVTVIDPGDVNGLQY 904
            ASGMCASTV+  ALV  GGHIVTTTDCYRKTR+FI+  L P M ++ TVIDP D+  L+ 
Sbjct: 230  ASGMCASTVMFLALVPAGGHIVTTTDCYRKTRVFIETIL-PKMGITATVIDPADMGALEL 288

Query: 905  ALDQNNVSLFFTESPTNPYLRCVDIELVSKLCHSKGSLVCVDGTFATPVNQKALSLGADI 1084
             L+Q  V LFFTESPTNP+LRCVDIELVSKLC  KG+LVC+DGTFATP+NQKAL+LGAD+
Sbjct: 289  TLNQKKVDLFFTESPTNPFLRCVDIELVSKLCREKGALVCIDGTFATPLNQKALALGADL 348

Query: 1085 VLNSATKYIGGHNDVIGGCISGSMEVIAKIRKLHHVLGGVLNPNAAYLFIRGIKTLHLRV 1264
            V++SATK++GGHNDV+ GCISG  ++++ IR LHH+LGG LNPNAAYL IRG+KTLHLRV
Sbjct: 349  VVHSATKFLGGHNDVLAGCISGPEKLVSVIRNLHHILGGALNPNAAYLIIRGMKTLHLRV 408

Query: 1265 KQQNSTALEMAKVLEAHPKIARVHYPGLPSHPDY 1366
            +QQNSTAL MA++LEAHPK+  V+YPGLPSHP+Y
Sbjct: 409  QQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEY 442



 Score =  101 bits (251), Expect = 1e-18
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 1497 SFGGCESIVDQPAIMSYWDLTQDGRAMFGIKDNLVRFSFGVEDFEDLKADILQALATL 1670
            SFGGCESIVDQPAIMSYWDL+Q  RA +GI DNLVRFSFGVEDFED+KAD+LQAL ++
Sbjct: 482  SFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI 539


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