BLASTX nr result

ID: Coptis25_contig00000047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000047
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247...   107   1e-21
emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]   107   1e-21
ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
emb|CBI21533.3| unnamed protein product [Vitis vinifera]               97   1e-18

>ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera]
          Length = 3288

 Score =  107 bits (266), Expect = 1e-21
 Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
 Frame = -1

Query: 454 DQHKDVSFREFLFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWG--T*T 281
           +QHKD  FRE LFVSG+ G+TVHAFC  +   K  +  KS  E E  QG WVEWG  + +
Sbjct: 172 NQHKDTFFRELLFVSGNHGVTVHAFCQRE---KIREMTKSTLEGEFAQGMWVEWGPSSTS 228

Query: 280 LHKTHANRRANLYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYT 101
           +H     +  +   +  E  L       ++G  +  G+ ++ E S    T KKWL++F T
Sbjct: 229 VHYREVKKDDSWCCDAPEIVLDVNGSSGTKGSCNFCGKDRDDE-SARSLTSKKWLRSFLT 287

Query: 100 KVEIVELEGDFCTRFPVKSSYPSSVEIVSFSMF 2
             E V+ EG+  TRFP K SYP S ++VSFS+F
Sbjct: 288 TAETVKSEGNIWTRFPEKPSYPCSAKVVSFSIF 320


>emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]
          Length = 995

 Score =  107 bits (266), Expect = 1e-21
 Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
 Frame = -1

Query: 454 DQHKDVSFREFLFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWG--T*T 281
           +QHKD  FRE LFVSG+ G+TVHAFC  +   K  +  KS  E E  QG WVEWG  + +
Sbjct: 172 NQHKDTFFRELLFVSGNHGVTVHAFCQRE---KIREMTKSTLEGEFAQGMWVEWGPSSTS 228

Query: 280 LHKTHANRRANLYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYT 101
           +H     +  +   +  E  L       ++G  +  G+ ++ E S    T KKWL++F T
Sbjct: 229 VHYREVKKDDSWCCDAPEIVLDVNGSSGTKGSCNFCGKDRDDE-SARSLTSKKWLRSFLT 287

Query: 100 KVEIVELEGDFCTRFPVKSSYPSSVEIVSFSMF 2
             E V+ EG+  TRFP K SYP S ++VSFS+F
Sbjct: 288 TAETVKSEGNIWTRFPEKPSYPCSAKVVSFSIF 320


>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score =  104 bits (260), Expect = 6e-21
 Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
 Frame = -1

Query: 454 DQHKDVSFREFLFVSGDRGITVHAFCH--IDGTHKRHQNVKSLPEDEVGQGRWVEWGT*T 281
           +QHK+ SFREFLFVS   G+TVHAF    IDG        K+  EDE GQGRWV+WG  +
Sbjct: 145 NQHKEASFREFLFVSSSNGVTVHAFRKPDIDGG-----TTKTALEDEFGQGRWVDWGPSS 199

Query: 280 LHKTHANRRAN--LYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTF 107
               +   R +  L        +       + G   D+ +    +  +     K+WL++F
Sbjct: 200 TPAQNLKDRGSSGLCSEGTSTVVADDRANGNRGSLQDIDKESGADELLRGVASKRWLRSF 259

Query: 106 YTKVEIVELEGDFCTRFPVKSSYPSSVEIVSFSMF 2
             KV+ ++ EG+  TRFP K+S+P S E+VSFS+F
Sbjct: 260 SIKVKTIKSEGNIWTRFPEKASFPGSAEVVSFSVF 294


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
 Frame = -1

Query: 454 DQHKDVSFREFLFVSGDRGITVHAFCH--IDGTHKRHQNVKSLPEDEVGQGRWVEWGT*T 281
           +QHK+ SFREFLFVS   G+TVHAF    IDG        KS  E E GQGRWV+WG  +
Sbjct: 140 NQHKEASFREFLFVSSSDGVTVHAFRKPDIDGG-----TTKSALEGEFGQGRWVDWGPSS 194

Query: 280 LHKTHANRR--ANLYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTF 107
           +       +  ++         +  +    + G   D+ +    +        K+WL++F
Sbjct: 195 MPAQFLKVQDSSSSCSESTSTVMADERANGNRGSLLDMDKESGPDELSKGVASKRWLRSF 254

Query: 106 YTKVEIVELEGDFCTRFPVKSSYPSSVEIVSFSMF 2
           + +VE ++ EG+  TRFP K+S+P S E+VSFS+F
Sbjct: 255 FIEVETIKSEGNIWTRFPEKTSFPCSAEVVSFSVF 289


>emb|CBI21533.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/151 (39%), Positives = 71/151 (47%)
 Frame = -1

Query: 454 DQHKDVSFREFLFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWGT*TLH 275
           +QHKD  FRE LFVSG+ G+TVHAFC      K  +  KS  E E  QG WVEWG     
Sbjct: 132 NQHKDTFFRELLFVSGNHGVTVHAFCQ---REKIREMTKSTLEGEFAQGMWVEWG----- 183

Query: 274 KTHANRRANLYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKV 95
                                   P S     D         S    T KKWL++F T  
Sbjct: 184 ------------------------PSSTSDRDDE--------SARSLTSKKWLRSFLTTA 211

Query: 94  EIVELEGDFCTRFPVKSSYPSSVEIVSFSMF 2
           E V+ EG+  TRFP K SYP S ++VSFS+F
Sbjct: 212 ETVKSEGNIWTRFPEKPSYPCSAKVVSFSIF 242


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