BLASTX nr result

ID: Coptis25_contig00000046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000046
         (4562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20950.3| unnamed protein product [Vitis vinifera]              479   e-132
ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger d...   479   e-132
ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|1...   477   e-131
gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]      473   e-130
ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger d...   467   e-128

>emb|CBI20950.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  479 bits (1232), Expect = e-132
 Identities = 208/265 (78%), Positives = 228/265 (86%), Gaps = 2/265 (0%)
 Frame = +2

Query: 3179 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 3352
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I  ++  RHD
Sbjct: 30   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 89

Query: 3353 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 3532
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 90   IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 149

Query: 3533 XXXXENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 3712
                ENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 150  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 209

Query: 3713 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 3892
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 210  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 269

Query: 3893 SEVQFHVVAQKCLSCNSYNTRQTRG 3967
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 270  SKVHFHVLAQKCLNCKSYNTRQTRG 294


>ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 [Vitis vinifera] gi|147785653|emb|CAN68688.1|
            hypothetical protein VITISV_029477 [Vitis vinifera]
          Length = 315

 Score =  479 bits (1232), Expect = e-132
 Identities = 208/265 (78%), Positives = 228/265 (86%), Gaps = 2/265 (0%)
 Frame = +2

Query: 3179 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 3352
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I  ++  RHD
Sbjct: 51   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 110

Query: 3353 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 3532
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 111  IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 170

Query: 3533 XXXXENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 3712
                ENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 171  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 230

Query: 3713 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 3892
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 231  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 290

Query: 3893 SEVQFHVVAQKCLSCNSYNTRQTRG 3967
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 291  SKVHFHVLAQKCLNCKSYNTRQTRG 315


>ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|118485648|gb|ABK94674.1|
            unknown [Populus trichocarpa] gi|222855556|gb|EEE93103.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  477 bits (1227), Expect = e-131
 Identities = 205/261 (78%), Positives = 229/261 (87%)
 Frame = +2

Query: 3182 DVNTTERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPR 3361
            +V T + L++G M+YGC HYRRRCRIRAPCCNE+FDCRHCHNEAKNNIN ++K RHD+PR
Sbjct: 39   NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 98

Query: 3362 HEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXX 3541
            HEV+QVICSLCGTEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHC+         
Sbjct: 99   HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCDGCGICRIGG 158

Query: 3542 XENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNC 3721
             ENFFHCYKCGCCYS  L+NSHPCVEGAMHHDCPVCFE+LFESR D+TV+PCGHTIH +C
Sbjct: 159  PENFFHCYKCGCCYSNLLKNSHPCVEGAMHHDCPVCFEFLFESRYDVTVLPCGHTIHESC 218

Query: 3722 LKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEV 3901
            LKEMR H QYACPLCSKSVCDMSKVWEK DMEIAATPMPE Y +K VWILCNDCG +SEV
Sbjct: 219  LKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSEV 278

Query: 3902 QFHVVAQKCLSCNSYNTRQTR 3964
            QFHVVAQKC++C SYNTRQTR
Sbjct: 279  QFHVVAQKCMNCKSYNTRQTR 299


>gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]
          Length = 305

 Score =  473 bits (1217), Expect = e-130
 Identities = 204/255 (80%), Positives = 226/255 (88%)
 Frame = +2

Query: 3197 ERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQ 3376
            ERL++G MQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKN+IN +R+ RHD+PR ++QQ
Sbjct: 51   ERLDEGLMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNSINVDRRKRHDMPRQQLQQ 110

Query: 3377 VICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFF 3556
            VICSLCGTEQEV QVC+NCGVCMGKYFC TCK +DDD S+ QYHCN          ENFF
Sbjct: 111  VICSLCGTEQEVRQVCINCGVCMGKYFCATCKLFDDDVSKQQYHCNGCGICRIGGRENFF 170

Query: 3557 HCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMR 3736
            HCY+CGCCYS  L+NSH CVEGAMHHDCPVCFEYLFESR D++V+PCGHTIH++CLKEMR
Sbjct: 171  HCYRCGCCYSTILKNSHACVEGAMHHDCPVCFEYLFESRYDVSVLPCGHTIHVHCLKEMR 230

Query: 3737 QHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVV 3916
            +HLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPES+ +K V ILCNDCGATS+VQFHVV
Sbjct: 231  EHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESFQNKMVRILCNDCGATSQVQFHVV 290

Query: 3917 AQKCLSCNSYNTRQT 3961
            AQKC  C SYNTRQT
Sbjct: 291  AQKCQKCKSYNTRQT 305


>ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1-like [Cucumis sativus] gi|449505475|ref|XP_004162482.1|
            PREDICTED: RING finger and CHY zinc finger
            domain-containing protein 1-like [Cucumis sativus]
          Length = 307

 Score =  467 bits (1201), Expect = e-128
 Identities = 198/255 (77%), Positives = 223/255 (87%)
 Frame = +2

Query: 3203 LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQVI 3382
            L + +MQ+GC+HYRRRCRIRAPCCNEIFDCRHCHNE KN+I  ++K RH++PRHEV QVI
Sbjct: 53   LEREYMQHGCAHYRRRCRIRAPCCNEIFDCRHCHNEIKNSICVDQKERHEIPRHEVNQVI 112

Query: 3383 CSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFFHC 3562
            CSLCGTEQEV Q C+NCGVC GKYFC++CK +DDDTS+ QYHCN          ENFFHC
Sbjct: 113  CSLCGTEQEVRQDCINCGVCFGKYFCESCKLFDDDTSKKQYHCNGCGICRIGGRENFFHC 172

Query: 3563 YKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMRQH 3742
            +KCGCCYS+ L+NSHPCVEGAMHHDCPVCFEYLF+S ND+TVMPCGHTIH NCLKEMR H
Sbjct: 173  HKCGCCYSILLKNSHPCVEGAMHHDCPVCFEYLFDSTNDVTVMPCGHTIHQNCLKEMRDH 232

Query: 3743 LQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVVAQ 3922
             QYACPLCSKSVCDMSKVWEK+DMEIAATP+PE Y +K VWILCNDCG TS+VQ+HVVAQ
Sbjct: 233  FQYACPLCSKSVCDMSKVWEKIDMEIAATPIPEPYQNKMVWILCNDCGKTSKVQYHVVAQ 292

Query: 3923 KCLSCNSYNTRQTRG 3967
            KCL+C SYNTRQTRG
Sbjct: 293  KCLNCKSYNTRQTRG 307


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