BLASTX nr result
ID: Coptis25_contig00000046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00000046 (4562 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20950.3| unnamed protein product [Vitis vinifera] 479 e-132 ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger d... 479 e-132 ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|1... 477 e-131 gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus] 473 e-130 ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger d... 467 e-128 >emb|CBI20950.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 479 bits (1232), Expect = e-132 Identities = 208/265 (78%), Positives = 228/265 (86%), Gaps = 2/265 (0%) Frame = +2 Query: 3179 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 3352 D V TE+ L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I ++ RHD Sbjct: 30 DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 89 Query: 3353 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 3532 +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN Sbjct: 90 IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 149 Query: 3533 XXXXENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 3712 ENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH Sbjct: 150 IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 209 Query: 3713 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 3892 NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T Sbjct: 210 QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 269 Query: 3893 SEVQFHVVAQKCLSCNSYNTRQTRG 3967 S+V FHV+AQKCL+C SYNTRQTRG Sbjct: 270 SKVHFHVLAQKCLNCKSYNTRQTRG 294 >ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Vitis vinifera] gi|147785653|emb|CAN68688.1| hypothetical protein VITISV_029477 [Vitis vinifera] Length = 315 Score = 479 bits (1232), Expect = e-132 Identities = 208/265 (78%), Positives = 228/265 (86%), Gaps = 2/265 (0%) Frame = +2 Query: 3179 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHD 3352 D V TE+ L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I ++ RHD Sbjct: 51 DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 110 Query: 3353 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 3532 +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN Sbjct: 111 IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 170 Query: 3533 XXXXENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 3712 ENFFHCYKC CCYSV L+NSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH Sbjct: 171 IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 230 Query: 3713 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 3892 NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T Sbjct: 231 QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 290 Query: 3893 SEVQFHVVAQKCLSCNSYNTRQTRG 3967 S+V FHV+AQKCL+C SYNTRQTRG Sbjct: 291 SKVHFHVLAQKCLNCKSYNTRQTRG 315 >ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|118485648|gb|ABK94674.1| unknown [Populus trichocarpa] gi|222855556|gb|EEE93103.1| predicted protein [Populus trichocarpa] Length = 300 Score = 477 bits (1227), Expect = e-131 Identities = 205/261 (78%), Positives = 229/261 (87%) Frame = +2 Query: 3182 DVNTTERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPR 3361 +V T + L++G M+YGC HYRRRCRIRAPCCNE+FDCRHCHNEAKNNIN ++K RHD+PR Sbjct: 39 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 98 Query: 3362 HEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXX 3541 HEV+QVICSLCGTEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHC+ Sbjct: 99 HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCDGCGICRIGG 158 Query: 3542 XENFFHCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNC 3721 ENFFHCYKCGCCYS L+NSHPCVEGAMHHDCPVCFE+LFESR D+TV+PCGHTIH +C Sbjct: 159 PENFFHCYKCGCCYSNLLKNSHPCVEGAMHHDCPVCFEFLFESRYDVTVLPCGHTIHESC 218 Query: 3722 LKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEV 3901 LKEMR H QYACPLCSKSVCDMSKVWEK DMEIAATPMPE Y +K VWILCNDCG +SEV Sbjct: 219 LKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSEV 278 Query: 3902 QFHVVAQKCLSCNSYNTRQTR 3964 QFHVVAQKC++C SYNTRQTR Sbjct: 279 QFHVVAQKCMNCKSYNTRQTR 299 >gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus] Length = 305 Score = 473 bits (1217), Expect = e-130 Identities = 204/255 (80%), Positives = 226/255 (88%) Frame = +2 Query: 3197 ERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQ 3376 ERL++G MQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKN+IN +R+ RHD+PR ++QQ Sbjct: 51 ERLDEGLMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNSINVDRRKRHDMPRQQLQQ 110 Query: 3377 VICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFF 3556 VICSLCGTEQEV QVC+NCGVCMGKYFC TCK +DDD S+ QYHCN ENFF Sbjct: 111 VICSLCGTEQEVRQVCINCGVCMGKYFCATCKLFDDDVSKQQYHCNGCGICRIGGRENFF 170 Query: 3557 HCYKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMR 3736 HCY+CGCCYS L+NSH CVEGAMHHDCPVCFEYLFESR D++V+PCGHTIH++CLKEMR Sbjct: 171 HCYRCGCCYSTILKNSHACVEGAMHHDCPVCFEYLFESRYDVSVLPCGHTIHVHCLKEMR 230 Query: 3737 QHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVV 3916 +HLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPES+ +K V ILCNDCGATS+VQFHVV Sbjct: 231 EHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESFQNKMVRILCNDCGATSQVQFHVV 290 Query: 3917 AQKCLSCNSYNTRQT 3961 AQKC C SYNTRQT Sbjct: 291 AQKCQKCKSYNTRQT 305 >ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Cucumis sativus] gi|449505475|ref|XP_004162482.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like [Cucumis sativus] Length = 307 Score = 467 bits (1201), Expect = e-128 Identities = 198/255 (77%), Positives = 223/255 (87%) Frame = +2 Query: 3203 LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINYERKLRHDLPRHEVQQVI 3382 L + +MQ+GC+HYRRRCRIRAPCCNEIFDCRHCHNE KN+I ++K RH++PRHEV QVI Sbjct: 53 LEREYMQHGCAHYRRRCRIRAPCCNEIFDCRHCHNEIKNSICVDQKERHEIPRHEVNQVI 112 Query: 3383 CSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFFHC 3562 CSLCGTEQEV Q C+NCGVC GKYFC++CK +DDDTS+ QYHCN ENFFHC Sbjct: 113 CSLCGTEQEVRQDCINCGVCFGKYFCESCKLFDDDTSKKQYHCNGCGICRIGGRENFFHC 172 Query: 3563 YKCGCCYSVHLRNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMRQH 3742 +KCGCCYS+ L+NSHPCVEGAMHHDCPVCFEYLF+S ND+TVMPCGHTIH NCLKEMR H Sbjct: 173 HKCGCCYSILLKNSHPCVEGAMHHDCPVCFEYLFDSTNDVTVMPCGHTIHQNCLKEMRDH 232 Query: 3743 LQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVVAQ 3922 QYACPLCSKSVCDMSKVWEK+DMEIAATP+PE Y +K VWILCNDCG TS+VQ+HVVAQ Sbjct: 233 FQYACPLCSKSVCDMSKVWEKIDMEIAATPIPEPYQNKMVWILCNDCGKTSKVQYHVVAQ 292 Query: 3923 KCLSCNSYNTRQTRG 3967 KCL+C SYNTRQTRG Sbjct: 293 KCLNCKSYNTRQTRG 307